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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial Transcriptomic Profiling of the Mouse Adrenal Gland and Adjacent Adipose Tissue
GEO Series GSE283302. Mus musculus. 1 samples. Type: Other.
Identification of TREM1+CD163+ myeloid cells as a deleterious immune subset in HCC [Spatial Transcriptomics]
GEO Series GSE245908. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics [FluidigmC1_scATACseq]
GEO Series GSE141580. Drosophila melanogaster. 384 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spatial transcriptomic data of salivary gland tumors in AFAP family
GEO Series GSE303290. Homo sapiens. 28 samples. Type: Other.
Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics
GEO Series GSE158328. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial Transcriptomics of Developing Wheat Seed Reveals Concentric Gene Expression Zones and Subgenome Biased Expression of Key Genes
GEO Series GSE298021. Triticum aestivum. 3 samples. Type: Other.
Spatial transcriptome profiling by MERFISH reveals fetal liver hematopoietic stem cell niche architecture [bulk RNA-seq]
GEO Series GSE172128. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptome sequencing of the human corpus cavernosum with normal erectile function
GEO Series GSE261085. Homo sapiens. 1 samples. Type: Other.
Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC
GEO Series GSE280634. Homo sapiens. 8 samples. Type: Other.
Spatially resolved whole transcriptome profiling in human and mouse tissue using Digital Spatial Profiling
GEO Series GSE190089. Homo sapiens; Mus musculus. 871 samples. Type: Expression profiling by high throughput sequencing; Other.
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis
GEO Series GSE103239. Homo sapiens. 465 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of gastric cancers (Visium 10X platform)
GEO Series GSE251950. Homo sapiens. 10 samples. Type: Other.
Spatial transcriptomic in synovial tissue of psoriasis (Ps) and psoriatic arthritis (PsA) humanized mice.
GEO Series GSE268695. Mus musculus. 95 samples. Type: Other.
Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer identifies putative master regulators of intratumoral heterogeneity
GEO Series GSE278722. Homo sapiens. 18 samples. Type: Methylation profiling by genome tiling array.
Spatial transcriptomics of P35 septum
GEO Series GSE282127. Mus musculus; synthetic construct. 2 samples. Type: Other.
High-resolution spatial transcriptomics of hormone-induced ovulation in mice
GEO Series GSE240271. Mus musculus. 8 samples. Type: Other.
Muscle injury induces a transient senescence-like state that is required for myofiber growth during muscle regeneration [Spatial Transcriptomics]
GEO Series GSE215305. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Biomarker Identification via Spatial Transcriptomics Profiling of Colorectal Cancer and Colorectal Cancer with Liver Metastasis Stem Cells
GEO Series GSE271285. Homo sapiens. 40 samples. Type: Other.
Parenchymal, airway, and vessel spatial transcriptomics signature in COPD
GEO Series GSE292993. synthetic construct; Homo sapiens. 794 samples. Type: Other.
Spatial transcriptomics profiling of endometrial tissue from recurrent implanation failure patients.
GEO Series GSE284236. Homo sapiens. 95 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.