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TABLE 5 in A New Species of the Rodent Genus Oecomys (Cricetidae: Sigmodontinae: Oryzomyini) from Eastern Bolivia, with Emended Definitions of O. concolor (Wagner) and O. mamorae (Thomas)

TABLE 5 Occurrence of Alisphenoid Struts (- / - = struts absent both sides; - /+ = strut present on one side; +/+ = struts present both sides.)<table><thead><tr><th></th><th colspan="3">Alisphenoid Struts</th></tr></thead><tbody><tr><th>Species and Country</th><td>- / -</td><td>- /+</td><td>+/+</td></tr><tr><th colspan="4">O. concolor</th></tr><tr><th>Brazil Colombia Venezuela Totals</th><td>1 0 0 1</td><td>0 1 0 1</td><td>25 0 18 43</td></tr><tr><th colspan="4">O. mamorae</th></tr><tr><th>Bolivia Brazil Paraguay Totals</th><td>29 1 7 37</td><td>1 0 0 1</td><td>0 0 0 0</td></tr><tr><th colspan="4">O. sydandersoni</th></tr><tr><th>Bolivia</th><td>1</td><td>2</td><td>23</td></tr></tbody></table>

Natterer collected this species at the Curicuriari River in northwestern Brazil. in A New Species of the Rodent Genus Oecomys (Cricetidae: Sigmodontinae: Oryzomyini) from Eastern Bolivia, with Emended Definitions of O. concolor (Wagner) and O. mamorae (Thomas)

Natterer collected this species at the Curicuriari River in northwestern Brazil.<table><thead><tr><th></th><th>H. concolor</th><th></th><th>H. Anguya</th></tr></thead><tbody><tr><th>Body</th><td>4 " 10 "</td><td>|</td><td>5 " 8 "</td></tr><tr><th>Tail</th><td>4 9</td><td>|</td><td>5 6</td></tr><tr><th>Ear</th><td>0 6 2/2 [sic]</td><td>|</td><td>0 8</td></tr><tr><th>Hindfoot</th><td>1 0</td><td>|</td><td>1 3</td></tr></tbody></table>Natterer collected this species at the Curicuriari River in northwestern Brazil.

TABLE 3 in A New Species of the Rodent Genus Oecomys (Cricetidae: Sigmodontinae: Oryzomyini) from Eastern Bolivia, with Emended Definitions of O. concolor (Wagner) and O. mamorae (Thomas)

TABLE 3 Results of Three-group Discriminant Function Analysis of Adult Oecomys sp. novum, O. concolor, and O. mamorae (Based on 17 log-transformed craniodental variables; see Materials and Methods and fig. 3.)<table><thead><tr><th></th><th colspan="2">Correlations</th></tr></thead><tbody><tr><th>Variable</th><td>CV 1</td><td>CV 2</td></tr><tr><th>ONL</th><td>- 0.31</td><td>0.66***</td></tr><tr><th>ZB</th><td>0.08</td><td>0.41**</td></tr><tr><th>BBC</th><td>- 0.23</td><td>0.51***</td></tr><tr><th>DBC</th><td>0.33</td><td>0.24</td></tr><tr><th>BOC</th><td>- 0.56***</td><td>0.50***</td></tr><tr><th>IOB</th><td>0.75***</td><td>0.12</td></tr><tr><th>LR</th><td>- 0.28</td><td>0.47***</td></tr><tr><th>BR</th><td>0.19</td><td>0.61***</td></tr><tr><th>BZP</th><td>- 0.37*</td><td>0.35*</td></tr><tr><th>PPL</th><td>- 0.61***</td><td>0.26</td></tr><tr><th>BPL</th><td>0.20</td><td>0.83***</td></tr><tr><th>LD</th><td>0.03</td><td>0.41**</td></tr><tr><th>LIF</th><td>- 0.63***</td><td>0.07</td></tr><tr><th>BIF</th><td>- 0.09</td><td>- 0.45***</td></tr><tr><th>BBP</th><td>0.01</td><td>0.52***</td></tr><tr><th>CLM</th><td>- 0.47***</td><td>0.72***</td></tr><tr><th>WM1</th><td>- 0.09</td><td>0.54***</td></tr><tr><th>Canonical correlations</th><td>0.93</td><td>0.86</td></tr><tr><th>Eigenvalue</th><td>6.15</td><td>2.77</td></tr><tr><th>% Variance</th><td>68.9</td><td>31.1</td></tr></tbody></table>* = P # 0.05; ** = P # 0.01; *** = P # 0.001

