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Text-fig. 3. Geology of the Cheringoma Plateau, Mozambique. Sections and geological map adapted from Tinley (1977). The star symbols close to Mhengere Hill represent fossil wood and stem sites. Note that the fault relationships proposed in the northernmost Inhaminga section require re-examination. The Nguere Hills were called Gadjiua by Tinley (1977). in Stratigraphy, Chronology And Palaeontology Of The Tertiary Rocks Of The Cheringoma Plateau, Mozambique
Text-fig. 3. Geology of the Cheringoma Plateau, Mozambique. Sections and geological map adapted from Tinley (1977). The star symbols close to Mhengere Hill represent fossil wood and stem sites. Note that the fault relationships proposed in the northernmost Inhaminga section require re-examination. The Nguere Hills were called Gadjiua by Tinley (1977).
Data and Code: Spatiotemporal Variability of Fin Whale and Blue Whale Calls Detected by Land Seismometers in the Lower St. Lawrence Seaway
<h3>Code</h3> <p><strong>MATLABWhaleDetectionCodeNWA.zip</strong></p> <p>The code used in the manuscript Spatiotemporal Variability of Fin Whale and Blue Whale Calls Detected by Land Seismometers in the Lower St. Lawrence Seaway<em> </em>(Goblot et al., in review)<em> </em>to detect whale calls in seismic waveforms was written by Alexandre Plourde and uploaded here with permission. This .zip file contains 3 folders, ‘Numerical Methods’, ‘Signal Processing’ and ‘Whale Subroutines’, as well as 3 main scripts (x2 for fin and blue whales). </p> <ul> <li>Pre-processing: <ul> <li>Convert .mseed to SAC files and rename with the format: YYYY.MM.DD.NETWORK.STATION..CHANNEL.SAC. Each SAC file must then be placed in a folder named with the format YYYYMMDD, referred to as events (evs) in the code. Each of these folders must then be placed into a single folder known as the events directory (drE) in the code.</li> </ul> </li> </ul> <ul> <li>Processing: Fin whales <ul> <li>Run ‘RecordWhaleNoiseLSZ.m’ for fin whales. This reads through daily SAC files, and computes fin whale power ratio every 120 s. The folder ‘FinWhalePower’ (drP) should now be created. These contain text files with the power ratios (W) for every window at each station.</li> <li>Run ‘createFinWhaleDectectionList.m' to check which 120s time windows have W > threshold (3.0 in our case). These time windows are stored in the matrix FWD.</li> <li>Run 'RecordFinWhaleCallsLSZ.m' to identify individual whale calls within each of the 120s time segments in the FWD matrix. The labelled call times are stored in the matrix FWC.</li> </ul> </li> </ul> <ul> <li>Processing: Blue whales <ul> <li>Run ‘RecordBlueWhalesLSZ.m’ for fin whales. This reads through daily SAC files, and computes fin whale power ratio every 120 s. The folder ‘BlueWhalePower’ (drP) should now be created. These contain text files with the power ratios (W) for every window at each station.</li> <li>Run ‘createBlueWhaleDectectionList.m' to check which 720s time windows have W > threshold (1.5 in our case). These time windows are stored in the matrix BWD.</li> <li>Run 'RecordFinWhaleCallsLSZ.m' to identify individual whale calls within each of the 720s time segments in the BWD matrix. The labelled call times are stored in the matrix BWC.</li> </ul> </li> </ul> <h3>Data</h3> <p>The whale detection code was applied to seismic waveform data downloaded through the EarthScope Consortium Web Services (<a href="https://service.iris.edu/" target="_blank" rel="noopener">https://service.iris.edu/</a>), including the following seismic network: CN (Natural Resources Canada, 1975). All whale calls were detected using the characteristic reccurence interval method (MATLABWhaleDetectionCodeNWA.zip).