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Dataset results
264 results for “3D Reconstruction”
FISH datasets used in Zou et al. integrating multi-track Hi-C data for genome-scale reconstruction of 3D chromatin structure
<p>This upload contains the FISH datasets used in Zou et al. integrating multi-track Hi-C data for genome-scale reconstruction of 3D chromatin structure.</p> <p>If you use the datasets, we would be grateful if you cited the following paper:</p> <p>Zou, C., Zhang, Y., Ouyang, Z. (2016) HSA: integrating multi-track Hi-C data for genome-scale reconstruction of 3D chromatin structure. Genome Biology, 17: 40.</p>
Gammertingen mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. Subsequently the specimen of mail was tested in VR to reveal its physical and mechanical properties. For further details see https://doi.org/10.1016/j.culher.2020.12.002 The authors of the reconstruction are Martijn A. Wijnhoven https://vu-nl.academia.edu/MartijnAWijnhoven (VU University Amsterdam) Aleksei Moskvin https://independent.academia.edu/AlekseiMoskvin https://sketchfab.com/alekseimoskvin1/ Mariia Moskvina https://independent.academia.edu/MariiaMoskvina https://sketchfab.com/mariia89 (Saint Petersburg State University of Industrial Technologies and Design) Source: Objaverse 1.0 / Sketchfab
Armour from Gjermundbu: 3D reconstruction
The 3D model presents a digital reconstruction of solid and riveted rings of archaeological mail armour. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina and Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven DOI: https://doi.org/10.13140/RG.2.2.32427.16164 Source: Objaverse 1.0 / Sketchfab
Crinoline (1860, 32 hoops) - a 3D reconstruction
The 3D model presents a digital reconstruction of a historical crinoline - a special framework used to expand the fullness of the skirt in the mid 19th century. The crinoline is presented in a historical photograph. It has 32 hoops and 11 ribbons. A new method of parameterisation was applied to reproduce the shape and construction of the hoops, ribbons and belt (for further details see https://doi.org/10.1080/00405000.2019.1621042). The authors of the 3D model are Aleksei Moskvin https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina https://independent.academia.edu/MariiaMoskvina (Saint Petersburg State University of Industrial Technologies and Design) DOI: http://dx.doi.org/10.13140/RG.2.2.28510.56649 The authors thank Prof. Victor Kuzmichev from Ivanovo State Polytechnic University for his important contribution to this reconstruction. Source: Objaverse 1.0 / Sketchfab
Piquía mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. Subsequently the specimen of mail was tested in VR to reveal its physical and mechanical properties. For further details see https://doi.org/10.1016/j.culher.2020.12.002 The authors of the reconstruction are Aleksei Moskvin https://independent.academia.edu/AlekseiMoskvin https://sketchfab.com/alekseimoskvin1/ Mariia Moskvina https://independent.academia.edu/MariiaMoskvina https://sketchfab.com/mariia89 (Saint Petersburg State University of Industrial Technologies and Design) Martijn A. Wijnhoven https://vu-nl.academia.edu/MartijnAWijnhoven (VU University Amsterdam) Source: Objaverse 1.0 / Sketchfab
Xanten mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina and Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven Source: Objaverse 1.0 / Sketchfab
Fluitenberg mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. Subsequently the specimen of mail was tested in VR to reveal its physical and mechanical properties. For further details see https://doi.org/10.1016/j.culher.2020.12.002 The authors of the reconstruction are Martijn A. Wijnhoven https://vu-nl.academia.edu/MartijnAWijnhoven (VU University Amsterdam) Aleksei Moskvin https://independent.academia.edu/AlekseiMoskvin https://sketchfab.com/alekseimoskvin1/ Mariia Moskvina https://independent.academia.edu/MariiaMoskvina https://sketchfab.com/mariia89 (Saint Petersburg State University of Industrial Technologies and Design) Source: Objaverse 1.0 / Sketchfab
Gammertingen mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric from Gammertingen. Location: Landesmuseum Württemberg https://www.landesmuseum-stuttgart.de/ https://sketchfab.com/lmwstuttgart To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina and Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven Original source: https://skfb.ly/oq88U Source: Objaverse 1.0 / Sketchfab
Armour from Piquía: 3D reconstruction
The 3D model presents a digital reconstruction of solid and riveted rings of archaeological mail armour. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina and Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven DOI: https://doi.org/10.13140/RG.2.2.30749.44005 Source: Objaverse 1.0 / Sketchfab
Belt from Vimose: 3D reconstruction
The 3D model presents a digital reconstruction of solid and riveted rings of archaeological mail armour. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina DOI: https://doi.org/10.13140/RG.2.2.20683.11041 Source: Objaverse 1.0 / Sketchfab
Armour from Stari Jankovci: 3D reconstruction
The 3D model presents a digital reconstruction of solid and riveted rings of archaeological mail armour. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina DOI: https://doi.org/10.13140/RG.2.2.25716.27529 Source: Objaverse 1.0 / Sketchfab
Armour from Xanten: 3D reconstruction
The 3D model presents a digital reconstruction of solid and riveted rings of archaeological mail armour. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina and Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven DOI: https://doi.org/10.13140/RG.2.2.13972.22406 Source: Objaverse 1.0 / Sketchfab
