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3,273 results for “alternation”
Training and Testing Data, Associated Code, and WRF Code for ML-based nonhydrostatic alternative scheme in dynamical core of atmosphere
<p>Data and codes for a nonhydrostatic alternative scheme (NAS) in dynamical core of atmosphere based on machine learning.</p> <p>In this new version, the randomly sampled training data samples testing data samples from nonhydrostatic simulations in WRF baraclinic wave test are provided. They are processed into a new data structure, which can be directly utilized in training and testing. </p> <p>Follow the instructions in README.txt and download the training and testing data, and the associated codes.</p> <p>Here we provide 3 parts of data and codes:</p> <p>1, Training and testing data from WRF;</p> <p>2, Training and testing codes for two machine learning emulators: machine learning and neural network</p> <p>3, WRF application.</p>
Fig. 5 in The Alternative Distribution Of Related Earthworms Aporrectodea Caliginosa And A. Trapezoides (Oligochaeta, Lumbricidae) In Ukraine As A Case Of Geographical Parthenogenesis
Fig. 5. Changes in the proportion of A. trapezoides in A. caliginosa s. l. sample sets depending on geographical longitude.
Fig. 3. A. caliginosa–A in The Alternative Distribution Of Related Earthworms Aporrectodea Caliginosa And A. Trapezoides (Oligochaeta, Lumbricidae) In Ukraine As A Case Of Geographical Parthenogenesis
Fig. 3. A. caliginosa–A. trapezoides specimens ratio in A. caliginosa s. l. sample sets. Black filling — A. caliginosa, cross-hatching — A. trapezoids.
Brood parasites that care: alternative nesting tactics in a subsocial wasp
<div> <p>Hosts and brood parasites are a classic example of conflict. Parasites typically provide no offspring care after laying eggs, imposing costs on hosts. Female subsocial wasps, <em>Ammophila pubescens</em>, alternated between initiating their own nests and an 'intruder' tactic of replacing eggs in nests of unrelated conspecifics. Hosts could respond by substituting new eggs of their own, with up to eight reciprocal replacements. Remarkably, intruders usually provisioned offspring in host nests, often alongside hosts. We used field data to investigate why intruders provision and to understand the basis of interactions. We found that intruders could not increase their fitness payoffs by using the typical brood parasite tactic of not provisioning offspring. Intruders using the typical tactic would benefit when hosts provisioned in their stead, but their offspring would starve when hosts failed to provision. Although some hosts obtained positive payoffs when intruders mistakenly provisioned their offspring, on average utilizing a conspecific nest represents parasitism: hosts pay costs while intruders benefit. Both females used the same tactic of egg replacement, but intruders more often laid the final egg. Selection should favour better discrimination of offspring, which could lead to repeated cycles of costly egg replacement.</p> </div>
Ooh Na Na Alternative Identifiers
<p>A dump of the alternative identifiers extracted from the OBO Foundry as a three column TSV - prefixes, primary identifiers, and alt identifiers.</p> <p>Generated with the following code:</p> <pre><code class="language-bash">pip install pyobo pyobo database alts</code></pre> <p> </p>
Data Instances for: Who moves the locker? A benchmark study of alternative mobile parcel locker concepts
<p>|C|_h.txt</p> <p>|C|: number of customers<br> h: instance</p> <p>|C|;|P|;</p> <p>|C|: number of customers<br> |P|: number of parking spaces</p> <p>Customer (c;size;max_dist;min_time;L;x_1;y_1;...;x_L;y_L;s_1;e_1;...;s_L;e_L)</p> <p>c: customer index <br> size: parcel size<br> max_dist: maximum walking distance<br> min_time: minimum overlap time<br> L: number of whereabouts<br> (x_i,y_i): position of whereabouts i<br> [s_i,e_i]: time window of whereabouts i</p> <p>Parking space (p;x;y)<br> p: parking space index <br> (x,y): position</p>
Alternative Covid-19 mitigation measures in school classrooms: Analysis using an agent-based model of SARS-CoV-2 transmission