</p> <p><strong>Table S2</strong></p> <p><strong>WhaleDetectionsFeb2020Jan2022LSZ.mat</strong></p> <ul> <li>This dataset contains the center time of fin whale and blue whale detections and calls, from land 6 seismometers (CNQ, ICQ, SMQ, SNFQ, PMAQ, RISQ) in the Lower St-Lawrence Seaway between February 2020 and January 2022. <ul> <li>FWD_ <ul> <li>Column 1: list of fin whale detections (2 minute time window with presence)</li> <li>Column 2: corresponding station label</li> </ul> </li> <li>BWD_ <ul> <li>Column 1: list of blue whale detections (12 minute time window with presence)</li> <li>Column 2: corresponding station label</li> </ul> </li> <li>FWC_ <ul> <li>Column 1: list of individual ~1s fin whale calls</li> <li>Column 2: corresponding station label</li> </ul> </li> <li>BWC_ <ul> <li>Column 1: list of individual ~8s blue whale calls</li> <li>Column 2: corresponding station label</li> </ul> </li> <li>stadir: list of stations and labels (1-6)</li> </ul> </li> </ul> <p><strong>Table S3</strong></p> <p>a)<strong> MonthlyBlueWhaleDetectionsOct2015Jan2022.csv</strong> and b) <strong>MonthlyFinWhaleDetectionsOct2015Jan2022.csv</strong></p> <ul> <li> <div> <div> <div> <p>Number of monthly a) fin whale detections and b) blue whale detections from October 2015 to January 2022. Empty cells indicate periods when stations were not operating. Quiet day detections are included.</p> <p>Note the Oct 2015-Feb 2020 catalogue is from Plourde and Nedimović (2022) and includes up to 14 stations throughout this period from the following seismic networks: CN (Natural Resources Canada, 1975) and C8 (Natural Resources Canada, 2002). The Feb 2020-Jan 2022 catalogue is from Goblot et al. (in review) and includes the same stations from Table S1.</p> </div> </div> </div> </li> </ul> <h3>Additional</h3> <p><strong>Movie S1</strong></p> <p><strong>LSLSWhales.mp4</strong></p> <ul> <li>This movie contains an audiovisual representation of a series of fin whale calls and blue whale calls detected by 2 land seismometers in the Lower St-Lawrence Seaway. The fin whale detection was recorded by land seismometer CNQ (Côte-Nord) on Dec 12 2021 from 18:19:40 to 18:21:40. The blue whale detection was recorded by land seismometer SNFQ (Sainte-Félicité) on Aug 22 2021 from 05:36:00 to 05:48:00.</li> <li>The MATLAB soundsc(x) function was applied to seismic waveform data with fin whale and a blue whale calls. The signal with the fin whale detection is bandpassed from 18-21 Hz and the blue whale signal is bandpassed from 16-18 Hz. These signals were sped up 1000x in order to make them audible.</li> <li>The audio file was then uploaded to veed.io to produce a frequency response visualization of the whale calls.</li> <li>More audiovisuals can be viewed <a href="https://seismicsoundscapes.myportfolio.com/" target="_blank" rel="noopener">here</a>.</li> </ul>
DataSet & R code used for the analysis of "Mechanisms of mobbing call recognition: Exploring featural decoding in great tits"
<p>Data and R code used in a playback experiment exploring the mechanisms of mobbing call recognition in the great tit, Parus major. Accepted in Animal Behaviour (2024). </p> <p>This experiment aimed at testing the hypothesis of simple featural interpretation in the great tit (i.e., the fact that receivers can focus on specific acoustic features rather than complete note recognition). </p> <p>The experiment is organised with two parts: first, we test the response of great tits to artificial calls that possess either none or all of the characteristics present in their own calls (and shared with other Parids), and compare their level of response to natural mobbing calls. </p> <p>As the 'complete' treatment triggered the same level fo response than the natural calls, we then create artifical calls with only one of the four features used to create our artifical mobbing calls (large frequency range, low frequency, noise and harmonics). </p> <p> </p> <p>More information can be obtained by contacting Ambre SALIS (salis.ambre87[at]gmail.com)</p>
Supplementary Fig. 1 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Supplementary Fig. 1. Bayesian phylogenetic inference of members of the Eleutherodactylus subgenus Syrrhophus, based on the mitochondrial loci 16S rRNA. All nodes with support of less than 0.5 are collapsed.
