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1,174 results for “cancer genomics”

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geo20/100

Genomic profiling identifies TITF1 as a lineage-specific oncogene amplified in lung cancer: aCGH Arrays

GEO Series GSE10025. Homo sapiens. 137 samples. Type: Genome variation profiling by array.

openGEO-OpenMar 2008View details →
geo20/100

Genome-wide maps of ONECUT2 binding sites in 22Rv1 human castration resistant prostate cancer cell

GEO Series GSE97551. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenOct 2018View details →
geo20/100

Decitabine disrupts EBV genomic epiallele DNA methylation patterns around CTCF binding sites to increase chromatin accessibility and lytic transcription in gastric cancer [ATAC]

GEO Series GSE239645. human gammaherpesvirus 4. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →
geo20/100

Genome-wide maps of chromatin state of WDR5 and KAT2A in gastric cancer BGC823 cells [ChIP-seq]

GEO Series GSE63763. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenOct 2016View details →
geo20/100

Integrative Genomic and Proteomic Analysis of Prostate Cancer Reveals Signatures of Metastatic Progression

GEO Series GSE3325. Homo sapiens. 19 samples. Type: Expression profiling by array.

openGEO-OpenSep 2005View details →
geo20/100

Genome-wide microRNA expression profiling identifies miR-9-3 and miR-193a as targets for DNA methylation in non-small cell lung cancers

GEO Series GSE31579. Homo sapiens. 4 samples. Type: Non-coding RNA profiling by array.

openGEO-OpenMar 2012View details →
geo20/100

Epigenetic alterations detected in the genome of very young breast cancer patients: identification of new biomarkers

GEO Series GSE100850. Homo sapiens. 39 samples. Type: Methylation profiling by genome tiling array.

openGEO-OpenOct 2018View details →
geo20/100

Colorectal cancer progression to metastasis is associated with dynamic genome-wide biphasic 5-hydroxymethylcytosine accumulation.

GEO Series GSE268934. Homo sapiens. 18 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenJun 2024View details →
geo20/100

Genomic analyses of breast cancer cells: 17β-hydroxysteroid dehydrogenase type 1 induces transcriptional changes in estradiol-dependent and independent manners

GEO Series GSE77345. Homo sapiens. 8 samples. Type: Expression profiling by array.

openGEO-OpenSep 2016View details →
geo20/100

SOX2 Genomic Localization in Small Cell Lung Cancer Cell Lines

GEO Series GSE182728. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenDec 2021View details →
geo20/100

The genomic and immune landscape of long-term survivors of high-grade serous ovarian cancer

GEO Series GSE211687. Homo sapiens. 262 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by genome tiling array.

openGEO-OpenAug 2022View details →
geo20/100

Whole genome bisulfite sequencing identifies stage- and subtype-specific DNA methylation signatures in pancreatic cancer

GEO Series GSE243528. Homo sapiens; Mus musculus. 47 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo20/100

Genome-wide Expression Profiling in pancreatic cancer cells

GEO Series GSE85991. Homo sapiens. 4 samples. Type: Expression profiling by array.

openGEO-OpenAug 2018View details →
geo20/100

Genome-wide maps of chromatin state in HCT116 colorectal cancer cell (HiC)

GEO Series GSE179542. Homo sapiens. 4 samples. Type: Other.

openGEO-OpenJan 2022View details →
geo20/100

Genomic alterations indicate tumor origin and varied metastatic potential of disseminated cells from prostate cancer

GEO Series GSE11155. Homo sapiens. 89 samples. Type: Genome variation profiling by genome tiling array.

openGEO-OpenAug 2008View details →
geo20/100

Genomic pathways modulated by Twist in breast cancer

GEO Series GSE87705. Homo sapiens. 11 samples. Type: Expression profiling by array.

openGEO-OpenJan 2017View details →
geo20/100

Genome-wide survey by ChIP-seq reveals CREB1 regulation of lncRNAs in gastric cancer.

GEO Series GSE220708. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo20/100

Genome-wide hydroxymethylcytosine pattern changes in basal-like breast cancer patients

GEO Series GSE101444. Homo sapiens. 8 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenJul 2018View details →
geo20/100

Genome‐wide analysis reveals miR‐3184‐5p and miR‐181c‐3p as a critical regulator for adipocytes‐associated breast cancer

GEO Series GSE118342. Homo sapiens. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo20/100

Decitabine disrupts EBV genomic epiallele DNA methylation patterns around CTCF binding sites to increase chromatin accessibility and lytic transcription in gastric cancer

GEO Series GSE234658. human gammaherpesvirus 4. 16 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record