Kunzing mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. Subsequently the specimen of mail was tested in VR to reveal its physical and mechanical properties. For further details see https://doi.org/10.1016/j.culher.2020.12.002 The authors of the reconstruction are Martijn A. Wijnhoven https://vu-nl.academia.edu/MartijnAWijnhoven (VU University Amsterdam) Aleksei Moskvin https://independent.academia.edu/AlekseiMoskvin https://sketchfab.com/alekseimoskvin1/ Mariia Moskvina https://independent.academia.edu/MariiaMoskvina https://sketchfab.com/mariia89 (Saint Petersburg State University of Industrial Technologies and Design) Source: Objaverse 1.0 / Sketchfab
Anatomical insights into fish terrestrial locomotion: a study of barred mudskipper (Periophthalmus argentilineatus) fins based on μCT 3D reconstructions
<p>Mudskippers are a group of extant ray-finned fishes with an amphibious lifestyle and serve as exemplars for understanding the evolution of amphibious capabilities in teleosts. A comprehensive anatomical profile of both the soft and hard tissues within their propulsive fins is essential for advancing our understanding of terrestrial locomotor adaptations in fish. Despite the ecological significance of mudskippers, detailed data on their musculoskeletal anatomy remains limited. In the present research, we utilized contrast-enhanced high-resolution micro-computed tomography (μCT) imaging to investigate the barred mudskipper, <em>Periophthalmus argentilineatus</em>. This technique enabled detailed reconstruction and quantification of the morphological details of the pectoral, pelvic, and caudal fins of this terrestrial mudskipper, facilitating comparison with its aquatic relatives. Our findings reveal that <em>P. argentilineatus</em> has undergone complex musculoskeletal adaptations for terrestrial movement, including an increase in muscle complexity and muscle volume, as well as the development of specialized structures like aponeuroses for pectoral fin extension. Skeletal modifications are also evident, with features such as a reinforced shoulder-pelvic joint and thickened fin rays. These evolutionary modifications suggest biomechanically advanced fins capable of overcoming the gravitational challenges of terrestrial habitats, indicating a strong selective advantage for these features in land-based environments. The unique musculoskeletal modifications in the fins of mudskippers like <em>P. argentilineatus</em>, compared to their aquatic counterparts, mark a critical evolutionary shift toward terrestrial adaptations. This study not only sheds light on the specific anatomical changes facilitating this transition but also offers broader insights into the early evolutionary mechanisms of terrestrial locomotion, potentially mirroring the transformative journey from aquatic to terrestrial life in the lineage leading to tetrapods.</p>
ALab-R 3D Reconstruction Dataset
<p>Creating per-pixel-accurate ground truth from real images for various 3D scene reconstruction tasks can be challenging, especially when the mesh topology needs to be close to production-level assets. To address this issue, we present a photorealistic synthetic dataset created from the Animal Logic ALab project and rendered using Blender. SED creator was used to generate the scenes</p>
Idealized wave data in support of Directional Breaking Kinematics Observations from 3D Stereo Reconstruction of Ocean Waves
<p>You will find the WaveWatchIII data output from idealized solutions of Romero 2019, ST4 and ST6</p> <p>Data are in Netcdf format and include metadata.</p> <p>Each file corresponds to a duration-limited solution with constant wind speed of 13 m/s</p>
Piquía mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. Subsequently the specimen of mail was tested in VR to reveal its physical and mechanical properties. For further details see https://doi.org/10.1016/j.culher.2020.12.002 The authors of the reconstruction are Martijn A. Wijnhoven https://vu-nl.academia.edu/MartijnAWijnhoven (VU University Amsterdam) Aleksei Moskvin https://independent.academia.edu/AlekseiMoskvin https://sketchfab.com/alekseimoskvin1/ Mariia Moskvina https://independent.academia.edu/MariiaMoskvina https://sketchfab.com/mariia89 (Saint Petersburg State University of Industrial Technologies and Design) Source: Objaverse 1.0 / Sketchfab
Vimose coat mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. Subsequently the specimen of mail was tested in VR to reveal its physical and mechanical properties. For further details see https://doi.org/10.1016/j.culher.2020.12.002 The authors of the reconstruction are Aleksei Moskvin https://independent.academia.edu/AlekseiMoskvin https://sketchfab.com/alekseimoskvin1/ Mariia Moskvina https://independent.academia.edu/MariiaMoskvina https://sketchfab.com/mariia89 (Saint Petersburg State University of Industrial Technologies and Design) Martijn A. Wijnhoven https://vu-nl.academia.edu/MartijnAWijnhoven (VU University Amsterdam) Source: Objaverse 1.0 / Sketchfab
Gammertingen mail fabric: 3D reconstruction
The 3D model presents a digital reconstruction of archaeological mail fabric from Gammertingen. Location: Landesmuseum Württemberg https://www.landesmuseum-stuttgart.de/ https://sketchfab.com/lmwstuttgart To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina and Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven Source: Objaverse 1.0 / Sketchfab
Belt from Vimose: 3D reconstruction
The 3D model presents a digital reconstruction of solid and riveted rings of archaeological mail armour. To create 3D models of the rings, we used polygonal modelling functions of Blender software. In order to record the relevant measurements of the mail rings, we used a list of parameters. This list includes 11 parameters for a riveted ring and four parameters for a solid ring. The accuracy of the digital replicas of the rings was 0.01 mm. The authors of the reconstructions are Aleksei Moskvin (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/AlekseiMoskvin Mariia Moskvina (Saint Petersburg State University of Industrial Technologies and Design) https://independent.academia.edu/MariiaMoskvina and Martijn A. Wijnhoven (VU University Amsterdam) https://vu-nl.academia.edu/MartijnAWijnhoven DOI: https://doi.org/10.13140/RG.2.2.20683.11041 Source: Objaverse 1.0 / Sketchfab
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.