Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
894
datasets available to search
ShareScore release 0.9.0
Dataset results
894 results for “Single-cell RNA-seq”
Durable Suppression of Acquired MEK Inhibitor Resistance in Cancer by Sequestering MEK from ERK and Promoting Anti-Tumor T-cell Immunity [single-cell RNA-seq]
GEO Series GSE158609. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Gastric organoid single-cell RNA-seq
GEO Series GSE121940. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq provides insight into the underdeveloped immune system of germ-free mice
GEO Series GSE295200. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Distinct transcriptional programs characterize neoantigen-specific T cells in lung cancers treated with neoadjuvant PD-1 blockade [single-cell RNA-seq]
GEO Series GSE176021. Homo sapiens. 110 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis of cervical lymph nodes from mice intradermally infected with Mycobacterium tuberculosis
GEO Series GSE300819. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-Seq of young, old and metformin-treated mouse muscle and adipose
GEO Series GSE194386. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Colonic single-cell RNA-seq
GEO Series GSE102698. Homo sapiens; Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
REGION-SPECIFIC NEURAL STEM CELL LINEAGES REVEALED BY SINGLE-CELL RNA-SEQ FROM HUMAN EMBRYONIC STEM CELLS
GEO Series GSE86894. Homo sapiens. 4556 samples. Type: Expression profiling by high throughput sequencing.
Distinct stage-specific transcriptional states of B cells in human tonsillar tissue [single-cell RNA-seq]
GEO Series GSE182221. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Genetic Ptbp1 depletion does not induce neuronal RNA splicing patterns in mature astrocytes (Single-cell RNA-seq)
GEO Series GSE294768. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA-seq reveals transcriptomic modulation of Alzheimer’s Disease by Activated Protein C (APC)
GEO Series GSE227157. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA-Seq Analysis of Metastasis-Primary Tumor Dissimilarity in a Patient with Gastrointestinal Neuroendocrine Cancer
GEO Series GSE140312. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Disentangling glial diversity in peripheral nerves at single-nuclei resolution [single-cell and single-nuclei RNA-seq]
GEO Series GSE182098. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Type I Interferon Signaling Mediates Microglial Dysfunction and Senescence in Human-Mouse Chimeric Brain Models of Down Syndrome and Alzheimer’s Disease [single-cell RNA-seq]
GEO Series GSE189226. Mus musculus; Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Improved bacterial single-cell RNA-seq through automated MATQ-seq
GEO Series GSE218633. Salmonella enterica subsp. enterica serovar Typhimurium. 396 samples. Type: Expression profiling by high throughput sequencing.
Pooled single-cell RNA-seq data from T cells from human synovial tissue
GEO Series GSE202375. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell ATAC-Seq and RNa-seq of human and mouse basal cell carcinoma (BCC)
GEO Series GSE186184. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Dynamic IFNβ signalling underlies treatment response to immune checkpoint therapy in cancer [single-cell RNA-seq]
GEO Series GSE153942. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-Seq (scRNA-Seq) of mouse basal cell carcinoma (BCC) immune cells.
GEO Series GSE204949. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics reveal the pathogenesis of chronic granulomatous disease under natural conditions [RNA-Seq]
GEO Series GSE270426. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.