<p>The SARS-CoV-2 epidemic continues to have major impacts on children's education, with schools required to implement infection control measures that have led to long periods of absence and classroom closures. We have developed an agent-based epidemiological model of SARS-CoV-2 transmission that allows us to quantify projected infection patterns within primary school classrooms, and related uncertainties; the basis of our approach is a contact model constructed using random networks, informed by structured expert judgment. The effectiveness of mitigation strategies is considered in terms of effectiveness at suppressing infection outbreaks and limiting pupil absence. Covid-19 infections in schools in the UK in Autumn 2020 are re-examined and the model used for forecasting infection levels in autumn 2021, as the more infectious Delta-variant was emerging and school transmission was thought likely to play a major role in an incipient new wave of the epidemic. Our results are in good agreement with available data and indicate that testing-based surveillance of infections in the classroom population with isolation of positive cases is a more effective mitigation measure than bubble quarantine both for reducing transmission in primary schools and for avoiding pupil absence, even accounting for the insensitivity of self-administered tests. Bubble quarantine entails large numbers of pupils being absent from school, with only a modest impact on classroom infection levels. However, maintaining a reduced contact rate within the classroom can have a major beneficial impact on managing Covid-19 in school settings.</p>
Dataset: Alternative electron donors for the nitrogenase-like dark-operative protochlorophyllide oxidoreductase (DPOR)
<p>Dataset for publication: <a href="https://doi.org/10.1002/celc.202200774">https://doi.org/10.1002/celc.202200774</a> </p> <p>Includes:</p> <p>- The values used to create all of the figures in the manuscript and in the supporting information</p> <p>- The raw data and the corrected data for all activity assays (including repeats)</p> <p>- The raw data (absorbance spectra) obtained from the real-time experiments (DT, MV and TQ-spectroelectrochemistry). The .zip files contain a file named "index", which explains the naming/numbering of the .txt.files (absorbance spectra), and how the values are processed.</p> <p>- The sequences and sequencing data for plasmids pHAL1 and pHANB1</p>
Data for manuscript "rMATS-turbo: an efficient and flexible computational tool for alternative splicing analysis of large-scale RNA-seq data"
<p>Output files generated by rMATS-turbo for the two example datasets described in the manuscript titled "rMATS-turbo: an efficient and flexible computational tool for alternative splicing analysis of large-scale RNA-seq data".</p> <table> <tbody> <tr> <td>File</td> <td>Description</td> <td>Cell lines</td> <td>BioProject</td> </tr> <tr> <td>PC3E-GS689.tar.gz</td> <td>Compressed folder containing all 36 rMATS-turbo output files for Example 1 described in the manuscript</td> <td>PC3E and GS689 cell lines</td> <td>PRJNA438990</td> </tr> <tr> <td>CCLE.tar.gz</td> <td>Compressed folder containing all 36 rMATS-turbo output files for Example 2 described in the manuscript</td> <td>1,019 CCLE human cancer cell lines</td> <td>PRJNA523380</td> </tr> </tbody> </table> <p>A detailed description of the output files is available in the manuscript and the rMATS-turbo software GitHub repository (https://github.com/Xinglab/rmats-turbo).</p>
Alternatively_coded_phage_proteomics
<p>Genomes for 2 alternatively coded phages in our proteomics study, and a .tsv with accession numbers for associated datasets. </p>
Alternative splicing and genetic variation of MHC-E: Implications for rhesus cytomegalovirus-based vaccines