Fig. 7 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 7. (A) Map showing the type localities and distribution of Eleutherodactylus species related to E. nitidus in southern Mexico. The stars represent type localities and circles represent additional localities, with each color coded for the species: E. sentinelus sp. nov. (purple), E. maculabialis sp. nov. (green), E. dilatus (pink), E. maurus (yellow), and E. syristes (blue). (B) Map showing the type localities and distribution of Eleutherodactylus species related to E. pipilans in southern Mexico. The red star represents the type locality of E. pipilans and red circles represent additional localities. The black star represents the type locality of E. nebulosus and black circles represent additional localities.
Fig. 11 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 11. Oscillograms and spectrograms of the advertisement calls of adult males of Eleutherodactylus species related to E. maculabialis sp. nov. and E. sentinelus sp. nov. (A) E. syristes from Agua del Obispo, Guerrero, Mexico. (B) E. syristes from east of Hwy. 95, near Acahuizotla, Guerrero, Mexico. (C) E. dilatus from Municipality of Chilpancingo, Guerrero, Mexico. (D) E. maurus from Municipality of Ocuilán, Estado de México, Mexico. (E) E. albolabris from Municipality of Agua de Obispo, Guerrero, Mexico. (F) E. albolabris from Vallecitos, Guerrero, Mexico.
Fig. 6 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 6. (A) Ventral aspect of hand of holotype of Eleutherodactylus maculabialis sp. nov., MZFC 33312 (CIG 00921) from 11.4 km S of Puerto de Gallo, Municipio de Atoyac de Álvarez, Guerrero, Mexico. (B) Ventral aspect of hand of holotype of Eleutherodactylus sentinelus sp. nov., MZFC 33306 (CIG 00913) from 8.9 km SW of Puerto El Balsamo, Municipality of José Azueta, Guerrero, Mexico.
Fig. 14 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 14. Eleutherodactylus nebulosus in life, including specimens formerly assigned to "Eleutherodactylus rubrimaculatus." (A) E. nebulosus from the Municipality of Cintalapa, Chiapas. (B) E. nebulosus from the Municipality of Pijijiapan, Chiapas. (C) E. nebulosus from the Municipality of Mapastepec, Chiapas. (D) "E. rubrimaculatus" (=E. nebulosus) from the Municipality of Huixtla, Chiapas. (E) "E. rubrimaculatus" (=E. nebulosus) from Belisario Dominguez, Chiapas. (F) "E. rubrimaculatus" (=E. nebulosus) from the Municipality of Union Juárez, Chiapas.
Fig. 10 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 10. Comparison photos of Eleutherodactylus species related to E. nitidus in life. (A–I) E. dilatus from Omiltemi, Municipality of Chilpancingo, Guerrero, Mexico. (J–O) E. petersi from Puerto El Balsamo, Municipality of José Azueta, Guerrero, Mexico. (P–R) E. pipilans from Acahuizotla, Municipality of Chilpancingo, Guerrero, Mexico.
Fig. 13 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 13. Map of type localities and distributions of members of the Eleutherodactylus nitidus species group. Purple circles represent localities of an undescribed species related to E. petersi. For the other four species, stars represent the type localities and circles represent additional localities, which are color coded for species: E. orarius (red), E. albolabris (blue), E. nitidus (green), and E. petersi (orange).
Fig. 12 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 12. Bayesian phylogenetic inference of members of the Eleutherodactylus subgenus Syrrhophus, with a focus on the E. nitidus species group, based on the mitochondrial loci 16S rRNA. Black circles represent nodes with a posterior support of 1. All nodes with support of less than 0.5 are collapsed.
Fig. 5 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 5. Some of the paratypes of Eleutherodactylus sentinelus sp. nov. in life. (A–C) MZFC 33305 (CIG 00910); (D–F) MZFC 33304 (CIG 00909); (G–I) MZFC 33032 (CIG 00334); (J–L) MZFC 33031 (CIG 00333); (M–O) MZFC 33033 (CIG 00335) from Puerto El Balsamo, Municipality of José Azueta, Guerrero, Mexico.
