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2,014 results for “Resolvers”
FIGURES 67 – 74. Male genitalia. 67, A in Different continents, same species? Resolving the taxonomy of some Holarctic Ancylis Hübner (Lepidoptera: Tortricidae)
FIGURES 67 – 74. Male genitalia. 67, A. geminana ([no data], TMG 618). 68, A. christiandiana (Austria, TOR 464 P. Huemer). 69, A. diminutana (Germany, TMG 616). 70 – 71, A. diminuatana (70, Maryland, TMG 688; 71, Nebraska, TMG 635). 72, A. saliana (Florida, TMG 676). 73 – 74, A. subarcuana (73, Austria, TMG 619; 74, Germany, TMG 703).
FIGURES 1 – 2. Metochus abbreviatus Scott, 1874 in Resolving the taxonomy and nomenclature of Metochus abbreviatus (Hemiptera: Heteroptera: Rhyparochromidae)
FIGURES 1 – 2. Metochus abbreviatus Scott, 1874. Male from Taiwan: Nantou County, Huisun Experimental Forest Station, 30. iv. 2010, at light, leg. S. W. Hou (NCHU). Fig. 1, dorsal view; Fig. 2, ventral view. Scale in mm.
Data for article: Time-Resolved Spectroscopic Investigation of Charge Trapping in Carbon Nitrides Photocatalysts for Hydrogen Generation
<p>This is the data presented in the article titled 'Time-Resolved Spectroscopic Investigation of Charge Trapping in Carbon Nitrides Photocatalysts for Hydrogen Generation', published in the Journal of the American Chemical Society. DOI:10.1021/jacs.7b01547</p> <p>http://pubs.acs.org/doi/abs/10.1021/jacs.7b01547</p> <p> </p>
Gauging Size Resolved Ambient Particulate Matter Concentration Solely Using Biometric Observations: A Machine Learning and Causal Approach
<p>Notebook and data to accompany the (unpublished) paper titled "Gauging Size Resolved Ambient Particulate Matter Concentration Solely Using Biometric Observations: A Machine Learning and Causal Approach". This work expands a previous study, relating particulate matter concentrations and short-term biometric features across multiple participants. </p><p>Github link: https://github.com/mi3nts/DUEDARE_multiple_participants</p>
Dataset for "Structural complexity and benthic metabolism: resolving the links between carbon cycling and biodiversity in restored seagrass meadows"
<p>This dataset accompanies the article "Structural complexity and benthic metabolism: resolving the links between carbon cycling and biodiversity in restored seagrass meadows" accepted for publication in Biogeosciences (https://doi.org/10.5194/bg-2023-173). The dataset includes benthic fluxes and biodiversity data in from bare sediments, restored <em>Zostera marina</em> and a natural <em>Z. marina</em> meadow collected in Gåsö, Sweden (58.2325, 11.3984) between July 05 - July 20, 2022. </p>
Mediterranean Sea Super Resolved Geostrophic Currents
<p>Super Resolved Geostrophic Surface Currents for the Mediterranean Sea (2008-01-02 to 2019-12-31) computed by means of Convolutional Neural Networks (CNNs) and Generated using E.U. Copernicus Marine Service Information. The generation algorithm is described in Ciani et al. 2024 (https://egusphere.copernicus.org/preprints/2024/egusphere-2024-1164/) and Buongiorno Nardelli et al. 2022. </p> <p>The main directory contains 5 subfolders:</p> <ol> <li>ADT_MFSeas4_Copernicus. Daily data for the year 2017: please refer to Clementi et al. 2019;</li> <li>ADT_MFSeas4_OI_synth_MAP_MED_DT2018_4SAT (Satellite Equivalent Absolute Dynamic Topography, SE-ADT). Daily data for the year 2017: the generation is detailed in Ciani et al. 2021 (section 2.1, item #3);</li> <li>SST_MFSeas4_Copernicus. Daily data for the year 2017: please refer to Clementi et al. 2019;</li> <li>SST_MFSeas4_OI_synth_MAP_MED_HR (Satellite Equivalent Sea Surface Temperature, SE-SST), Daily data for the year 2017: the SE-SSTs merge infromation from SST_MFSeas4_Copernicus with the multi-sensor L3S satellite SSTs for the Mediterranean Area (product ID: SST_MED_SST_L3S_NRT_OBSERVATIONS_010_012). Such L3S SSTs have gaps where infrared SST retrieval is impossible (e.g., due to cloud cover) or where single-sensor satellite SSTs are deemed of poor quality. Choosing the data contained in subfolder #3, a synthetic model-derived L3S SST time series was generated introducing synthetic gaps in the original modelled