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192 results for “Fagus”
Figure 3 in Basilaphelenchus hyrcanus n. sp. (Rhabditida: Tylaphelenchinae) associated with bark of a beech tree (Fagus orientalis Lipsky) from northern Iran
Figure 3: Bayesian 50% majority rule consensus tree inferred from the small subunit (SSU) rDNA gene sequences of BaSilaphelenChUS hyrCanUS n. sp. under the GTR + G + I model. Bayesian posterior probabilities (BPP) and maximum likelihood bootstrap (ML BS) values greater than 0.50 and 50, respectively, are given for appropriate clades in the pattern of BPP/ML BS. The new species taxon is represented in bold.
Figure 8. Fagaceae. Fagus dodgei. A‒C in A late Eocene wood assemblage from the Crooked River Basin, Oregon, USA
Figure 8. Fagaceae. Fagus dodgei. A‒C. Diffuse- to semi-ring-porous wood; vessels predominantly solitary; rays of two size classes; diffuse axial parenchyma, thick- to very thick-walled fibers, TS, UF 278-84888 (A), UF 278-84873 (B, C). D. Simple perforation plate (pp); fiber with distinctly bordered pits (FP); tyloses segmenting a vessel element (VE), RLS, UF 278-84896. E. Scalariform perforation plate; scalariform intervessel pitting, RLS, UF 278-84896. F. Scalariform intervessel pitting; procumbent ray cells, RLS, UF 278-84896. G. Intervessel pitting, TLS, UF 278-84896. H. Vessel-ray parenchyma pitting with reduced borders, UF 278-84896. I–K. Two size classes of rays, TLS, UF 278-84896 (I), UF 278-84873 (J), UF 278-84888 (K). Scale bars=500 µm in I, J, K; 200 µm in A, B; 100 µm in C; 50 µm in D, F; 20 µm in E, G, H.
Text-fig. 5. Palynomorphs from Late Miocene deposits. Gaverdovsky section, North Caucasus. a – Abies minor ANANOVA; b – Picea sp.; c – Keteleeria cf. dubia CHLONOWA; d – Taxodiaceae gen.; e – Podocarpidites podocarpoides (THIERGART) KRUTZSCH; f – Pinus labdaca KRUTZSCH; g – Fagus cf. tenella PAN.; h – Juglans gracilis ANANOVA; I – Carya cf. spackmania TRAV.; j – Pterocarya sp.; k – Ulmus sp.; l – Zelkova cf. miocenica ANANOVA; m – Liquidambar sp.; n – Pediastrum simplex MEYEN; o – Spirogyra sp.; p – redeposited Palaeogene dinocyst Wilsonidinium lineidentatum (DEFLANDRE et COOKSON, 1955) LENTIN et WILLIAMS, 1976. Scale bar 40 μm for all photographs. in Late Miocene (Early Turolian) Vertebrate Faunas And Associated Biotic Record Of The Northern Caucasus: Geology, Taxonomy, Palaeoenvironment, Biochronology
Text-fig. 5. Palynomorphs from Late Miocene deposits. Gaverdovsky section, North Caucasus. a – Abies minor ANANOVA; b – Picea sp.; c – Keteleeria cf. dubia CHLONOWA; d – Taxodiaceae gen.; e – Podocarpidites podocarpoides (THIERGART) KRUTZSCH; f – Pinus labdaca KRUTZSCH; g – Fagus cf. tenella PAN.; h – Juglans gracilis ANANOVA; I – Carya cf. spackmania TRAV.; j – Pterocarya sp.; k – Ulmus sp.; l – Zelkova cf. miocenica ANANOVA; m – Liquidambar sp.; n – Pediastrum simplex MEYEN; o – Spirogyra sp.; p – redeposited Palaeogene dinocyst Wilsonidinium lineidentatum (DEFLANDRE et COOKSON, 1955) LENTIN et WILLIAMS, 1976. Scale bar 40 μm for all photographs.
