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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Dual and spatially resolved drought responses in the Arabidopsis leaf mesophyll revealed by single-cell transcriptomics
GEO Series GSE273033. Arabidopsis thaliana. 8 samples. Type: Expression profiling by high throughput sequencing.
Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium]
GEO Series GSE269719. Mus musculus. 12 samples. Type: Other.
Discovering Molecular Signatures in ATMR: Single-cell RNA Sequencing Analysis of Human Blood and Tissue Spatial Transcriptomics [scRNA-seq]
GEO Series GSE248788. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue
GEO Series GSE207843. Mus musculus. 26 samples. Type: Other.
Immunologic features of nontuberculous mycobacterial pulmonary disease based on spatially resolved whole transcriptomes
GEO Series GSE273714. Homo sapiens. 96 samples. Type: Other.
Characterization of HBV and co-infection with HDV and HIV through spatial transcriptomics
GEO Series GSE265785. Homo sapiens. 37 samples. Type: Other.
Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve
GEO Series GSE218539. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury
GEO Series GSE214611. Homo sapiens; Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Clinical Characteristics and Spatial transcriptome analysis of Early Resistance to Alectinib in ALK-Positive non-small cell lung cancer: A Retrospective OLCSG Study
GEO Series GSE309894. Homo sapiens. 34 samples. Type: Other.
Spatial transcriptomic data of a lymph node from an individual with Multicentric Castleman Disease
GEO Series GSE240843. Homo sapiens. 1 samples. Type: Other.
SpotClean adjusts for spot swapping in spatial transcriptomics data
GEO Series GSE178221. Homo sapiens; Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation
GEO Series GSE227742. Mus musculus. 4 samples. Type: Other.
Spatial joint profiling of DNA methylome and transcriptome in tissues
GEO Series GSE270498. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other.
Spatial transcriptomics of the Rhesus Macaque Hippocampus during homeostasis and chronic SIV CL757 infection
GEO Series GSE261969. Macaca mulatta. 48 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics reveal the pathogenesis of chronic granulomatous disease under natural conditions [RNA-Seq]
GEO Series GSE270426. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic sequencing of repaired lung transplanted with human P63+ progenitor [STOmics-seq]
GEO Series GSE260779. Mus musculus; Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis
GEO Series GSE214349. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing.
Differential transcriptomic profile of Piscirickettsia salmonis LF-89 and EM-90 during an in vivo spatial separation co-culture in Atlantic salmon
GEO Series GSE266847. Piscirickettsia salmonis. 6 samples. Type: Expression profiling by high throughput sequencing.
Spatial Transcriptomics of Pancreatic Tumors Reveal Distinct Compartmentalisation of Neutrophil Subsets [Spatial Transcriptomics]
GEO Series GSE244534. Mus musculus. 4 samples. Type: Other.
Spatial transcriptomics of ovarian cancer tumors
GEO Series GSE213699. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.