Find research datasets worth reusing
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894
datasets available to search
ShareScore release 0.9.0
Dataset results
894 results for “Single-cell RNA-seq”
A Dataset Examining Technical Factors on Fixed Whole Blood Single-Cell RNA-Seq
GEO Series GSE266615. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of telencephalic organoids from healthy CTRL and HD (Huntington’s disease) hESC (RUES2) grown as mono-culture or co-culture of chimeric organoids
GEO Series GSE272271. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Integrative analysis of single-cell ATAC-seq and RNA-seq using Self-Organizing Maps
GEO Series GSE89285. Mus musculus. 833 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-seq of peripheral blood links cell-type-specific regulation of splicing to autoimmune and inflammatory diseases [scRNAseq_JP_RIK]
GEO Series GSE280974. Homo sapiens. 302 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomics and single-cell RNA sequencing analysis of long-term cultured human islets in vitro [RNA-Seq]
GEO Series GSE280983. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Perturbational single-cell RNA-seq time course of CD34+ HSPC megakaryocyte differentiation with CMO multiplexing (Days 0–7, 1 uM compounds)
GEO Series GSE305979. Homo sapiens. 34 samples. Type: Expression profiling by high throughput sequencing.
Bulk and single-cell transcriptomics identify gene signatures of stem cell-derived NK cell donors with superior anti-tumor activity [Bulk RNA-seq]
GEO Series GSE249991. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis of the brainstem of mutant SOD1 mice reveals perturbed cell types and pathways of amyotrophic lateral sclerosis
GEO Series GSE178693. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis of p53 knockout primary astrocytes in vitro.
GEO Series GSE196408. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Aged intestinal stem cells propagate cell-intrinsic sources of inflammaging in mice [single-cell RNA-seq]
GEO Series GSE190848. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell dissection of Comma-1D cultures reveals cell populations with unique differentiation and transformation properties [bulk RNA-Seq]
GEO Series GSE182351. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of brassinosteroid response in Arabidopsis roots
GEO Series GSE212230. Arabidopsis thaliana. 30 samples. Type: Expression profiling by high throughput sequencing.
A contamination focused approach for optimizing the single-cell RNA-seq experiment
GEO Series GSE234620. Homo sapiens; Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
Sensitive dissection of a genomic regulatory landscape using bulk and targeted single-cell activation [Chromatin RNA-seq]
GEO Series GSE274258. Homo sapiens. 2 samples. Type: Other.
The Human Testis Cell Atlas via Single-cell RNA-seq
GEO Series GSE120508. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single cell response landscape of graded Nodal signaling in zebrafish explants [single-cell RNA-seq]
GEO Series GSE165653. Danio rerio. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq data of human hESCs to evaluate SCnorm: robust normalization of single-cell rna-seq data
GEO Series GSE85917. Homo sapiens. 414 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of peripheral blood links cell-type-specific regulation of splicing to autoimmune and inflammatory diseases [scRNAseq_KR_SGI]
GEO Series GSE281106. Homo sapiens. 352 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq Reveals a Developmental Hierarchy and Oncogenic Networks for Initiation of Medulloblastoma [RNA-Seq]
GEO Series GSE120973. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis in TBI mgll KO mice
GEO Series GSE178226. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.