<p>We used long-read sequencing to interrogate rhesus macaque (RM) MHC-E (Mamu-E) alternative splicing and genetic variations. Full-length Mamu-E RNA isoforms were recovered using the PacBio Iso-Seq method. Incomplete 5' ends of Mamu-E isoforms were confirmed using Sanger sequencing, where we identified three additional isoforms. Full-length human MHC-E (HLA-E) isoforms were also recovered using the PacBio Iso-Seq method. Isoform sequences and annotations are provided for both Mamu-E and HLA-E in addition to Mamu-E Sanger sequencing data. HLA-E annotations are reported using the hg38 reference, while Mamu-E annotations are shown using rhesus MHC Class I and II assemblies previously generated using Bacterial Artificial Cloning (BAC) technology (https://www.ncbi.nlm.nih.gov/nuccore/AC148696.1).</p> <p>Using PacBio Long Amplicon Analysis, we sequenced complete Mamu-E coding regions of 59 RMs and additionally captured 3' UTR polymorphism using mRNA-seq haplotype phasing analysis. The complete genotyping data for these animals are provided as well as animal metadata. Genotyping data is shown using the Mamu-E canonical isoform (Mamu-E1 from Iso-Seq analysis) as reference.</p>
Text-fig. 11. Acer Post Hammer species 1, UF 279-34456. a, b: Diffuse-porous wood with distinct growth rings, marked by marginal parenchyma, vessels solitary and in short radial multiples, TS. c: Crowded alternate intervessel pits, TLS. d: Simple perforation plates, helical thickenings in vessel elements, TLS. e: Rays 2–3-seriate, gum deposit in vessel element, TLS. Acer Post Hammer species 2. UF 279-34466. f: Diffuse-porous wood with distinct growth rings, marked by marginal parenchyma, vessels solitary and in short radial multiples, TS. g: Alternate intervessel pits, helical thickenings in vessel elements, TLS. h: Rays 1–4(–5)-seriate, TLS. i: Crystalliferous strand, multiseriate ray, TLS. Trochodendron beckii, UF 279-24558. j, k: Distinct growth rings, abrupt transition from earlywood to latewood, vesselless, wide rays noded at growth ring boundaries, TS. l: Rays of two distinct sizes, uniseriate and multiseriates>10-seriate, TLS. m. Scalariform intertracheary pits. RLS. Scale bars: 500 µm in j; 200 µm in a, f, k, l; 100 µm in b, h; 50 µm in c, d, e, g, i, m. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 11. Acer Post Hammer species 1, UF 279-34456. a, b: Diffuse-porous wood with distinct growth rings, marked by marginal parenchyma, vessels solitary and in short radial multiples, TS. c: Crowded alternate intervessel pits, TLS. d: Simple perforation plates, helical thickenings in vessel elements, TLS. e: Rays 2–3-seriate, gum deposit in vessel element, TLS. Acer Post Hammer species 2. UF 279-34466. f: Diffuse-porous wood with distinct growth rings, marked by marginal parenchyma, vessels solitary and in short radial multiples, TS. g: Alternate intervessel pits, helical thickenings in vessel elements, TLS. h: Rays 1–4(–5)-seriate, TLS. i: Crystalliferous strand, multiseriate ray, TLS. Trochodendron beckii, UF 279-24558. j, k: Distinct growth rings, abrupt transition from earlywood to latewood, vesselless, wide rays noded at growth ring boundaries, TS. l: Rays of two distinct sizes, uniseriate and multiseriates>10-seriate, TLS. m. Scalariform intertracheary pits. RLS. Scale bars: 500 µm in j; 200 µm in a, f, k, l; 100 µm in b, h; 50 µm in c, d, e, g, i, m.
Text-fig. 9. Wataria kvacekii sp. nov., UF 279-24556. a: Wood ring-porous, earlywood with 2–3 rows of wide pores, vessels solitary and in radial multiples of 2, axial parenchyma scanty vasicentric and some apotracheal diffuse-in-aggregates, TS. b: Series of vessel elements with simple perforations, axial parenchyma strands adjacent to vessels, RLS. c: Alternate intervessel pitting, vessel element end walls horizontal, RLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e, f: Rays with tile cells, storied axial parenchyma, some strands chambered crystalliferous, TLS. g: Detail of ray, TLS. h: Storied imperforate elements. Scale bars: 200 µm in a; 100 µm in b, e; 50 µm in c, d, f, h; 20 µm in g. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 9. Wataria kvacekii sp. nov., UF 279-24556. a: Wood ring-porous, earlywood with 2–3 rows of wide pores, vessels solitary and in radial multiples of 2, axial parenchyma scanty vasicentric and some apotracheal diffuse-in-aggregates, TS. b: Series of vessel elements with simple perforations, axial parenchyma strands adjacent to vessels, RLS. c: Alternate intervessel pitting, vessel element end walls horizontal, RLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e, f: Rays with tile cells, storied axial parenchyma, some strands chambered crystalliferous, TLS. g: Detail of ray, TLS. h: Storied imperforate elements. Scale bars: 200 µm in a; 100 µm in b, e; 50 µm in c, d, f, h; 20 µm in g.
