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794 results for “publishing”
Test data of published work titled 'Automatic Detection of Colorectal Polyps with Mixed Convolutions and its Occlusion Testing'
<p>Test data of published work titled 'Automatic Detection of Colorectal Polyps with Mixed Convolutions and its Occlusion Testing' includes:</p><ol><li>Gastrointestinal atlas-Colon Polyp dataset (test dataset)</li><li>Supplementary file containing information of Gastrointestinal atlas-Colon Polyp</li></ol><p>For more details: <a href="https://link.springer.com/article/10.1007/s00521-023-08762-z">Automatic Detection of Colorectal Polyps with Mixed Convolutions and its Occlusion Testing | Neural Computing and Applications (springer.com) </a></p>
Accompanying patients aged 65 or over: how companions' health literacy affects value co-creation during medical encounters. Journal of Aging and Health. 33 - 10, pp. 953 - 964. Sage Publishing, 2021.
<p>Data file</p>
Data for "Phonon thermal Hall effect in charge-compensated topological insulators" published in PRB 109, 104304 (2024), Editors' Suggestion
<p>The manuscript of this <a href="https://doi.org/10.1103/PhysRevB.109.104304">Phys. Rev. B paper</a> is also available on arxiv <a href="https://arxiv.org/abs/2401.03064">2401.03064</a>. Note, however that the order of the Figures 6-9 in the Appendix differs between the PRB version and the arxiv version. The naming of the data sets stored here on Zenodo refer to the Figure numbering of the arxiv version.</p>
Dynamic semantic publishing: four use case scenarios
<p><span>This presentation discusses: 1) How to benefit from semantic technology along the content life cycle. 2) How to implement a learning system, in which knowledge graphs evolve over time. 3) How to integrate semantic technology in a CMS. 4) How taxonomies can build the backbone of a linked data infrastructure.</span></p>
Scores for indicators of IKS inclusivity applied to DFO advice documents published during 2019-2024
<p>This data set is the basis for our paper, <em>Inclusivity of Indigenous Knowledge Systems in Fisheries Management</em>, first submitted to <em>Fish and Fisheries</em> on November 24, 2024, revision invited on January 30, 2025, and re-submission on February 2025..</p> <p>Data are presented in a spreadsheet with three tables.</p> <p><strong>The first table</strong> reproduces information from Table 2 in the manuscript, describing each indicator and its scoring criteria. </p> <p><strong>The second table</strong> contains information on each of the advice documents analyzed, including their full citation hyperlinked to the original document. While each column is self-explanatory, we highlight the following:</p> <ul> <li><strong>Column H</strong> provides scores for each indicator that applies to the document, and <strong>Column J</strong> normalizes the scores. </li> <li><strong>Column J</strong> provides the justification for each score. </li> <li> <strong>Column K</strong> provides, in a few cases, additional information which does not necessarily contribute to the score's justification but which provides additional context. </li> </ul> <p><strong>The third table</strong> defines acronyms.</p>
Figure 11 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 11 - Submission of manuscripts to ARPHA Writing Tool through Application Programming Interface (API).
Figure 9 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 9 - The occurrence data from articles published in the Biodiversity Data Journal (in this case from the paper of Johnson 2013) are automatically indexed via Darwin Core Archive in the GBIF Integrated Publishing Toolkit.
Figure 4a from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 4a - Interactive mapping of geo-coordinated species occurrences (example from Frolov and Akhmetova 2013).
Figure 13 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 13 - Conversion of Ecological Metadata Language (EML) metadata into data paper manuscripts in ARPHA Writing Tool.
Figure 7 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 7 - Extraction and delivery of data and content from published articles to aggregators, nomenclators, archives, and indexers.
Figure 4d from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 4d - All taxon names usages (TNU) in an article are indexed and matched to their type of use (e.g. citations in the text, heading a taxon treatment, associated to images or present in identification keys, example from Brown et al. 2017).
Figure 8 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 8 - Export of data from articles published in Biodiversity Data Journal. Species occurrences and other structured data tables can be downloaded in CSV format (green arrow); all species occurrences are also available as Darwin Core Archives and are automatically harvested and indexed by GBIF (red box and arrow).
Figure 12 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 12 - Creation of data paper manuscripts from Ecological Metadata Language (EML) metadata hosted at the GBIF IPT
Figure 1 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 1 - ARPHA-BioDiv is a set of standards, guidelines, tutorials, tools, workflows, journals and services, designed to facilitate the scholarly publication and dissemination of biodiversity data.
Figure 4c from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 4c - Images and pages from historic literature where a taxon name has been mentioned are available from various sources (e.g. Encyclopedia of Life and the Biodiversity Heritage Library via Pensoft Taxon Profile (PTP) (in this case Annoniaceae from Hoekstra et al. 2016).
Figure 4b from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 4b - Pensoft Taxon Profile (PTP) is created in real time by clicking on any taxon name mentioned in an article (in this case Annoniaceae from Hoekstra et al. 2016).
Figure 2 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 2 - ARPHA consists of two independent journal publishing workflows: (1) ARPHA-XML, where the manuscript is written and processed via ARPHA Writing Tool and (2) ARPHA-DOC, where the manuscript is submitted and processed as document file(s).
Figure 8 from: Penev L, Mietchen D, Chavan V, Hagedorn G, Smith V, Shotton D, Ó Tuama É, Senderov V, Georgiev T, Stoev P, Groom Q, Remsen D, Edmunds S (2017) Strategies and guidelines for scholarly publishing of biodiversity data. Research Ideas and Outcomes 3: e12431. https://doi.org/10.3897/rio.3.e12431
Figure 8 - Import of a data paper manuscript from EML file in the ARPHA Writing Tool.
Figure 2 from: Penev L, Mietchen D, Chavan V, Hagedorn G, Smith V, Shotton D, Ó Tuama É, Senderov V, Georgiev T, Stoev P, Groom Q, Remsen D, Edmunds S (2017) Strategies and guidelines for scholarly publishing of biodiversity data. Research Ideas and Outcomes 3: e12431. https://doi.org/10.3897/rio.3.e12431
Figure 2 - Import of specimen records from GBIF, BOLD, iDigBio and PlutoF into ARPHA manuscripts.
Figure 1 from: Dumnicka E, Galas J (2017) An overview of stygobiontic invertebrates of Poland based on published data. Subterranean Biology 23: 1-18. https://doi.org/10.3897/subtbiol.23.11877
Figure 1 - Number of publications concerning subterranean aquatic fauna of Poland through time.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.