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FIGURE 7 in Genetic and phenotypic diversity of Branchinecta sandiegonensis (Crustacea: Anostraca) in the vernal pools of Baja California, México

FIGURE 7. Phenotypic traits variation between sexes of B. sandiegonensis individuals in Baja California, México. Asterisks indicates significant differences between sexes at the P<0.0001 level.

FIGURE 6 in Genetic and phenotypic diversity of Branchinecta sandiegonensis (Crustacea: Anostraca) in the vernal pools of Baja California, México

FIGURE 6. Phenotypic trait variation of B. sandiegonensis individuals across the four geographic regions sampled in Baja California. Data with different uppercase letters are significantly different at the P<0.05 level, according to Tukey post-hoc tests. For abbreviations, see Fig. 1.

FIGURE 3. a in Genetic and phenotypic diversity of Branchinecta sandiegonensis (Crustacea: Anostraca) in the vernal pools of Baja California, México

FIGURE 3. a, Bayesian phylogenetic tree of B. sandiegonensis based on analysis of mitochondrial COI sequences, showing the two major clades: Clade A and Clade B (sensu Bohonak 2005). The 31 samples obtained in this study are denoted by rectangles, with colors corresponding to the region of collection. The 54 sequences downloaded from GenBank lack colored rectangles, and all are from the northern portion of the species' range in the USA (GenBank accession numbers: FJ439689-FJ439743). The tree was rooted with Branchinecta lynchi (GenBank accession numbers HM568501-HM568505). Numbers on branches indicate Bayesian posterior probabilities ≥0.8. b, Median-joining haplotype network based on 568 bp of the mitochondrial COI sequences. Circle size is proportional to haplotype frequencies; line length is roughly proportional to the estimated number of steps between haplotypes. Each geographic region is represented in a different color. For abbreviations, see Fig. 1.

FIGURE 2 in Genetic and phenotypic diversity of Branchinecta sandiegonensis (Crustacea: Anostraca) in the vernal pools of Baja California, México

FIGURE 2. Definition of the six morphometric traits measured on 232 individuals of B. sandiegonensis. Drawing modified from Fugate (1993) and morphometric features based on Timms (2012). a, total body length. b, thorax length. c, abdomen length. d, cercopod length. e, antennule length. f, right antenna length for males, and f1 for females.

FIGURE 4. a in Genetic and phenotypic diversity of Branchinecta sandiegonensis (Crustacea: Anostraca) in the vernal pools of Baja California, México

FIGURE 4. a, Principal components analysis of the individual genotypes, where the region was used as class factor for the analysis. Colors correspond to the region. b, Edwards genetic distance Dendrogram. The colors below names correspond to the region. c, plots of the genetic clusters inferred by STRUCTURE (K=2, 3, 4). Each vertical column represented an individual, and pools are indicated by the legend. For abbreviations, see Fig. 1.

opennotspecifiedJun 2014View details →

Fig. 2 Minimum-spanning network among 44 in Mitochondrial evidence for genetic diversity and low phylogeographic differentiation in the Marsh Warbler Acrocephalus palustris (Aves: Acrocephalidae)

Fig. 2 Minimum-spanning network among 44 COI haplotypes of Marsh Warbler (see Table S2). Size of circles represents the relative frequency of given haplotypes and each line between black nodes indicates a single mutational step

opennotspecifiedJun 2014View details →

Fig. 3 in Mitochondrial evidence for genetic diversity and low phylogeographic differentiation in the Marsh Warbler Acrocephalus palustris (Aves: Acrocephalidae)

Fig. 3 Left: Mismatch distribution. Expected (solid line) and observed (broken line) mismatch distribution under population expansion model. Right: Bayesian skyline plot representing the historical demographic

Fig. 3 a in Phylogeographic patterns of genetic diversity in the common spadefoot toad, Pelobates fuscus (Anura: Pelobatidae), reveals evolutionary history, postglacial range expansion and secondary contact

Fig. 3 a Bayesian phylogenetic analysis based on a 571-bp fragment of the mitochondrial cyt b gene. Only haplotype sequences have been used. Spea bombifrons was used as outgroup. Asterisks denote Bayesian posterior probabilities values: *95–98 %; **99–100 %. b Haplotype network reconstruction of 29 haplotypes of Pelobates fuscus fuscus (W) and of 13 haplotypes of P. f. vespertinus (E), based on the analysis of a 571-bp fragment of the mitochondrial cytochrome b gene. Size of circles is proportional to the number of individuals sharing a given haplotype. The frequency of each haplotype has been computed based on published data (Crottini et al. 2007) and on new sequences

Fig. 1 in Phylogeographic patterns of genetic diversity in the common spadefoot toad, Pelobates fuscus (Anura: Pelobatidae), reveals evolutionary history, postglacial range expansion and secondary contact

Fig. 1 Geographic locations of the 59 analyzed populations of Pelobates. The limit of the geographic distribution of Pelobates fuscus is indicated with the solid line. The dashed line indicates the presumptive position of the contact zone between P. f. fuscus

Fig. 7 in Phylogeographic patterns of genetic diversity in the common spadefoot toad, Pelobates fuscus (Anura: Pelobatidae), reveals evolutionary history, postglacial range expansion and secondary contact

Fig. 7 Predictive potential niche models (black areas) of Pelobates f. fuscus (a and c) and P. f. vespertinus (b and d) for Last Glacial Maximum based on the MIROC (a and b) and CCSM (c and d) models. Models are above the average 10-percentile training threshold.

