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84 results for “Medaka”
Genome-wide transcriptome analysis of brain region (ventral part of telenchephalon, hypothalamus and pituitary) in medaka [Ribo-Seq]
GEO Series GSE119903. Oryzias latipes. 4 samples. Type: Expression profiling by high throughput sequencing.
Bisulfite sequencing of medaka egg methylomes
GEO Series GSE160094. Oryzias latipes. 6 samples. Type: Methylation profiling by high throughput sequencing.
Gene expression profiling of optic tectum neuroepithelial cells in adult medaka
GEO Series GSE80497. Oryzias latipes. 8 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide transcriptome analysis of the brain (ventral part of telenchephalon, hypothalamus and pituitary) of medaka (Oryzias latipes) kept under outdoor natural conditions over a period of two year
GEO Series GSE234401. Oryzias latipes. 50 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide transcriptome analysis of the brain (ventral part of telenchephalon, hypothalamus and pituitary) of medaka (Oryzias latipes) at the spring equinox, summer solstice, autumn equinox, and win
GEO Series GSE234400. Oryzias latipes. 48 samples. Type: Expression profiling by high throughput sequencing.
Medaka Osteoclast
During space flight bone mineral density is decreased by the influence of osteoclast activation which molecular mechanism is expectantly investigated. In the study of medaka bone development we investigated the system of vertebra formation and firstly identified the presence of osteoclasts in medaka. Moreover osteoclast rsorbing activity was affected by hypergravity indicating the possibility that we can investigate the effect of microgravity on osteoclasts in space. To find this effect we examine the alteration of osteoclast activity under microgravity with the histological analysis or the expression analysis by RNA in-situ hybridization. Furthermore since we have succeeded the establishment of the medaka osteoclast-specific transgenic lines we perform the in-vivo imaging analyses for gene expression and cell mobility. Finally to examine the gravity sensing system we employ tooth and bone as the high density organs which are highly sensitive to gravity and perform the histological analysis and the gene expression analysis of such gravity-sensitive tissues at surrounding pharyngeal teeth and supporting bone.
Comparative Transcriptomic Analysis of Adult Medaka Tissues Sampled after Adaptation to a Space Environment
To understand how humans adapt to space environments many experiments can be conducted on astronauts while they work aboard the Space Shuttle or the International Space Station (ISS). We also need animal experiments that can apply to human models and help prevent or solve the physical issues we face in space travel. The medaka is a suitable model fish for studying space adaptation because in the second International Microgravity Laboratory mission in 1994 adult fish mated successfully in space during 15 days of flight. In 2012 another space experiment Medaka Osteoclast was performed. Male and female fish (6 weeks old at launching) were maintained in the Aquatic Habitat system for 2 months in the ISS. The RNA-seq analysis of tissues from these fish will revealed tissue-specific responsiveness and common stress responses during space adaptation.
Silver nanocolloids affects glycosylation in medaka fish to cause embryonic malformation.
GEO Series GSE106163. Oryzias latipes. 6 samples. Type: Expression profiling by array.
Variation of the genomic expression pattern after exposed to 17beta-estradiol in Japanese medaka (Oryzias latipes)
GEO Series GSE17633. Oryzias latipes. 12 samples. Type: Expression profiling by array.
Anchoring ethinylestradiol induced gene expression changes with testicular morphology and reproductive function in the medaka
GEO Series GSE44859. Oryzias latipes. 26 samples. Type: Expression profiling by array.
Medaka larvae were exposed to HBCD
GEO Series GSE49362. Oryzias melastigma; Oryzias latipes. 12 samples. Type: Expression profiling by array.
The effect of post-hatching non-feeding on gene expression in the NIES-R and Hd-rR strains of medaka (Oryzias latipes).
GEO Series GSE279574. Oryzias latipes. 108 samples. Type: Expression profiling by high throughput sequencing.
Modulation of medaka transcriptome by trametinib and cisplatin
GEO Series GSE114190. Oryzias latipes. 60 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiling for control and high temperature treated Japanese medaka
GEO Series GSE144740. Oryzias latipes. 16 samples. Type: Expression profiling by array.
CRISPR-RfxCas13d screening uncovers Bckdk as a post-translational regulator of the maternal-to-zygotic transition in teleosts [RNA Medaka]
GEO Series GSE268290. Oryzias latipes. 8 samples. Type: Expression profiling by high throughput sequencing.
The gene expression of the brain/pituitary from oxt/oxtr1 homozygous mutants and WT medaka in both sexes
GEO Series GSE139158. Oryzias latipes. 18 samples. Type: Expression profiling by high throughput sequencing.
Silver nano-colloids disrupt medaka embryogenesis through vital gene expressions
GEO Series GSE33488. Oryzias latipes. 6 samples. Type: Expression profiling by array.
Identification and expression profiling of microRNAs in brain, liver and gonads of marine medaka (Oryzias melastigma) by Illumina small RNA Sequencing
GEO Series GSE42696. Oryzias melastigma. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Bisulfite sequencing of medaka
GEO Series GSE160114. Oryzias latipes. 6 samples. Type: Methylation profiling by high throughput sequencing.
Transcriptome analysis of the liver of wild-type medaka and phod1 knockout medaka kept under long-day conditions
GEO Series GSE286199. Oryzias latipes. 10 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.