Natterer fand diese Art am Flusse Curicuriari im nordwestlichen Brasilien. in A New Species of the Rodent Genus Oecomys (Cricetidae: Sigmodontinae: Oryzomyini) from Eastern Bolivia, with Emended Definitions of O. concolor (Wagner) and O. mamorae (Thomas)

Natterer fand diese Art am Flusse Curicuriari im nordwestlichen Brasilien.<table><thead><tr><th></th><th>H. concolor</th><th></th><th>H. Anguya</th></tr></thead><tbody><tr><th>Körper</th><td>4 " 10 "</td><td>|</td><td>5 " 8 "</td></tr><tr><th>Schwanz</th><td>4 9</td><td>|</td><td>5 6</td></tr><tr><th>Ohren</th><td>0 6 2/2 [sic]</td><td>|</td><td>0 8</td></tr><tr><th>Hinterfuss</th><td>1 0</td><td>|</td><td>1 3</td></tr></tbody></table>H. fulvus, subtus abrupte albus, pedibus fuscentibus; cauda nuda longitudine corporis; pilis gastraei unicoloribus.Anguya sehr nahe verwandt, aber die Färbung der Oberseite ist bei ihr weit lebhafter, mit mehr Roth beigemischt, dagegen mit weniger Schwarz gesprenkelt. Die Unterseite, welche schön weiss ist, hat lauter einfarbige Haare, dagegen H. Anguya zweifarbige; ferner fehlt die graue Färbung auf den Wangen des letzteren und die Fusse sind mit bräunlichen Haaren besetzt; der nackte, nur mit kurzen Härchen beflogene Schwanz hat eine dunkle Färbung. Die Schnurren sind schwarz und die Ohren wie bei H. Anguya behaart.Natterer fand diese Art am Flusse Curicuriari im nordwestlichen Brasilien.

opencc-zeroDec 2013View details →

FIG. 2 in Eneopterinae crickets from Costa Rica: an emended list (Orthoptera, Grylloidea)

FIG. 2. — Male of Ponca venosa Hebard, 1928 from Costa Rica, La Selva. Photograph by T. Robillard.

opencc-by-4.0Jan 2019View details →

Figure 1 in A new species of Maldivea Gerlach, 1962 (Nematoda, Oxystominidae) from Felidhoo atoll (Maldives, Indian Ocean) and an emended diagnosis of the sub-family and genus

Figure 1. Type localities of Maldivea xarifae and M. complexa n. sp.

opencc-by-4.0Jan 2019View details →

Figure 2 in A new species of Maldivea Gerlach, 1962 (Nematoda, Oxystominidae) from Felidhoo atoll (Maldives, Indian Ocean) and an emended diagnosis of the sub-family and genus

Figure 2. Drawing of the total body of the male of Maldivea complexa n. sp. Scale bar: 100 µm.

opencc-by-4.0Jul 2023View details →

DADA2 formatted Silva SSU taxonomic training data (Silva version 138.1) with emended description of the genus Lactobacillus Beijerinck 1901