SSTs. Subsequently, gap-free SSTs, along with an estimate of uncertainty, are generated using standard Optimal Interpolation (OI) via a dedicated algorithm, following methods outlined in Buongiorno Nardelli et al. (2013);</li> <li>dADR-SR_ADT_SST_dtSST_MED: super-resolved geostrophic currents. daily data (2008-01-02 to 2019-12-31). This dataset is generated using E.U. Copernicus Marine Service data of gridded gap-free (Level 4) ADTs and SSTs over the Mediterranean Area and employing a CNN trained by means of the dataset contained in the subfolders 1-4. The CNN architecture/algorithm is described in Ciani et al. (submitted) and Buongiorno Nardelli et al. 2022.</li> </ol> <p>All data are provided in NetCDF format</p>
Clonally resolved spatial transcriptomics data of mouse spleen
<p>The BGI Stereo-seq strategy was applied to a mouse spleen sample containing SPLINTR barcoded AML cells.</p> <p>Data generated with <a href="https://github.com/DaneVass/bartools_manuscript_code/blob/main/spatial-analysis/data_preprocessing_m4_paper.py" target="_blank" rel="noopener">https://github.com/DaneVass/bartools_manuscript_code/blob/main/spatial-analysis/data_preprocessing_m4_paper.py</a>.</p> <p>mouse4_bin*_bc_counts.tsv:<br>Binned barcode counts across whole slide.<br>Can be merged with AnnData file by `cell_id`.<br>Contains all barcodes detected in a bin (`barcode`) and UMI counts summed by bin (`count_binned`).<br>`isin_adata` marks whether the bin is on the manually segmented tissue section.</p> <p>mouse4_bin*_bc_counts_top1.tsv:<br>Binned barcode counts on tissue section, barcode with most UMI per bin is selected. </p> <p>mouse4_bin*_bc.h5ad:<br>Binned stereo-seq data with barcode information.</p> <p>mouse4_bin*_bc_clustered.h5ad:<br>Filtered, log1p transformed, scaled, clustered stereo-seq data.<br>Data is not zero centered for bin10 for memory efficiency.</p>
Code and data for: Are novel or locally adapted pathogens more devastating and why? : resolving opposing hypotheses
<p>The naive host syndrome hypothesis suggests that pathogens are able to easily invade and become deadly to novel hosts because of a lack of co-evolutionary history, whereas the local adaptation hypothesis suggests that pathogens are better able to invade local hosts because of their co-evolutionary history, but rarely do studies on these two hypotheses cite one another or acknowledge their ostensibly mixed messages. By combining a continental-scale, factorial, common garden experiment with a global-scale meta-analysis, each on the amphibian-chytrid fungus host-pathogen system, we show that local host-pathogen interactions typically resulted in higher host mortality, greater infection success, and higher pathogen loads, but that there was substantial variation in novel host-pathogen outcomes and thus moving pathogens around the planet increases the likelihood of exposure to particularly virulent pathogen strains and particularly deadly host-pathogen combination. Therefore, we provide support for both the local adaptation and naïve host syndrome hypotheses, highlight how the two hypotheses are complementary rather than conflicting, and emphasize the need for greater integration of these hypotheses and their associated semi-disparate literature.</p>
Codes and Data for "Vertically resolved analysis of the Madden-Julian Oscillation highlights the role of convective transport of moist static energy"
<p>This file contains the analysis code and a condensed version of data to reproduce figures in the paper "Vertically resolved analysis of the Madden-Julian Oscillation highlights the role of convective transport of moist static energy". </p>
Haplotype-Resolved and Gap-Free Genome of a Floating Aquatic Plant from the Oryzeae Tribe, Hygroryza aristata
