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123
datasets available to search
ShareScore release 0.9.0
Dataset results
123 results for “hydroxymethylation”
TET2 regulates tRNA fragment generation by RNA hydroxymethyl modification
GEO Series GSE133472. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Gene body DNA hydroxymethylation restricts magnitude of transcriptional changes during aging.
GEO Series GSE221124. Mus musculus. 64 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
TET1-mediated DNA hydroxymethylation controlling ferroptosis resistance in cancer [RNA-seq]
GEO Series GSE240524. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax.
GEO Series GSE41060. Oxytricha trifallax. 6 samples. Type: Methylation profiling by high throughput sequencing.
Individual retrotransposon integrants are differentially controlled by KZFP/KAP1-dependent histone methylation, DNA methylation and TET-mediated hydroxymethylation in naïve embryonic stem cells
GEO Series GSE95720. Mus musculus. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Altered Hydroxymethylation is seen at regulatory regions in pancreatic cancer and regulates oncogenic pathways [ATAC-seq]
GEO Series GSE97008. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Integrin α5-SRC signaling induces TET1 mediated hydroxymethylation of genes critical for maintenance of hepatic polarity
GEO Series GSE162409. Mus musculus. 12 samples. Type: Methylation profiling by high throughput sequencing.
Exploration of hydroxymethylation in Kagami-Ogata syndrome caused by hypermethylation of imprinting control regions
GEO Series GSE71328. Homo sapiens. 20 samples. Type: Methylation profiling by genome tiling array.
Brain and Blood Hydroxymethylation in Mice after Lead (Pb) and DEHP Exposure
GEO Series GSE229717. Mus musculus. 142 samples. Type: Methylation profiling by high throughput sequencing.
Highly-sensitive DNA hydroxymethylation analysis to aid clinic evaluation of myelodysplastic syndromes (MDS)
GEO Series GSE148357. Homo sapiens. 83 samples. Type: Methylation profiling by high throughput sequencing.
Roles of DNA hydroxymethylation versus DNA formylation and carboxylation in neural stem cells [EhmC-seq]
GEO Series GSE287656. Mus musculus. 3 samples. Type: Methylation profiling by high throughput sequencing.
Integrin α5-SRC signaling induces TET1 mediated hydroxymethylation of genes critical for maintenance of hepatic polarity.
GEO Series GSE159053. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Roles of DNA hydroxymethylation versus DNA formylation and carboxylation in neural stem cells [CUT&Tag]
GEO Series GSE298639. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3
GEO Series GSE87749. Homo sapiens; Mus musculus. 56 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
DNA methylation and hydroxymethylation profiles reveal possible role of highly methylated TLR signaling on Fasciola gigantica excretory/secretory products (FgESPs) modulation of buffalo DCs
GEO Series GSE125736. Bubalus bubalis. 16 samples. Type: Methylation profiling by high throughput sequencing.
Unified analysis of DNA methylation, hydroxymethylation and chromatin accessibility through targeted DNA labeling
GEO Series GSE231929. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing; Other.
Analysis of Genome-wide 5-Hydroxymethylation of Blood Samples Stored in Differing Anticoagulants: Opportunities for the Expansion of Clinical Resources for Epigenetic Research
GEO Series GSE230027. Homo sapiens. 120 samples. Type: Methylation profiling by high throughput sequencing.
Whole-genome profiling of DNA methylation and hydroxymethylation identify distinct regulatory programs among innate lymphocytes
GEO Series GSE190944. Mus musculus. 22 samples. Type: Methylation profiling by high throughput sequencing.
Effects of gestational exposure to air pollution on placental 5-Hydroxymethylation mark
GEO Series GSE221014. Mus musculus. 14 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide mapping of DNA hydroxymethylation in osteoarthritic chondrocytes
GEO Series GSE64395. Homo sapiens. 15 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.