Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
894
datasets available to search
ShareScore release 0.9.0
Dataset results
894 results for “Single-cell RNA-seq”
A single-cell RNA-seq dataset of synovial fluid from rheumatoid arthritis treated with TNF-α/JAK inhibitor
GEO Series GSE296117. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq and ATAC-seq of zebrafish retina
GEO Series GSE150839. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Development of activation-induced marker assay to identify HCV-specific T cells for single-cell RNA-seq analysis.
GEO Series GSE273224. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq: INCB059872 in wild-type murine bone marrow
GEO Series GSE145279. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of fly glia
GEO Series GSE168572. Drosophila melanogaster. 3064 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis of IDH-wildtype glioblastoma in radiation time course
GEO Series GSE162931. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq reveals the urothelium and stroma cell heterogeneity in acute and chronic injured urinary bladder by single-cell analysis
GEO Series GSE164557. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization [RNA-seq]
GEO Series GSE113983. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of control and Sendai virus-infected mouse lungs [2wk timpoint]
GEO Series GSE144678. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Tumor cells in light-chain amyloidosis and multiple myeloma show different transcriptional rewiring of the normal plasma cell development [single-cell RNA-seq]
GEO Series GSE175385. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Microglia-specific overexpression of alpha-Synuclein leads to severe dopaminergic neurodegeneration by phagocytic exhaustion and oxidative toxicity [single-cell RNA-Seq]
GEO Series GSE157534. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Smartseq3 Single-cell RNA-seq analysis of acutely FACS-purified tdTomato+ astrocyte derived cells from aged injured mice in vivo
GEO Series GSE220479. Mus musculus. 270 samples. Type: Expression profiling by high throughput sequencing.
E14.5 pancreatic islet single-cell RNA-seq [wt]
GEO Series GSE117616. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Integrative Single-Cell RNA-Seq and ATAC-Seq Identifies Transcriptional and Epigenetic Blueprint Guiding Osteoclastogenic Trajectory [scRNA-seq]
GEO Series GSE288653. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptional profiling identifies a spectrum of unconventional intraepithelial T lineage cells in human cord blood [bulk RNA-Seq]
GEO Series GSE201808. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-Seq (scRNA-Seq) of mouse basal cell carcinoma (BCC)
GEO Series GSE186183. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analyses reveal increasing intratumoral heterogeneity as an essential component of treatment resistance in small cell lung cancer [RNA-Seq]
GEO Series GSE138267. Homo sapiens. 25 samples. Type: Expression profiling by high throughput sequencing.
Bulk RNA sequencing data of rice root sections for Single-cell RNA-seq developmental stage annotation
GEO Series GSE260671. Oryza sativa. 30 samples. Type: Expression profiling by high throughput sequencing.
Sensitive, high-throughput single-cell RNA-Seq reveals within-clonal transcript-correlations in yeast populations
GEO Series GSE122392. Saccharomyces cerevisiae. 175 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of femoral bone cells reveals cellular heterogeneity and molecular mechanisms of chronic intermittent hypoxia-induced bone growth impairment
GEO Series GSE304165. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.