<p><em><span>Hygroryza aristata</span></em><span> (Retz.) Nees ex Wight & Arn.</span><span> </span><span>is a floating aquatic plant. <span>Genomic DNA and RNA samples of </span><em><span>H. aristata</span></em><span> were extracted from plants clonally propagated from a single individual. Long-read sequencing of PacBio HiFi and ultra-long (UL) ONT (read lengths > 100 kb), and short-read sequencing of Hi-C, WGS, and RNA-seq, were performed. </span></span></p> <p><span>For genome assembly, 31.91 Gb of PacBio HiFi and 22.36 Gb of UL-ONT sequencing data sets were utilized. Assembly was conducted using HiFiAsm (v0.20.0-r639) under HiFi + UL-ONT mode with the following parameters: -l 3 -r 5 -a 6 -n 10 --ctg-n 10 -w 63 -k 63. Chromosome IDs and strand directions were determined by aligning the assemblies to the rice (</span><em><span>O. sativa</span></em><span>) genome. The resulting assemblies of unphased two haplotypes, designated as hap1 and hap2, were obtained. </span></p> <p><span><span>Both hap1 and hap2 are complete genomes,<span> </span>each comprising 12 chromosomes with genome sizes of 349.74 Mb and 347.98 Mb, respectively. Notably, both haplotypes are gap-free. Telomere detection using Seqtk telo (v1.4-r122) revealed that each haplotype contains 23 telomeres. In conclusion, this study presents a haplotype-resolved and gap-free genome assembly. </span></span></p>
Fig. 3 in A tough nutlet to crack: Resolving the phylogeny of Thesium (Thesiaceae), the largest genus in Santalales
Fig. 3. Photographs of the outgroup (Lacomucinaea) and representatives of the major clades of Thesium. The numbers in the upper right corners correspond to clade numbers on the Bayesian tree (Fig. 2A). Details of flower and/or fruits are shown in the insets. A, Lacomucinaea clade, L. lineata; B, Kunkeliella clade, T. subsucculentum; C, Thesidium clade, T. fragile; D, Mauritanica clade, T. mauritanicum; E, Humilia clade, T. humile; F, Macranthia clade, T. szowitsii; G, Eurasian clade, T. minkwitzianum; H, Procumbens clade, T. brachyphyllum; I, Parnassi clade, T. parnassi; J, Bavarum clade, T. bavarum; K, Alpina clade, T. alpinum; L, Linophylla clade, T. humifusum; M, Second Asian Radiation, T. catalaunicum; N, Rostratum clade, T. rostratum; O, Multicaule clade, T. ebracteatum; P, Australe clade, T. chinense; Q, Longifolia clade, T. refractum; R, Ramosum clade, T. ramosum; S, Himalensia clade, T. himalense; T, Alatavicum clade, T. alatavicum. — For photo credits, see suppl. Appendix S3.
Fig. 5 in A tough nutlet to crack: Resolving the phylogeny of Thesium (Thesiaceae), the largest genus in Santalales
Fig. 5. Photographs of representatives of the major clades of Thesium species. The numbers in the upper right corners correspond to clade numbers on the Bayesian tree (Fig. 2C,D). L.S. = longitudinal section. A, Ussanguense clade, T. passerinoides, herbarium specimen (Christiaensen 2495, BR) with rehydrated flowers and fruits; B, Stuhlmannii clade, T. fimbriatum, herbarium specimen (Goldblatt 8056, MO) with rehydrated flowers and fruits; C, Austroamericium clade, T. aphyllum, habit and flowers; D, Tenuissimum clade, T. tenuissimum, herbarium specimen (Meijer 15407, BR) with rehydrated flowers; E, Reekmansii clade, T. madagascariense, herbarium specimen (Evrard 11284, BR) with rehydrated flower; F, Reekmansii clade, T. wilczekianum Lawalrée, herbarium specimen (Milne-Redhead 3581, BR), dissected flower from rehydrated herbarium specimen (Malaisse 8407, BR). Asterisk denotes calyx lobe; G, Filipes clade, T. filipes, flowering shoot, flowers, fruit. Asterisks denote calyx lobes; H, Amicorum clade, T. amicorum, herbarium specimen and rehydrated flowers (Lisowski & al. 5736, BR); I, Viride clade, T. equisetoides, flower shoots and flower developmental series; J, Viride clade, T. fastigiatum, habit and flowers; K, Angulosum clade, T. angulosum, shoot with floral buds, flowers, fruit L.S.; L, Cupressoides clade, T. cupressoides, habit, flowers, young fruits; M, LDD2 clade, T. radicans, habit, fruits; N, LDD2 clade, T. psilotoides, herbarium specimen and rehydrated flowers and fruits (Williams 1310, NY); O, LDD2 clade, T. decaryanum, flowering shoot and closer view of flowers; P, Pallidum clade, T. pallidum, flowering shoots, flowers, fruit; Q, Cornigerum clade, T. cornigerum, shoot with flowers and young fruits, close-up of same; R, Kilimandscharicum clade, T. dolichomeras, habit, flowers, fruits; S, Resedoides clade, T. resedoides, habit, flower, young fruits; T, Gracile clade, T. gracile, habit, flowers, fruit. — For photo credits, see suppl. Appendix S3.