Text-fig. 8. Pterocaryoxylon sp., a–c, e: UF 279-85024; d, f: UF 279-24551. a, b: Wood semi-ring-porous, vessels solitary and in short radial multiples, axial parenchyma scanty vasicentric, marginal, and in narrow lines, TS. c: Crowded alternate intervessel pitting, simple perforation plate (PP), TLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e: Rays mostly 1–3 cells wide, occasionally 4 cells, uniseriate rays probably mostly square to upright cells, TLS. f: Rays heterocellular, body cells procumbent. Scale bars: 200 µm in a, b; 100 µm in e, f; 50 µm in c; 20 µm in d. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 8. Pterocaryoxylon sp., a–c, e: UF 279-85024; d, f: UF 279-24551. a, b: Wood semi-ring-porous, vessels solitary and in short radial multiples, axial parenchyma scanty vasicentric, marginal, and in narrow lines, TS. c: Crowded alternate intervessel pitting, simple perforation plate (PP), TLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e: Rays mostly 1–3 cells wide, occasionally 4 cells, uniseriate rays probably mostly square to upright cells, TLS. f: Rays heterocellular, body cells procumbent. Scale bars: 200 µm in a, b; 100 µm in e, f; 50 µm in c; 20 µm in d.
Text-fig. 1. Pistacia terrazasae sp. nov., a: UF 279-85025; b–i: UF 279-24545. a: Ring-porous wood with widely spaced solitary earlywood vessels; latewood vessels in radial multiples of 4 or more and in clusters, TS. b: Growth ring boundary, fiber walls thin to thick, TS. c: Simple perforation plates, alternate intervessel pits, helical thickenings in vessels, TLS. d: Multiseriate rays to 4-seriate, tyloses in vessels, helical thickenings throughout body of vessel element, and alternate intervessel pitting, TLS. e: Vessel-ray parenchyma pitting with reduced borders, oval in outline, RLS. f: Marginal row of upright cells, one inflated and crystalliferous, procumbent body cells, RLS. g: Multiseriate rays mostly 3-seriate, occasionally 4-seriate, uniseriate rays usually <10 cells tall, TLS. h: Ray with enlarged crystalliferous marginal cell, to left of C, TLS. i: Ray with canal, TLS. Scale bars: 200 µm in a, g; 100 µm in b, d, h; 50 µm in c, i; 20 µm in e, f. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 1. Pistacia terrazasae sp. nov., a: UF 279-85025; b–i: UF 279-24545. a: Ring-porous wood with widely spaced solitary earlywood vessels; latewood vessels in radial multiples of 4 or more and in clusters, TS. b: Growth ring boundary, fiber walls thin to thick, TS. c: Simple perforation plates, alternate intervessel pits, helical thickenings in vessels, TLS. d: Multiseriate rays to 4-seriate, tyloses in vessels, helical thickenings throughout body of vessel element, and alternate intervessel pitting, TLS. e: Vessel-ray parenchyma pitting with reduced borders, oval in outline, RLS. f: Marginal row of upright cells, one inflated and crystalliferous, procumbent body cells, RLS. g: Multiseriate rays mostly 3-seriate, occasionally 4-seriate, uniseriate rays usually <10 cells tall, TLS. h: Ray with enlarged crystalliferous marginal cell, to left of C, TLS. i: Ray with canal, TLS. Scale bars: 200 µm in a, g; 100 µm in b, d, h; 50 µm in c, i; 20 µm in e, f.
