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152
datasets available to search
ShareScore release 0.9.0
Dataset results
152 results for “Single-cell multiome”
Novel Single-Cell Multiomics Approach to Analyze Replication Timing and Gene Expression in Mouse Preimplantation Embryos
GEO Series GSE284010. Mus musculus. 248 samples. Type: Expression profiling by high throughput sequencing; Other.
Investigate FOXA2 driven lineage plasticity in prostate cancer cells by single-cell Multiome ATAC + Gene Expression assay.
GEO Series GSE239276. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multiomics of the human retina reveals hierarchical transcription factor collaboration in mediating cell type-specific effects of genetic variants on gene regulation
GEO Series GSE247157. Homo sapiens. 41 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Multiomic single-cell sequencing of skin and blister fluid from patients with severe cutaneous adverse drug reactions.
GEO Series GSE275871. Homo sapiens. 92 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multiome of the human retina and deep learning nominate causal variants in complex eye diseases
GEO Series GSE196235. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
BCL11B enhancer hijacking defines a subtype of lineage ambiguous stem cell leukemia [single-cell multiomics]
GEO Series GSE173319. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Multiomic Atlas of Human Cortical Development in Down Syndrome - Neural Progenitors in vitro - Treatment with Antisense Oligonucleotides for PKNOX1, BACH1 and GABPA (Bulk RNA-seq Dataset)
GEO Series GSE305132. Homo sapiens. 68 samples. Type: Expression profiling by high throughput sequencing.
Chromatin and gene-regulatory dynamics of mouse nephron progenitors at single-cell resolution [Single cell Multiome ATAC + Gene Expression]
GEO Series GSE180900. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell Multiomics Analysis Reveals CTCF as a Key Regulator of Lung Morphogenesis and Progenitor Maintenance
GEO Series GSE286984. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics analysis identifies metabolism-linked epigenetic reprogramming as a driver of therapy-resistant medulloblastoma [PDX Multiome]
GEO Series GSE283606. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A single-cell multiomics atlas of rice
GEO Series GSE245410. Oryza sativa. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Multiomics Profiling Reveals Heterogeneity of Müller Cells in the Oxygen-Induced Retinopathy Model
GEO Series GSE283276. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Functional phenotyping of genomic variants using joint multiomic single-cell DNA-RNA sequencing
GEO Series GSE268646. Homo sapiens; Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell Multiomics Analysis Reveals CTCF as a Key Regulator of Lung Morphogenesis and Progenitor Maintenance
GEO Series GSE286986. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multiome sequencing of human kidney anatomical regions with SHARE-seq
GEO Series GSE234788. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single-cell 3D Genome and Multiome of the Human and Mouse Cerebellum
GEO Series GSE246785. Homo sapiens; Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
SCENIC+: identification of enhancers and gene regulatory networks using single-cell multiomics (Cortex)
GEO Series GSE210747. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multiomics reveals stage of differentiation and trajectory-dependent immunity-related gene expression patterns in human erythroid cells
GEO Series GSE261733. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell multiome profiling reveals pancreas cell type-specific gene regulatory programs of type 1 diabetes progression [snRNA-seq]
GEO Series GSE273597. Homo sapiens. 33 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multiomic analysis identifies macrophage subpopulations in promoting cardiac repair
GEO Series GSE235275. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.