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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies
GEO Series GSE306575. Homo sapiens; Mus musculus. 9 samples. Type: Other.
Spatial transcriptomic profiling of precursor lesions of gallbladder adenocarcinoma
GEO Series GSE259311. Homo sapiens. 56 samples. Type: Other.
Spatial transcriptomic analysis reveals increased adipogenesis and non-alcoholic fatty liver disease pathway in pig-to-NHP islet transplantation recipient liver during early post-transplantation perio
GEO Series GSE261581. Macaca mulatta. 18 samples. Type: Other.
A pairwise cytokine code explains the organism-wide response to sepsis [Spatial transcriptomics by Array-seq]
GEO Series GSE248904. Mus musculus. 4 samples. Type: Other.
Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways
GEO Series GSE242058. Rattus norvegicus. 8 samples. Type: Expression profiling by high throughput sequencing.
Progenitor Cell Dynamics in AGA: Insights from Spatially Resolved Transcriptomics
GEO Series GSE282856. Homo sapiens. 8 samples. Type: Other.
Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - MERSCOPE Data
GEO Series GSE308147. Homo sapiens; synthetic construct. 6 samples. Type: Other.
Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.
GEO Series GSE210380. Mus musculus. 4 samples. Type: Other.
Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing (Spatial Transcriptomics, part 2)
GEO Series GSE295619. Homo sapiens. 2 samples. Type: Other.
Spatial transcriptome analysis unveils an innate immune activation signature of acute T cell-mediated rejection in kidney transplants
GEO Series GSE252137. Homo sapiens. 12 samples. Type: Other.
Orthotopic 4T1 tumors spatial transcriptomics
GEO Series GSE230098. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptomic analysis of the Arabidopsis thaliana - Botrytis cinerea interaction
GEO Series GSE24444. Arabidopsis thaliana. 6 samples. Type: Expression profiling by array.
Spatial transcriptome profiling identifies CREB1 as a regulator of core transcriptional programs in idiopathic pulmonary fibrosis
GEO Series GSE169500. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)
GEO Series GSE209583. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing; Other.
Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain
GEO Series GSE186097. Mus musculus. 4 samples. Type: Other.
Spatial transcriptomics analysis of a panel of PDX models of GBM
GEO Series GSE268312. Homo sapiens/Mus musculus xenograft; Homo sapiens; Mus musculus. 30 samples. Type: Other.
Single-Cell and Spatial Transcriptomics Identified Fatty Acid–Binding Proteins Controlling Endothelial Glycolytic and Arterial Programming in Pulmonary Hypertension
GEO Series GSE261445. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analysis of 53 pre-treatment biopsies from LARC patients using GeoMx technology
GEO Series GSE279942. Homo sapiens. 97 samples. Type: Other.
Spatially resolved whole transcriptome profiling in human and mouse tissue using Digital Spatial Profiling [E13.5 mouse embryo]
GEO Series GSE186594. Mus musculus. 357 samples. Type: Expression profiling by high throughput sequencing.
Single Cell and Spatial Transcriptomics Implicate Vascular Cell Orchestration of Inflammatory Changes After Ultraviolet Light Exposure [scRNA-seq]
GEO Series GSE298107. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.