Fig. 2 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 2. Some of the paratypes of Eleutherodactylus maculabialis sp. nov. in life. (A–C) MZFC 33310 (CIG 00919); (D–F) MZFC 33311 (CIG 00920); (G–I) MZFC 33314 (CIG 00923) all from type locality; (J–L) MZFC 33321 (CIG 00949); (M–O) MZFC 33318 (CIG 00946); (P–R) MZFC 33317 (CIG 00945) all from the vicinity of Yerba Santa on road to Carrizal de Bravo, Municipality of General Heliodoro Castillo, Guerrero, Mexico.
Fig. 8 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 8. (A) Type locality of Eleutherodactylus maculabialis sp. nov. at 11.4 km S of Puerto de Gallo, Municipio de Atoyac de Álvarez, Guerrero, Mexico. (B) Type locality of Eleutherodactylus sentinelus sp. nov. at 8.9 km SW of Puerto El Balsamo, Municipality of José Azueta, Guerrero, Mexico.
Fig. 9 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 9. Comparison photos of Eleutherodactylus species related to E. nitidus in life. (A–I) E. syristes from the vicinity of Agua de Obispo, Municipality of Chilpancingo, Guerrero, Mexico. (J–O) E. albolabris from Agua de Obispo, Municipality of Chilpancingo, Guerrero, Mexico. (P–R) E. nitidus from Yerba Santa, Municipality of General Heliodoro Castillo, Guerrero, Mexico.
Fig. 4 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 4. Holotype of Eleutherodactylus sentinelus sp. nov., MZFC 33306 (CIG 00913) from 8.9 km SW of Puerto El Balsamo, Municipality of José Azueta, Guerrero, Mexico. (A) Dorsolateral perspective in life. (B) Lateral perspective in life. (C) Ventral perspective in life. (D) Dorsal perspective in preservative. (E) Ventral perspective in preservative.
Fig. 1 in Two new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Southern Mexico, with comments on the taxonomy of related species and their advertisement calls
Fig. 1. Holotype of Eleutherodactylus maculabialis sp. nov., MZFC 33312 (CIG 00921) from 11.4 km S of Puerto de Gallo, Municipio de Atoyac de Álvarez, Guerrero, Mexico. (A) Dorsolateral perspective in life. (B) Lateral perspective in life. (C) Ventral perspective in life. (D) Dorsal perspective in preservative. (E) Ventral perspective in preservative.
Public reference library for edible dormouse calls
<p>The acoustics of small mammals, particularly dormice species, are generally understudied. We explored the vocalisations and acoustic behaviour of the edible dormouse (<em>Glis glis</em>) in various environments in Catalonia (northern Iberian Peninsula) using ultrasound recorders between 2022 and 2023. Up to five different types of calls were identified in various environmental conditions (captivity and free-ranging animals) and developmental stages, from pups to adults. Additionally, one new call type was described, highlighting the plasticity of their vocalisations, and ultrasonic sound production was discovered in pups, suggesting ontogenetic changes in the vocal repertoire. With this project, we emphasise the potential of the acoustic method as a non-invasive tool for studying ecological behaviours and interactions, or early detection of the species in the natural environment.</p> <p>We, hereby, provide an open reference library for edible dormouse calls, laying the groundwork for a better understanding of its acoustics, behaviour and conservation. The compilation provides five clean sequences of high quality for each of the five call types recorded under different environmental conditions (totalling 35 recordings). This includes the chirp (captivity and wild), blow (captivity), aggressive call (captivity and wild), pups during manipulation (wild) and free-ranging pups (wild). The collection of sounds was prepared under the Dormouse Project (<a href="http://www.dormice.org/" target="_blank" rel="noopener">www.dormice.org</a>)</p> <p>This work was supported by the Barcelona Zoo Fundation under the Research and Conservation Program Grant; Generalitat de Catalunya under Grant number ARD264/23/000001; and Diputació de Barcelona under Grant number 2023/0005732.</p>
Dataset: Credit Suisse X-Links Crude Oil Shares Covered Call ETNs (USOI) Stock Performance
This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
Dataset: Credit Suisse X-Links Silver Shares Covered Call ETN (SLVO) Stock Performance
This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.