These training fasta files are derived from the Silva 138.1 prokaryotic SSU taxonomic training data formatted for DADA2 (from <a href="https://zenodo.org/record/4587955">https://zenodo.org/record/4587955</a>). The species assignment file contains changes in species names according to <a href="https://doi.org/10.1099/ijsem.0.004107">Zheng et al. 2020</a> based on data from <a href="https://github.com/swuyts/lactotax/tree/master">Lactotax</a> (file <a href="https://github.com/swuyts/lactotax/raw/master/data/2023_05_30.xlsx">2023_05_30.xlsx</a>). The script in R for making changes in species names is in the silva.R file. Please cite one or both of the Silva references, the DADA2 paper (reference below), and the Zenodo record for this specific version in your Methods or published source code to record the specific taxonomic database files used in your analysis.

opencc-by-4.0Dec 2020View details →

Fig. 1 in Taxonomic Revision and Classification of Extant Holococcolithophores Previously Placed in the Genus Anthosphaera Kamptner emend. Kleijne 1991

Fig. 1. Map of the sampling locations, where Anthosphaera was observed.

opennotspecifiedFeb 2020View details →

FIGURE 4 in A new species of Cephalanticoma (Enoplida: Anticomidae) from Brazilian coast (Atlantic Ocean), with emended diagnosis and dichotomous key to the genus

FIGURE 4. Cephalanticom rugatusa sp. n.: (A) Paratype female #1, overview; (B) Anterior region (cephalic arrangement, amphidial fovea, head capsule and cervical setae); (C) anterior region (pharyngeal region, ventral gland and nerve ring); (D) reproductive system.

opennotspecifiedFeb 2020View details →

FIGURE 2 in A new species of Cephalanticoma (Enoplida: Anticomidae) from Brazilian coast (Atlantic Ocean), with emended diagnosis and dichotomous key to the genus

FIGURE 2. Cephalanticoma rugatusa sp. n.: (A) Paratype male #4, anterior region; (B) holotype male, anterior region (head capsule); (C) anterior region (amphidial fovea); (D) anterior region (cervical setae); (E) anterior region (pharyngeal region and ventral gland); (F) anterior region (ventral gland); (G) tail.

FIGURE 5 in An unusual new species of Pentaneura Philippi (Diptera: Chironomidae) from northeastern Brazil, with an emended diagnosis to the genus

FIGURE 5. Pentaneura herbeti sp. nov., larva. (A) Chaetotaxy of the head, ventrally. (B) Chaetotaxy of the head, dorsally. (C) Basal segment of the maxillary palp. (D) Mandible apex. (E) Submentum (F) Ligula and paraligula. (G) Posterior end.

FIGURE 2 in An unusual new species of Pentaneura Philippi (Diptera: Chironomidae) from northeastern Brazil, with an emended diagnosis to the genus

FIGURE 2. Pentaneura herbeti sp. nov., male. (A) Hypopygium, dorsal view. (B) Gonostylus. (C) Hypopygium, the arrow indicates the dorsal lamella, dorsal view.

FIGURE 6 in An unusual new species of Pentaneura Philippi (Diptera: Chironomidae) from northeastern Brazil, with an emended diagnosis to the genus

FIGURE 6. Second-order stream, in Parnamirim/RN, Brazil, where the immature stages of Pentaneura herbeti sp. nov. were collected.

FIGURE 4 in An unusual new species of Pentaneura Philippi (Diptera: Chironomidae) from northeastern Brazil, with an emended diagnosis to the genus

FIGURE 4. Pentaneura herbeti sp. nov., pupa. (A) Thoracic horn, lateral view. (B) Wing sheath. (C) Abdomen, dorsal view. (D) Anal lobe, dorsal view.

opencc-zeroDec 2016View details →

dryad32/100

Data from: Reinstatement, redescription, and emending of Spiranthes triloba (Orchidaceae): solving a 118 year old cryptic puzzle

