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ShareScore release 0.9.0
Dataset results
69 results for “Brachypodium; Brachypodium distachyon”
Small RNA of the model grass Brachypodium distachyon
GEO Series GSE20195. Brachypodium distachyon. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Effects of karrikins and the strigolactone analogue GR24 on the transcriptome of Brachypodium distachyon seedlings
GEO Series GSE174000. Brachypodium distachyon. 36 samples. Type: Expression profiling by high throughput sequencing.
affy_brachy_2011_11-Transcriptomics analysis of DON and Fusarium graminearum response in Brachypodium distachyon
GEO Series GSE50665. Brachypodium; Brachypodium distachyon. 9 samples. Type: Expression profiling by array.
Transcriptomic study (RNAseq) of diurnal expression of Brachypodium distachyon ecotypes Bd21 and Bd21-3 under submergence stress
GEO Series GSE215159. Brachypodium distachyon. 89 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic study (RNAseq) of Brachypodium distachyon ecotypes Bd21 and Bd2-3 under submergence stress
GEO Series GSE74222. Brachypodium distachyon. 12 samples. Type: Expression profiling by high throughput sequencing.
ChIP-Seq profiling of ELF3,PRR37 and PHYC in response to photoperiod change at different ZTime in Brachypodium distachyon
GEO Series GSE128206. Brachypodium distachyon. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptional profiling of roots and shoots from Brachypodium distachyon seedlings flown on the ISS
Most major cereal grain crops are monocots. Yet, most investigations of plant adaptation to the spaceflight environment have been carried out on the dicotyledonous model plant, Arabidopsis thaliana. It remains unknown whether the conclusions from such studies can be extrapolated to monocotyledonous plants. To fill this knowledge gap, seedlings of three different accessions of Brachypodium distachyon (Bd21, Bd21-3, and Gaz8), a model for temperate grasses including cereal crops, were grown on the International Space Station in the Veggie hardware and on the ground in matched conditions. To synchronize germination, seedlings were grown for 24 hours in red light. Then, seedlings were grown with green/blue/red light using a 24 hour photo period for 4 additional days. At this point, seedlings were harvested and placed in room temperature RNAlater for 24 hours before being moved to -80 C for storage and later dissection into roots and shoots. This dataset features ribodepleted RNA-seq data from the Bd21, Bd21-3 and Gaz8 accessions.
Comparative RNA-sequencing of Brachypodium distachyon wild-type and bdmute mature leaf zones
GEO Series GSE206682. Brachypodium distachyon. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional responses to protoplasting in the early leaf developmental zone of Brachypodium distachyon
GEO Series GSE306756. Brachypodium distachyon. 6 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.