Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
343
datasets available to search
ShareScore release 0.9.0
Dataset results
343 results for “Redox”
Controlled masking and targeted release of redox-cycling ortho-quinones via a C–C bond-cleaving 1,6-elimination
<p>Electronic energies, entropies, enthalpies, Gibbs free energies, and lowest frequencies of the calculated structures (Energies.xlsx).</p> <p>Fitting of kinetic data (Figure_5ci.opju).</p> <p>Gaussian 16 output files for all calculated structures (Gaussian_output_files.zip).</p>
Data from: Oct4 redox sensitivity potentiates reprogramming and differentiation
<p>The transcription factor Oct4/Pou5f1 is a component of the regulatory circuitry governing pluripotency and is widely used to induce pluripotency from somatic cells. Here we use domain swapping and mutagenesis to study Oct4's reprogramming ability, identifying a redox-sensitive DNA binding domain cysteine residue (Cys48) as a key determinant of reprogramming and differentiation. Oct4 Cys48 sensitizes the protein to oxidative inhibition of DNA binding activity and promotes oxidation-mediated protein ubiquitylation. Pou5f1C48S point mutation has little effect on undifferentiated embryonic stem cells (ESCs), but upon retinoic acid (RA) treatment causes retention of Oct4 expression, deregulated gene expression and aberrant differentiation. Pou5f1C48S ESCs also form less differentiated teratomas and contribute poorly to adult somatic tissues. Finally, we describe Pou5f1C48S(Janky) mice, which in the homozygous condition are severely developmentally restricted after E4.5. Rare animals bypassing this restriction appear normal at birth but are sterile. Collectively, these findings uncover a novel Oct4 redox mechanism involved in both entry into and exit from pluripotency.</p>
5420_vOTUs_great-redox-experiment
<p>Final 5,420 viral population list minned from 95 (10 bulk and 85 SIP) metagenomes using VirSorter2 and geNomad.</p>
Metadata - Exploring the Luminescence, Redox, and Magnetic Properties in a Multivariate Metal–Organic Radical Framework
Open the record for dataset details and reuse information.
Structural Basis for Redox Regulation of Cytoplasmic and Chloroplastic Triosephosphate Isomerases from Arabidopsis thaliana
<p>Mass spectrometry raw data files for the determination of the molecular weight of the intact proteins.</p> <p>López-Castillo LM, Jiménez-Sandoval P, Baruch-Torres N, Trasviña-Arenas CH, Díaz-Quezada C, Lara-González S, Winkler R and Brieba LG (2016) Structural Basis for Redox Regulation of Cytoplasmic and Chloroplastic Triosephosphate Isomerases from <em>Arabidopsis thaliana</em>. <em>Front. Plant Sci</em>. 7:1817. doi: 10.3389/fpls.2016.01817</p>
Datasets and Code: Revealing the Role of Redox Reaction Selectivity and Mass Transfer in Current–Voltage Predictions for Ensembles of Photocatalysts
<ul> <li>Raw datasets (.mat and .fig files) and codes (.mlx and .m files) used in our manuscript of the same title. </li> <li>Figure numbers correspond with the figure numbers in the corresponding manuscript. <ul> <li>Figure 4: Effects of kinetic parameters on Solar-to-chemical (STC) efficiencies and reaction selectivity</li> <li>Figure 5: Solar-to-chemical (STC) efficiencies for a model incorporating competing undesired redox reactions implemented for different redox shuttle pairs</li> <li>Figure 7: Solar-to-chemical efficiencies for an ensemble of light absorbers</li> <li>Figure 8: Maximum solar-to-chemical (STC) efficiencies and corresponding number of light absorbers as a function of asymmetry factors in limiting current density for redox shuttle reduction</li> <li>Figure 9: Solar-to-chemical efficiencies for an increasing number of light absorbers for different total absorptance values (99%, 75%, 50%).</li> <li>Figure 10: Qualitative comparisons between experimental measurements and model predictions for a photocatalytic suspension reactor</li> </ul> </li> <li>The main piece of the code developed is provided as an interactive .mlx file; not all subfunction calls within the main code is included, and can be shared upon reasonable request via email from the lead (luisab@umich.edu) and the corresponding authors (rbchan@umich.edu) of this paper. </li> </ul> <p> </p>
Supporting Dataset for "Comparing GGA, GGA+U, and Meta-GGA Functionals for Redox-Dependent Binding at Open Metal Sites in Metal−Organic Frameworks"
<p>Supporting Dataset for "Comparing GGA, GGA+U, and Meta-GGA Functionals for Redox-Dependent Binding at Open Metal Sites in Metal−Organic Frameworks"</p>
Dataset of EPR-monitored-redox potentiometries performed with distinct CrFdx isoforms and variants
<p>The zip-folder contains the raw EPR data and data necessary for construction of the Nernst fits that appear in:</p> <p>Melanie Heghmanns, Alexander Günzel, Dörte Brandis, Yury Kutin, Vera Engelbrecht, Martin Winkler, Thomas Happe, Müge Kasanmascheff, "Fine-tuning of FeS Proteins Monitored via Pulsed EPR Redox Potentiometry at Q-band", Biophysical Reports, 2021, https://doi.org/10.1016/j.bpr.2021.100016.</p> <p>A brief explanation of the files and samples can be found in “Readme.docx”. <br> The relevant data obtained are compiled in “Summary_data.xlsx”. <br> Other experimental details can be found in the paper.</p>