Text-fig. 2. Celtis popsii sp. nov., UF 279-34460. a: Growth ring with earlywood of multiple rows of vessels solitary and in radial multiples; latewood vessels in wavy tangential bands, TS. b: Growth ring boundary, latewood vessels in multiples with axial parenchyma confluent, TS. c: Simple perforation plates, alternate intervessel pits, polygonal in outline, TLS. d: Vessel-ray parenchyma pits to right of VRP, oval in outline, with slightly reduced borders, RLS. e: Rays tending to two sizes, some multiseriate rays with distinct sheath cells, multiseriate rays usually with 1 marginal row of square to upright cells, occasionally with 4 or more; uniseriate rays less than 10 cells high, TLS. f: Detail of multiseriate ray with distinct sheath cells, vessel element end walls, TLS. Scale bars: 200 µm in a, e; 100 µm in b; 50 µm in c, f; 20 µm in d. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 2. Celtis popsii sp. nov., UF 279-34460. a: Growth ring with earlywood of multiple rows of vessels solitary and in radial multiples; latewood vessels in wavy tangential bands, TS. b: Growth ring boundary, latewood vessels in multiples with axial parenchyma confluent, TS. c: Simple perforation plates, alternate intervessel pits, polygonal in outline, TLS. d: Vessel-ray parenchyma pits to right of VRP, oval in outline, with slightly reduced borders, RLS. e: Rays tending to two sizes, some multiseriate rays with distinct sheath cells, multiseriate rays usually with 1 marginal row of square to upright cells, occasionally with 4 or more; uniseriate rays less than 10 cells high, TLS. f: Detail of multiseriate ray with distinct sheath cells, vessel element end walls, TLS. Scale bars: 200 µm in a, e; 100 µm in b; 50 µm in c, f; 20 µm in d.
Text-fig. 3. Cercidiphyllum cf. alalongum R.A.SCOTT et E.A.WHEELER, UF 279-24543. a, b: Diffuse-porous wood, exclusively solitary vessels, axial parenchyma rare, thick-walled fibers, TS. c: Scalariform perforation plate with more than 30 bars, RLS. d: Helical thickenings (HT) in vessel element tip, RLS. e: Opposite to scalariform intervessel pits, RLS. f, g: Heterocellular rays 1–2 cells wide, occasionally uniseriate and biseriate portions of similar width, TLS. h: Ray with alternating rows of procumbent and upright (-square) cells, RLS. Scale bars: 200 µm in a; 100 µm in b, f; 50 µm in c, g, h; 20 µm in d, e. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 3. Cercidiphyllum cf. alalongum R.A.SCOTT et E.A.WHEELER, UF 279-24543. a, b: Diffuse-porous wood, exclusively solitary vessels, axial parenchyma rare, thick-walled fibers, TS. c: Scalariform perforation plate with more than 30 bars, RLS. d: Helical thickenings (HT) in vessel element tip, RLS. e: Opposite to scalariform intervessel pits, RLS. f, g: Heterocellular rays 1–2 cells wide, occasionally uniseriate and biseriate portions of similar width, TLS. h: Ray with alternating rows of procumbent and upright (-square) cells, RLS. Scale bars: 200 µm in a; 100 µm in b, f; 50 µm in c, g, h; 20 µm in d, e.
Text-fig. 16. Photomicrographs of thin sections of specimen BP/16/1734, Terminalioxylon mozambicense sp. nov. from Mhengere Hill, Gorongosa, Mozambique. a: TS with round vessels, scanty paratracheal to vasicentric parenchyma, diffuse and narrow terminal or initial bands; b: TS at higher magnification, note the very narrow rays; c: TLS, vessels with small alternate pits, and partly tylosed; d–g: TLS with crystals (small white arrows) in the parenchyma cells, medium to thick-walled fibres and uniseriate, low rays; h: TLS, rays up to 20 cells high; i: RLS rays with procumbent body cells and 1–2 rows of marginal upright cells. in Stratigraphy, Chronology And Palaeontology Of The Tertiary Rocks Of The Cheringoma Plateau, Mozambique
Text-fig. 16. Photomicrographs of thin sections of specimen BP/16/1734, Terminalioxylon mozambicense sp. nov. from Mhengere Hill, Gorongosa, Mozambique. a: TS with round vessels, scanty paratracheal to vasicentric parenchyma, diffuse and narrow terminal or initial bands; b: TS at higher magnification, note the very narrow rays; c: TLS, vessels with small alternate pits, and partly tylosed; d–g: TLS with crystals (small white arrows) in the parenchyma cells, medium to thick-walled fibres and uniseriate, low rays; h: TLS, rays up to 20 cells high; i: RLS rays with procumbent body cells and 1–2 rows of marginal upright cells.