Influence of European beech (Fagus sylvatica) rot hole habitat characteristics on invertebrate community structure and diversity - Dataset
<p>The data and R scripts pertinent to the Journal of Insect Science manuscript titled "Influence of European beech (<em>Fagus sylvatica</em>) rot hole habitat characteristics on invertebrate community structure and diversity". Environmental variables are given in "Rot Hole and Site Data", whilst community data are given as counts in "Rot Hole Community Data - counts" and as relative abundance in "Rot Hole Community Data - relative abundances".</p>
Supplementary material for Dynamics of rare earth elements and associated major and trace elements during Douglas-fir (Pseudotsuga menziesii) and European beech (Fagus sylvatica L.) litter degradation
<p>Database and figures related to the results that are presented in the manusciript Montemagno et al. that will be submitted as research paper in the journal Copernicus/Biogeosciences.</p> <p>Title of the submission: Dynamics of Rare Earth Elements and associated major cations during Douglas-fir (Pseudotsuga menziesii) and European beech (Fagus sylvatica L.) litter degradation.</p> <p>Authorship: </p> <p>Alessandro Montemagno<sup>1,3</sup>, Christophe Hissler<sup>1</sup>, Johanna Ziebel<sup>2</sup>, Victor Bense<sup>3</sup>, Laurent Pfister<sup>1</sup>, Adriaan J. Teuling<sup>3</sup></p> <p><sup>1</sup>CATchment and ecohydrology research group (CAT/ENVISION/ERIN), Luxembourg Institute of Science and Technology, Belvaux, 4408, Luxembourg</p> <p><sup>2</sup>Biotechnologies and Environmental Analytics Platform (BEAP/ERIN), Luxembourg Institute of Science and Technology, Belvaux, 4408, Luxembourg</p> <p><sup>3</sup>Department of Environmental Sciences, subdivision Hydrology and Quantitative Water Management (HWQM), Wageningen University and Research, Droevendaalsesteeg 4, Wageningen, 6708 PB, The Netherlands</p> <p><em>Correspondence: </em>Alessandro Montemagno (<a href="mailto:alessandro.montemagno@list.lu">alessandro.montemagno@list.lu</a>), Christophe Hissler (<a href="mailto:christophe.hissler@list.lu">christophe.hissler@list.lu</a>)</p>
Data from: Historic land use modifies impacts of climate and isolation in rear edge European beech (Fagus sylvatica L.) populations
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Reproductive data Fagus sylvatica: Widespread masting breakdown in beech
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Simulated and observed timings of leaf senescence for <em>Fagus sylvatica</em> (L.) at selected European sites
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Interactive effects of sun-shade and dry-wet treatments on seedlings of four beech (Fagus sylvatica L.) provenances
<p>We tested whether seedlings of four beech provenances, from contrasting edaphoclimatic environments, expressed differences in trait responses to imposed water stress under sun and shade treatments. Populations from the southern range margin were expected to display greater water-stress tolerance and core populations faster growth rates in the absence of abiotic limitations.</p> <p>Seedlings germinated under controlled conditions and were grown under controlled light-x-watering treatment combinations comprising shade/sun (main plot factor) and well-watered/water-limited (split-plot factor) groups. Beech seedlings remained under the experimental conditions from May through to September.</p> <p>Multiple sampling of growth (height, branching, number of leaves, leaf length, and root collar diameter), and leaves traits reflecting photosynthetic productivity and stress tolerance were made during the spring and summer. Leaf level gas exchange was measured by IRGA, leaf pigmentation by multiple optical sensors, leaf water potential with a pressure chamber, as well as plants and leaf morphological traits at the end of the experiment.</p> <p>Methods and Results are described in detail in the manuscript: Title: <strong>Seedlings from marginal and core populations of European beech (<em>Fagus sylvatica </em>L.) respond differently to imposed drought and shade. </strong>Authors: Fang Wang, David Israel, José-Alberto Ramírez-Valiente, David Sánchez-Gómez, Ismael Aranda, Pedro J Aphalo, T Matthew Robson.</p> <p>Files added are:"OverallData.xlsx" are the raw leaf level data collected in the experiment for the traits recorded, arranged in spreadsheets according to measurement type. Sheets are: "SoilMoistureRData", "PARData", "GasExchangeFigureData", "LeafObsData", "GrowthData", "LeafTraitsFigureData".</p> <p>"SummaryData.xlsx" are the individual replicate plot level summary data (calculated from the OverallData in R) for use in statistical analyses. Sheets are: "comparison", "GasExchangeSummary", "LeafTraitsSummary".</p> <p>"FMIradiation1hrData.xlsx" and "FMIradiation10minData.xlsx" Downloaded FMI irradiance data for the period of the experiment from Kumpula Meteorological Station (at 1hr and at 10 min interval), organised and arranged in spreadsheets: FMIradiation....xlsx files</p> <p>"Statistical Tables.docx" are summaries of the statistical tables calculated from the experimental data.</p> <p>"Statistics.zip" contains individual excel files showing the statistical analyses, least squared means, and pairwise comparisons for each analysed trait, plus the statistical code used to run these analyses. One file put trait- these files are summarised in "Statistical Tables.docx"</p> <p>"Plasticity Index.docx" show the results of calculated plasticity index for each of the traits measured, and details of how this calculation was performed.</p>
Climate associated genetic variation in Fagus sylvatica and potential responses to climate change in the French Alps