Fig. 5 A in Phylogeographic patterns of genetic diversity in the common spadefoot toad, Pelobates fuscus (Anura: Pelobatidae), reveals evolutionary history, postglacial range expansion and secondary contact

Fig. 5 A multilocus cline at four diagnostic allozyme loci along transect in the contact zone of Pelobates fuscus fuscus and P. f. vespertinus. The vertical axis shows the frequency of genetic variants diagnostic for P. f. fuscus (variation diagnostic for P. f. vespertinus is the inverse)

Fig. 2 in Phylogeographic patterns of genetic diversity in the common spadefoot toad, Pelobates fuscus (Anura: Pelobatidae), reveals evolutionary history, postglacial range expansion and secondary contact

Fig. 2 Unweighted pair group method with arithmetic mean phenogram (a) and neighbor-joining tree (b) showing genetic (allozyme) relationship among the Pelobates species populations sampled based on Nei's (1978) unbiased genetic distance (DNei); bootstrap values ≥ 70 %. Correspondence analysis of allele frequencies among the studied samples of P. fuscus (c), where dark circles represent P. f. vespertinus samples, gray circles are samples from the contact zone from Kursk Province of Russia, open circles are P. f. fuscus samples from Eastern

opennotspecifiedDec 2012View details →

Fig. 3 in Morphological and genetic analyses of xeniid soft coral diversity (Octocorallia; Alcyonacea)

Fig. 3 Bayesian phylogenetic tree of Ovabunda, Xenia, Bayerxenia and Heteroxenia. Node labels indicate Bayesian posterior probabilities and maximum likelihood bootstrap support values (in italics) based on

opennotspecifiedDec 2012View details →

Fig. 1 in Morphological and genetic analyses of xeniid soft coral diversity (Octocorallia; Alcyonacea)

Fig. 1 Colony morphology of Xeniidae: a Heteroxenia and Bayerxenia (here Bayerxenia sp.1). Siphonozooids are seen as white rings between the polyps. b Ovabunda and Xenia (here Xenia sp. 5). These genera lack siphonozooids

opennotspecifiedAug 2011View details →

Fig. 1 in Multilocus population analysis of Gavia immer (Aves: Gaviidae) mtDNA reveals low genetic diversity and lack of differentiation across the species breeding range

Fig. 1 Haplotype network constructed using the median joining method. Haplotype numbers are indicated. Circle patterns represent coastal sampling locations: GZ Galicia, Spain, MX Mexico, GE Germany, NJ New Jersey, US, MI Michigan, US, CA Canada, FL Florida, US. Circle surfaces are roughly proportional to the number of individuals with each haplotype (Table 3)

opennotspecifiedJan 2018View details →

FIGURE 3 in Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa

FIGURE 3. Macro- and micromorphological characteristics of Terfezia eliocrocae. a. the steppic habitat with Bedouins desert truffles harvesters. b,c. ascomata collected under Helianthemum salicifolium. d. asci and spores. e–g. ascospores (f,g. scanning electron micrograph). Bars: c = 2 cm, d = 10 μm; e–g = 5 μm.

opennotspecifiedJan 2018View details →

FIGURE 2 in Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa

FIGURE 2. Macro- and microscopic characters of Terfezia crassiverrucosa. a. ascocarp collected under Helianthemum hirtum. b. gleba, cross section. c,d. asci with spores. e–h. ascospores (f–h. scanning electron micrograph). Bars: a–b = 1 cm, c–d = 10 μm, e = 5 μm, f–g = 5 μm, h = 2 μm.

opennotspecifiedJan 2018View details →

FIGURE 1 in Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa

FIGURE 1. Maximum likelihood (ML) tree inferred from the combined ITS and 28S rDNA sequences of Terfezia species with Peziza depressa and Tirmania pinoyi as outgroups. The sequences obtained in the present study are highlighted in bold. The first value on the branches represent the ML bootstrap proportions (≥ 70%) and the value after the slash shows the posterior probability calculated by Bayesian analysis (≥ 0.95). Bar = 1 changes /100 characters.

opennotspecifiedAug 2024View details →

Figure 6 in Limited genetic depletion despite extinction risk: genomic diversity of a peripheral population of red-spotted bluethroats in Central Europe

Figure 6. Manhattan plots showing SNP levels of ROH per autosome for A, All L. s. svecica individuals, B, Sve_Krk population. The Manhattan plot portrays ROH analysis across 28 autosomes. The height of the peak represents the percentage of individuals sharing homozygous SNP per ROH.