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871
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ShareScore release 0.7.1
Dataset results
871 results for “escherichia coli”
Effect of the global regulators RpoS and cyclic-AMP/CRP on the transcriptome of Escherichia coli K12 during carbon- and energy-limited growth
GEO Series GSE25982. Escherichia coli K-12. 6 samples. Type: Expression profiling by array.
Tannin resistance strategies of Escherichia coli in anaerobic conditions
GEO Series GSE9755. Escherichia coli; Escherichia coli K-12. 4 samples. Type: Expression profiling by array.
Conditioning of uropathogenic Escherichia coli to nitrosative stress
GEO Series GSE15319. Escherichia coli; Escherichia coli UTI89. 4 samples. Type: Expression profiling by array.
Molecular and immunological interrogation of a live-attenuated enterotoxigenic Escherichia coli vaccine highlights features unique to wild type infection
GEO Series GSE134792. Escherichia coli; Homo sapiens. 250 samples. Type: Protein profiling by protein array.
Iron availability enhances the cellular energetics of aerobic Escherichia coli cultures by activating anaerobic respiratory chains
GEO Series GSE203540. Escherichia coli. 18 samples. Type: Expression profiling by high throughput sequencing.
Expression data from Escherichia coli strains with increased or decreased levels of Obg (ObgE, CgtA, YhbZ)
GEO Series GSE62918. Escherichia coli. 12 samples. Type: Expression profiling by array.
Expression of Escherichia coli treated with cefsulodin and mecillinam, alone and in combination
GEO Series GSE10158. Escherichia coli K-12. 43 samples. Type: Expression profiling by array.
Invasive Escherichia coli contributes to colon carcinogenesis by suppressing epithelial autophagy: application of phage therapy
GEO Series GSE144719. Mus musculus. 12 samples. Type: Expression profiling by array.
Transcriptional profiling of Escherichia coli
GEO Series GSE13048. Escherichia coli K-12; Escherichia coli. 16 samples. Type: Expression profiling by array.
Direct entry by RNase E is a major pathway for the degradation and processing of RNA in Escherichia coli
GEO Series GSE58285. Escherichia coli. 6 samples. Type: Expression profiling by high throughput sequencing.
The antibiotics potentiator bicarbonate causes upregulation of tryptophanase and iron acquisition proteins in Escherichia coli
GEO Series GSE110493. Escherichia coli. 4 samples. Type: Expression profiling by high throughput sequencing.
Indole cell signaling occurs primarily at low temperatures in Escherichia coli
GEO Series GSE9923. Escherichia coli K-12; Escherichia coli. 14 samples. Type: Expression profiling by array.
Persistence of Escherichia coli in the microbiomes of mizuna mustard (Brassica rapa var. japonica) - does seed sanitization matter?
Seed sanitization via chemical processes removes/reduces microbes from the external surfaces of the seed and thereby could have an impact on the plants' health or productivity. To determine the impact of seed sanitization on the plants' microbiome and pathogen persistence, sanitized and unsanitized seeds from two leafy green crops, red Romaine lettuce (Lactuca sativa cv. 'Outredgeous') and mizuna mustard (Brassica rapa var. japonica) were exposed to Escherichia coli and grown in controlled environment growth chambers simulating environmental conditions aboard the International Space Station. Plants were harvested at four intervals from 7 days post-germination to maturity. The bacterial communities of leaf and root were investigated using the 16S rRNA sequencing while quantitative polymerase chain reaction (qPCR) and heterotrophic plate counts were used to reveal the persistence of E. coli. Result: E. coli was detectable for longer periods of time in plants from sanitized versus unsanitized seeds and was identified in root tissue more frequently than in leaf tissue. 16S rRNA sequencing showed dynamic changes in the abundance of members of the phylum Proteobacteria, Firmicutes, and Bacteroidetes in leaf and root samples of both leafy crops. We observed minimal changes in the microbial diversity of lettuce or mizuna leaf tissue with time or between sanitized and unsanitized seeds. Beta-diversity showed that time had more of an influence on all samples versus the E. coli treatment. Conclusion: Our results indicated that the seed surface sanitization, a current requirement for sending seeds to space, could influence the microbiome. Insight into the changes in the crop microbiomes could lead to healthier plants and safer food supplementation.
Xenophagic process controls the Enteroinvasive Escherichia coli infection of the epithelial cells III
GEO Series GSE93588. Homo sapiens. 16 samples. Type: Expression profiling by array.
RNAseq analysis of antibacterial mechanism of Cinnamomum camphora essential oil against Escherichia coli
GEO Series GSE160284. Escherichia coli. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profile of Escherichia coli K12 MG1655 cells lacking selected genes
GEO Series GSE165008. Escherichia coli str. K-12 substr. MG1655. 8 samples. Type: Expression profiling by high throughput sequencing.
Escherichia coli K-12: 5% isooctane treatment at four time points
GEO Series GSE32131. Escherichia coli K-12; Escherichia coli O157:H7 str. EDL933; Escherichia coli str. K-12 substr. MG1655; Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai. 4 samples. Type: Expression profiling by array.
Transcriptome profiling of oral keratinocytes cocultured with Th17 cells during Escherichia coli infection
GEO Series GSE311202. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Role of CRP K100 positive charge on Escherichia coli global transcriptome
GEO Series GSE97406. Escherichia coli. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of Escherichia coli O157:H7 EDL933 during rumen fluid exposure using microarrays
GEO Series GSE16747. Escherichia coli; Escherichia coli O157:H7 str. EDL933. 7 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.