Text-fig. 15. Photomicrographs of thin sections of holotype BP/16/1738, Sorindeioxylon gorongosense gen. et sp. nov. from Muaredzi site 5, Gorongosa, Mozambique. a: TS, note the irregularly spaced and very narrow bands of parenchyma and mostly solitary vessel elements; b: TS at higher magnification with narrow rays; c: radial longitudinal section (RLS), rather oblique but shows the alternate, small-to-medium inter-vessel pits; d: tangential longitudinal section (TLS), rays are 1–3 cells wide but maintain the same width. Small arrow towards the right hand ray indicates a prismatic crystal in the ray cell; e: TLS rays with fibres in between; f: RLS showing mixed ray cells (upright, square and procumbent) poorly preserved. in Stratigraphy, Chronology And Palaeontology Of The Tertiary Rocks Of The Cheringoma Plateau, Mozambique
Text-fig. 15. Photomicrographs of thin sections of holotype BP/16/1738, Sorindeioxylon gorongosense gen. et sp. nov. from Muaredzi site 5, Gorongosa, Mozambique. a: TS, note the irregularly spaced and very narrow bands of parenchyma and mostly solitary vessel elements; b: TS at higher magnification with narrow rays; c: radial longitudinal section (RLS), rather oblique but shows the alternate, small-to-medium inter-vessel pits; d: tangential longitudinal section (TLS), rays are 1–3 cells wide but maintain the same width. Small arrow towards the right hand ray indicates a prismatic crystal in the ray cell; e: TLS rays with fibres in between; f: RLS showing mixed ray cells (upright, square and procumbent) poorly preserved.
Text-fig. 14. Photomicrographs of thin sections of specimen BP/16/1732 Palmoxylon dutoitii from Mhengere Hill, Gorongosa, Mozambique. a: transverse section (TS) with four fibre vascular bundles (fvb) and poorly preserved parenchyma between; b: diagram of one of the fvbs in (a) of the reniform type (f – fibres, mx – metaxylum, p – phloem, px – protoxylum); c: close up of the vascular part of a fvb with 2 metaxylem elements and the collapsed cells to the lower left represents the phloem; d: fvb with 2 metaxylem elements, fibrous part to the left and parencymarous ground tissue to the right; e: lower magnification of fvb in (c); f: fvb with three metaxylem elements and phloem patch below; g: longitudinal section (LS) showing the vascular sections alternating with the fibrous sections; h: LS showing the horizontal thickening on the walls of the metaxylem vessels and a patch of parenchyma to the right (darker cells); i: spheroid echinate phytoliths that are typical of Hyphaene and Borassus. in Stratigraphy, Chronology And Palaeontology Of The Tertiary Rocks Of The Cheringoma Plateau, Mozambique
Text-fig. 14. Photomicrographs of thin sections of specimen BP/16/1732 Palmoxylon dutoitii from Mhengere Hill, Gorongosa, Mozambique. a: transverse section (TS) with four fibre vascular bundles (fvb) and poorly preserved parenchyma between; b: diagram of one of the fvbs in (a) of the reniform type (f – fibres, mx – metaxylum, p – phloem, px – protoxylum); c: close up of the vascular part of a fvb with 2 metaxylem elements and the collapsed cells to the lower left represents the phloem; d: fvb with 2 metaxylem elements, fibrous part to the left and parencymarous ground tissue to the right; e: lower magnification of fvb in (c); f: fvb with three metaxylem elements and phloem patch below; g: longitudinal section (LS) showing the vascular sections alternating with the fibrous sections; h: LS showing the horizontal thickening on the walls of the metaxylem vessels and a patch of parenchyma to the right (darker cells); i: spheroid echinate phytoliths that are typical of Hyphaene and Borassus.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.