Fig. 4 in A tough nutlet to crack: Resolving the phylogeny of Thesium (Thesiaceae), the largest genus in Santalales
Fig. 4. Photographs of representatives of the major clades of mostly South African Thesium species. The numbers in the upper right corners correspond to clade numbers on the Bayesian tree (Fig. 2B,C). L.S = longitudinal section. A, African clade, T. nautimontanum, rehydrated herbarium specimens showing flower and young fruits (ˇSibík & ˇSibíková MS463, MA); B, Spinosum clade, T. spinulosum, shoot with flowers and fruits, flower and L.S., fruit L.S.; C, Namaquense clade, T. lacinulatum, habit, flower and fruits; D, Triflorum clade, T. scandens, flowering shoots, flowers, and fruit L.S.; E, Triflorum clade, T. triflorum; F, Core Cape clade, T. euphorbioides, flowering shoots, flowers, and fruit L.S.; G, Foliosum clade, T. foliosum, flowering shoots, flower L.S., and fruit L.S.; H, Ericaefolium clade, T. ericaefolium, flowering shoots, flowers, and fruits; I, Scirpioides clade, T. flexuosum, flowering shoots, flower L.S., and fruit L.S.; J, Strictum clade, T. albomontanum, habit, flower L.S., and fruits; K, Capitatum clade, T. carinatum, shoots with young fruits, flower L.S., and fruit L.S.; L, Annulata clade, T. funale, shoots with flowers and young fruits, flower L.S., and fruit L.S; M, Nigromontanum clade, T. nigromontanum, shoots with flowers and young fruits, flower L.S., and fruit L.S.; N, Virgatum clade, T. pseudovirgatum, habit, flower L.S., and fruit L.S.; O, Capitellatum clade, T. prostratum, flowering shoots, flower L.S., and fruit L.S.; P, Acuminatum clade, T. capituliflorum, flowering shoots, flower L.S., and fruit L.S.; Q, Hispidulum clade, T. hispidulum, flowering shoots, flower L.S., and fruit L.S.; R, Commutatum clade, T. commutatum, shoots with flowers and young fruits, flower L.S., and fruit L.S.; S, Gnidiaceum clade, T. gnidiaceum (left); T. impeditum (right), inflorescences; T, Gnidiaceum clade, T. oresigenum (left) showing pendant habit and flowers; T. phyllostachyum (right) inflorescence and flower close-up. — For photo credits, see suppl. Appendix S3.