<p><span><span><span><span><span><span><span><span><span><span><span>Local adaptation patterns have been found in many plants and animals, highlighting the genetic heterogeneity of species along their range of distribution. In the next decades, global warming is predicted to induce a change in the selective pressures that drive this adaptive variation, forcing a reshuffling of the underlying adaptive allele distributions. For species with low dispersion capacity and long generation time such as trees, the rapidity of the change could imped the migration of beneficial alleles and lower their capacity to track the changing environment. Identifying the main selective pressures driving the adaptive genetic variation is thus necessary when investigating species capacity to respond to global warming. In this study, we investigate the adaptive landscape of <i>Fagus sylvatica</i> along a gradient of populations in the French Alps. Using a double digest restriction-site associated DNA (ddRAD) sequencing approach, we identified 7,000 SNPs from 570 individuals across 36 different sites. A redundancy analysis (RDA)-derived method allowed us to identify several SNPs that were strongly associated with climatic gradients; moreover, we defined the primary selective gradients along the natural populations of <i>F. sylvatica</i> in the Alps. Strong effects of elevation and humidity, which contrast north-western and south-eastern site, were found and were believed to be important drivers of genetic adaptation. Finally, simulations of future genetic landscapes that used these findings allowed identifying populations at risk for <i>F. sylvatica </i>in the Alps, which could be helpful for future management plans. </span></span></span></span></span></span></span></span></span></span></span></p>
Supplementary data for Inter-provenance variability and phenotypic plasticity of wood and leaf traits related to hydraulic safety and efficiency in seven European beech (Fagus sylvatica L.) provenances differing in yield
<p>Dataset and supplementary file for <strong>Inter-provenance variability and phenotypic plasticity of wood and leaf traits related to hydraulic safety and efficiency in seven European beech (<em>Fagus sylvatica</em> L.) provenances differing in yield </strong>paper.</p> <p>The ANFS_data file includes individual level measurements of xylem safety and efficiency traits, leaf traits and growth among 7 provenances planted at two common garden sites in Germany and Slovakia. More details related to the methodology might be found in the published paper by Kurjak et al. 2024.</p> <p>The ANFS_supplementary file includes the test for differences in distance to tip between sites and provenances, based on the branch diameter-branch length scaling.</p>
Fagus grandifolia (Fagaceae) - fruit - as borne on the plant
Image of Fagus grandifolia (Fagaceae) - fruit - as borne on the plant
Fagus grandifolia (Fagaceae) - whole tree (or vine) - general
Image of Fagus grandifolia (Fagaceae) - whole tree (or vine) - general
Fagus grandifolia (Fagaceae) - leaf - whole upper surface
Image of Fagus grandifolia (Fagaceae) - leaf - whole upper surface
Fagus grandifolia (Fagaceae) - whole tree (or vine) - general
Image of Fagus grandifolia (Fagaceae) - whole tree (or vine) - general
Fagus grandifolia (Fagaceae) - whole tree (or vine) - general
Image of Fagus grandifolia (Fagaceae) - whole tree (or vine) - general
Mineral nitrogen nutrition of Fagus sylvatica L roots colonized by ectomycorrhizal fungi in native forest soil
<p>The aim of this study was to examine the transcription-level response of a symbiotic system comformed by the host tree <em>Fagus sylvatica</em> L (European beech) and the root-associated mycobiota to fluctuations in ammonium and nitrate availability in the soil. The experiment was conducted with young trees grown at a natural regeneration forest. We used <sup>15</sup>N stable isotopes in combination with DNA-based and RNA-based molecular methods and Illumina sequencing.</p> <p>We report data on the beech root-associated fungal community structure obtained by metabarcoding of the fungal ITS2 region, transcriptome data from the fungal community associated to the tree roots, and transcriptome data from <em>Fagus sylvatica</em> L in response to ammonium or nitrate application to the soil. We also report data from soil ammonium-N, soil-nitrate-N, tree and soil dry mass, root 15N, root N, root C, root carbohydrates, root ammonium-N, root nitrate-N, soil pH, and climate data from the experiment.</p>
Temporal changes in nutrients in forest soil and roots and root biomass of Fagus sylvatica after P and N fertilization
<p>We report data for nutrients in the organic layer and in mineral soil of Fagus sylvatica forests after P and N fertilization. We separated soil and roots and also report data for root biomass and nutrient contents in these soil layers. In addition, relative soil water contents and pH were measured. The samples were collected in three forests and repeatedly in spring and fall from 2016 to 2018. </p>
ddRAD sequencing of Fagus sylvatica sensu lato
<p>ddRAD sequencing data from Stacks (SNPs) along with corresponding information. Exon-only genotypes in file "genotypes_exons-only.7z".</p>
Data from: Mast seeding in European beech (Fagus sylvatica L.) is associated with reduced fungal sporocarp production and community diversity
<p>A time series of seed production data from European beech (<em>Fagus sylvatica</em>) was combined with a fungal census (1977 to 2006) from La Chanéaz Fungus Reserve to evaluate the relationship between mast seeding and fungal resource availability. Annual fungal species' counts, traits, contemporaneous weather and seed production data are available here, alongside the code used to complete the analyses.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.