Operando magnetic resonance imaging for mapping of temperature and redox species in thermo-electrochemical cells
<p>Raw data for our publication "Operando magnetic resonance imaging for mapping of temperature and redox species in thermo-electrochemical cells", including imaging files (Paravision), ASCII, MATLAB and EC Lab data files organised corresponding to each figure in the paper and supplementary information.</p>
Role of Counterions in the Structural Stabilisation of Redox-Active Metal-Organic Frameworks
<p>Preliminary dataset for "Role of Counterions in the Structural Stabilisation of Redox-Active Metal-Organic Frameworks"</p>
Targeted Surface Manipulation of Cu/Zn/Ag coatings and Ag/Cu particles based on Sacrificial Element Selection by Electrodeposition and Redox replacement
<p>Dataset Targeted Surface Manipulation of Cu/Zn/Ag coatings and Ag/Cu particles based on Sacrificial Element Selection by Electrodeposition and Redox replacement</p>
Dataset: Addressing Practical Use of Viologen-Derivatives in Redox Flow Batteries through Molecular Engineering
<p>Dataset for the results shown in the publications "Addressing Practical Use of Viologen-Derivatives in Redox Flow Batteries through Molecular Engineering"</p>
Isolation and Redox Reactivity of Cerium Complexes in Four Redox States
<p>This upload contains raw data (NMR, X-Ray, UV, EPR, electrochemistry and Elemental Analysis) files for the article</p>
GDAP1 in vitro redox experiments
<p>SDS-PAGE experiment of recombinantly purified truncated GDAP1 constructs in the presence of reducing agents.</p>
Sample programs of an eco-redox model for the article: Microbial redox cycling enhances ecosystem thermodynamic efficiency and productivity
<p><span>Microbial life in low-energy ecosystems relies on individual energy conservation, optimizing </span><span>energy use in response to interspecific competition, and mutualistic interspecific syntrophy. Our study proposes a novel community-level strategy for increasing energy use efficiency. By</span> <span>utilizing a</span><span>n</span> <span>oxidation-reduction (redox) reaction network model that represents microbial redox metabolic interactions, we </span><span>investigated multiple species-level competition and cooperation within the network</span><span>. Our results suggest that microbial functional diversity allows for metabolic handoffs</span><span>, which in turn lead to increased energy use efficiency. Furthermore, the mutualistic division of labor and the resulting </span><span>complexity of redox pathways actively </span><span>drive material cycling, further promoting energy exploitation. Our findings reveal the potential of self-organized ecological interactions to develop efficient energy utilization strategies, with important implications for microbial ecosystem functioning and </span><span>co-</span><span>evolution of life and Earth.</span></p>
Subsurface redox interactions regulate ebullitive methane flux in heterogeneous Mississippi River deltaic wetland
<p>This dataset is model outputs archive from a model study about 'Subsurface redox interactions regulate ebullitive methane flux in heterogeneous Mississippi River deltaic wetland' (manuscript is Under Review). Plotting scripts are also included in this data file. There are four model results. 'Ebull' model output are ebullition flux, 'Jswi' model output are diffusion flux across soil-water interface, and 'Methane' files are porewater concentration results in each soil layers, and 'LtranR' model outputs for redox species exchange rates across different soil layers. The model source codes can be found at <a href="https://zenodo.org/record/8084441">https://zenodo.org/record/8084441</a> and <a href="https://zenodo.org/record/8087566">https://zenodo.org/record/8087566</a>.</p>
The redox mediated – scanning droplet cell system for evaluation of the solid electrolyte interphase in Li-ion batteries
<p>Dataset of articles "The redox mediated – scanning droplet cell system for evaluation of the solid electrolyte interphase in i-ion batteries"</p>
Dataset for Paul et al., "Revisiting the applicability and constraints of molybdenum and uranium-based paleo redox proxies: comparing two contrasting sill fjords", Biogeosciences, 2023
<p>The datafile contains the solid phase data for Gullmar Fjord (GF-117) and Koljö Fjord (KF-43), presented in Figures 3, 4 and 6 in the publication:</p> <ol> <li>pore water data (SO<sub>4</sub><sup>2-</sup>, ΣH<sub>2</sub>S, Fe, Mn, Mo, and U)</li> <li>solid-phase carbon and nitrogen data (TOC, TN, C/N, OC<sub>terr</sub> and OC<sub>phyt</sub>)</li> <li>solid-phase sequential extraction data (Mo, U, Fe, Mn, Al, Ca, and S)</li> <li>Mo and U-Enrichment Factors (EF)</li> </ol>
Kinetics of the redox reactions in STEAP1 and STEAP2
Open the record for dataset details and reuse information.
Data from: Oct4 redox sensitivity potentiates reprogramming and differentiation
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.