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143
datasets available to search
ShareScore release 0.9.0
Dataset results
143 results for “Directed Interactions”
WDR5 promotes histone deacetylation via direct interaction with HDAC2 in human CCA cells.
GEO Series GSE162968. Homo sapiens. 2 samples. Type: Other.
Direct RNA-RNA interaction between Neat1 and RNA targets, as a mechanism for RNAs paraspeckle retention
GEO Series GSE160069. Rattus norvegicus. 6 samples. Type: Other.
The phage-encoded protein PIT2 impacts bacterial quorum sensing in Pseudomonas aeruginosa by direct interaction with LasR
GEO Series GSE227677. Pseudomonas aeruginosa. 12 samples. Type: Expression profiling by high throughput sequencing.
The 8q24 Enhancer Region including rs6983267 Directly Interacts with Promoter of Oncogenic LncRNA CARLo-5
GEO Series GSE48877. Homo sapiens. 6 samples. Type: Expression profiling by array.
The poly(A) polymerase PAPS1 interacts with the RNA-directed DNA methylation pathway in sporophyte and pollen development [small RNA]
GEO Series GSE127992. Arabidopsis thaliana. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
miR-126-5p by direct targeting of JNK-interacting protein-2 (JIP-2) plays a key role in Theileria-infected macrophage virulence
GEO Series GSE97706. Bos taurus. 17 samples. Type: Non-coding RNA profiling by high throughput sequencing.
MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons
GEO Series GSE230716. Homo sapiens. 66 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Direct analysis of the embryo-maternal interactions in a 3D biomimetic implantation niche
GEO Series GSE151329. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
The poly(A) polymerase PAPS1 interacts with the RNA-directed DNA methylation pathway in sporophyte and pollen development
GEO Series GSE127993. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
ncRNA transcription-induced changes in nuclear architecture directs with high precision enhancer-promoter interaction
GEO Series GSE90958. Mus musculus. 80 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other; Methylation profiling by high throughput sequencing.
Oligonucleotide-directed proximity-interactome mapping (O-MAP): A unified method for discovering RNA-interacting proteins, transcripts and genomic loci in situ [Xist OMAP RIP]
GEO Series GSE217565. Mus musculus x Mus spretus. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma
GEO Series GSE83328. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A fine kinetic balance of interactions directs transcription factor hubs to genes
GEO Series GSE264096. Drosophila melanogaster. 63 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
On the discovery of ADRAM, an experience-dependent long noncoding RNA that drives fear extinction though direct interaction with the chaperone protein 14-3-3
GEO Series GSE181706. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Marker-based CRISPR screening reveals a direct MED12-p63 interaction that activates basal identity in pancreatic ductal adenocarcinoma
GEO Series GSE229062. Homo sapiens. 276 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Oligonucleotide-directed proximity-interactome mapping (O-MAP): A unified method for discovering RNA-interacting proteins, transcripts and genomic loci in situ [ITS OMAP ChIP]
GEO Series GSE217562. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
GEO Series GSE59699. Arabidopsis thaliana. 36 samples. Type: Expression profiling by high throughput sequencing.
SARS-CoV-2 Nucleocapsid protein attenuates stress granule formation and interacts directly with mRNAs to impair host stress response (iCLIP-Seq)
GEO Series GSE171008. Homo sapiens. 18 samples. Type: Other.
RNA-directed DNA Methylation is associated with gene expression via chromosomal Interactions
GEO Series GSE64389. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
Data from: Phenotypic plasticity in female mate choice behavior is mediated by an interaction of direct and indirect genetic effects in Drosophila melanogaster
Female mate choice is a complex decision-making process that involves many context-dependent factors. In Drosophila melanogaster, a model species for the study of sexual selection, indirect genetic effects (IGEs) of general social interactions can influence female mate choice behaviors, but the potential impacts of IGEs associated with mating experiences are poorly understood. Here, we examined whether the IGEs associated with a previous mating experience had an effect on subsequent female mate choice behaviors and quantified the degree of additive genetic variation associated with this effect. Females from 21 different genetic backgrounds were housed with males from one of two distinct genetic backgrounds for either a short (3 hr) or long (48 hr) exposure period and their subsequent mate choice behaviors were scored. We found that the genetic identity of a previous mate significantly influenced a female's subsequent interest in males and preference of males. Additionally, a hemiclonal analysis revealed significant additive genetic variation associated with experience-dependent mate choice behaviors, indicating a genotype-by-environment interaction for both of these parameters. We discuss the significance of these results with regard to the evolution of plasticity in female mate choice behaviors and the maintenance of variation in harmful male traits.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.