Resolving Pleiades Binary Stars with Gaia and Speckle Interferometric Observations
<p>These supplementary data accompany the paper "Resolving Pleiades Binary Stars with Gaia and Speckle Interferometric Observations", <a href="https://iopscience.iop.org/article/10.3847/1538-3881/ada564" target="_blank" rel="noopener">published by the Astronomical Journal</a>. Table data are also available through the <a href="https://vizier.cds.unistra.fr/viz-bin/VizieR?-source=J/AJ/169/145" target="_blank" rel="noopener">VizieR service</a>. <br><a href="https://ui.adsabs.harvard.edu/abs/2025AJ....169..145C/abstract" target="_blank" rel="noopener">ADS: 2025AJ....169..145C</a>, <a href="https://arxiv.org/abs/2412.20986" target="_blank" rel="noopener">arXiv: 2412.20986</a></p> <p>Observations were obtained with the Speckle Polarimeter (SPP) instrument of the 2.5-m telescope of the Caucasian Observatory of the SAI MSU.</p> <p>Full versions of Table 5 and Table 6, containing binarity information and detection limits, are stored in "table5.mrt" and "table6.mrt". Contrast curves and autocorrelation functions for all observed objects are stored in "acfs/" folder inside "SPP_contrastCurves_ACFs_Pleiades.zip". These plots can be accessed directly with filename search by Gaia DR3 source identifier. The csv-table "contrastCurves_ACFs_filenames_info.csv" contains additional information about observations - date of observation, passband, seeing, comments etc. We provide a small Jupyter notebook script "display_contrastCurves_ACFs.ipynb" to display available observations along with fragments of Table 5 and Table 6 for specified object.</p>
APPENDIX V in Integrative approach to resolve the Calotes mystaceus Duméril & Bibron, 1837 species complex (Squamata: Agamidae)
APPENDIX V. Boxplots of selected characters of examined specimens of the different described species. A. Males. B. Females.
Fig. 10 in Integrative approach to resolve the Calotes mystaceus Duméril & Bibron, 1837 species complex (Squamata: Agamidae)
Fig. 10. Overview of the distinct taxa of the Calotes mystaceus complex. A. Calotes mystaceus, male from Mingalardon Township, Hlawga Wildlife Park, Yangon Divison, Myanmar (CAS 213300). B. Calotes mystaceus, female from Yangon, Myanmar. C. Calotes bachae, holotype from Cat Tien National Park, Vietnam (ZFMK 92028). D. Calotes bachae, female paratype from Cat Tien National Park, Vietnam (ZFMK 88936, now IEBR A.2012.23). E. Calotes geissleri sp. n., male from Chin, Myanmar (CAS 220586). F. Calotes geissleri sp. n., female from Magwe, Myanmar (CAS 221593). G. Calotes goetzi sp. n., male from the type locality Kbal Spean, Cambodia (ZFMK 92606). H. Calotes goetzi sp. n., female from the type locality Kbal Spean, Cambodia (ZFMK 92607). I. Calotes vindumbarbatus sp. n., male from Kachin, Myanmar (CAS 232819). J. Calotes vindumbarbatus sp. n., male from Kachin, Myanmar (CAS 232819).
Fig. 8 in Integrative approach to resolve the Calotes mystaceus Duméril & Bibron, 1837 species complex (Squamata: Agamidae)
Fig. 8. Calotes mystaceus Duméril & Bibron, 1837. A. Holotype (MNHN 2557, juvenile male), general view from above. B. Holotype, detailed lateral view. C. Adult male from Yangon, eastern Irrawaddydelta, coastal Myanmar, which is within the type locality "pays de Birmans [=Myanmar]."
Fig. 9 in Integrative approach to resolve the Calotes mystaceus Duméril & Bibron, 1837 species complex (Squamata: Agamidae)
Fig. 9. Calotes vindumbarbatus sp. n. A. Holotype (CAS 232388, adult male) from Myanmar, Kachin State, Gat Shang Yang Village, general view from above. B. Holotype, lateral view. C. Living adult male (CAS 232819) from Myanmar, Kachin State, Mohnyin Township, Hepu village [25.094528° N, 96.401833° E, alt. 243 m.].
Fig. 4 in Integrative approach to resolve the Calotes mystaceus Duméril & Bibron, 1837 species complex (Squamata: Agamidae)
Fig. 4. Principal component analysis results for the morphologically examined specimens, colored according to to the genetic clades. Details of Eigenvalues and explained variance are given in Table 3.
Fig. 6 in Integrative approach to resolve the Calotes mystaceus Duméril & Bibron, 1837 species complex (Squamata: Agamidae)
Fig. 6. Calotes geissleri sp. n. A. Holotype (CAS 215539, adult male), general view from above. B. Holotype, lateral view. C. Living adult male (CAS 220586), from Nat Ma Taung National Park, Htin Chaun Village, Chin State, Myanmar.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.