Spiranthes (Orchidaceae) is a primarily North American genus that has traditionally presented numerous taxonomic challenges. Many species display marked intra-species morphological variation and/or inter-species morphological similarities, such that cryptic speciation may be common. Molecular phylogenetic, morphological, field, and herbarium research concerning the delimitation of Spiranthes odorata necessitates the reinstatement and redescription of Spiranthes triloba, a name alternately synonymized under Spiranthes cernua and Spiranthes odorata for more than a century. While lost under synonymy, plants matching the morphology of Spiranthes triloba were ambiguously described as Spiranthes ×itchetuckneensis and Spiranthes ×folsomii, and these are here synonymized. Although the species has a descriptive specific epithet, the labellum of the holotype is decidedly not tri-lobed; Spiranthes triloba is redescribed and emended here so as to reflect its actual morphology. Spiranthes triloba is restricted to frequently burned calcareous prairies and flatwoods of Florida, and likely warrants protection at the state level. A key is provided to distinguish this species from other Spiranthes found in Florida, and a lectotype is designated for S. ×folsomii.

opennotspecifiedDec 2004View details →

FIGURES 1–3. 1 in Emendation of the subfamilies Caiguiriinae and Pygidiopsinae (Digenea) with a redescription of Caiguiria anterouteria (Digenea: Heterophyidae) and reassignment of Pygydiopsis crassus to Caiguiria

FIGURES 1–3. 1, Caiguiria anterouteria from experimental infections of kittens by Nasir & Díaz (1971) from Venezuela, ventral view of holotype; 2, Male genital complex of C. anterouteria; 3, Female genital complex of C. anterouteria. Abbreviations: A, acetabulum; F, vitelline follicles; G, gonotyl; L, Laurer's canal; M, Mehlis' gland; O, ovary; R, seminal receptacle, S, seminal vesicle; T, testis; U, uterus; V, excretory vesicle. Scale bars: 1, 146 m; 2, 90 m; 3, 120 m.

opennotspecifiedDec 2005View details →

FIGURES 1–5 in Denopelopia Roback & Rutter from China with emendation of the generic diagnosis (Diptera: Chironomidae: Tanypodinae)

FIGURES 1–5. Denopelopia bractea sp. n. male imago. 1, wing. 2, both semilyrate tibial spurs on mid leg. 3, scalelike setae and short spur on fore tibia. 4, tibial spurs and tibial comb on hind leg. 5, hypopygium.

opennotspecifiedDec 2008View details →

FIGURE 6 in Rediscovery of Juliomys pictipes (Rodentia: Cricetidae) in Argentina: emended diagnosis, geographic distribution, and insights on genetic structure

FIGURE 6. Selected cranial traits in adult (except noted) Juliomys pictipes (CIES-M 23). A. Rostrum in dorsal view: note the inconspicuous zygomatic notches and broad zygomatic root; B. Interorbital region: the arrow indicates incomplete fusion in the anterior part of the interfrontal suture; C. Interorbital region in a juvenile specimen (CNP 895); D. Rostrum in lateral view: note the almost absence of upper free border in the zygomatic plate; E. Interfrontal depression; F. Mesopterygoid fossa; G. Palatal and postpalatal region of a juvenile specimen (CNP 895): note the complete ossification of the mesopterygoid fossa roof; H. Temporal region; I. Braincase; J. Auditory capsule: note the extension of the meatus; K. Squamosal-alisphenoid region; L. Upper first molar detail: note the crested corona and the well developed mesoloph. Abbreviations: acl = anterior opening alisphenoid canal, bu = auditory capsule, cc = carotid canal, d = interfrontal depression, f = frontal, fo = foramen ovale, i = interparietal, m = maseteric tubercle, M1 = first upper molar, M2 = second upper molar, M3 = third upper molar, ma = meatus, mb = trough for masticatory-buccinator nerve, mf = mesopterygoid fossa, ms mesoloph, mt = mastoid, mx = maxilla, na = nasal, oc = occipital, p = lateral portion of the parietal, pa = parapterygoid fossa, pm = premaxilla, ppp = postpalatal posterolateral pit, pr = parietal, r = zygomatic root, sb = supernumerary bone, sq = squamosal, t = tegmen tympani, zp = zygomatic plate.