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193 results for “marine ecology”
Fine-scale intraspecific niche partitioning in a highly mobile, marine megafauna species: implications for ecology and conservation
<p>A species may partition its realized ecological niche along bionomic and/or scenopoetic axes due to intraspecific competition for limited resources. How partitioning manifests depends on resource needs and availability by and for the partitioning groups. Here we demonstrate the utility of analyzing short- and long-term stable carbon and nitrogen isotope ratios from imperiled marine megafauna to elucidate realized niche partitioning in these species. We captured 113 loggerhead (<em>Caretta</em> <em>caretta</em>) sea turtles at a high-use area near Crystal River, Florida, between 2016–2022, comprising 53 subadults, 10 adult males, and 50 adult females. Isotopic analyses indicated that loggerheads partition their realized ecological niche by life stage, along a scenopoetic axis. Most adults likely forage and reside in shallow areas of the study site, with most subadults displaying habitat switching between deeper locations to forage and shallower locations to rest. Some subadults, like adults, also forage and reside in shallow areas, and may display behaviors to avoid intraspecific competition. Analysis of stable isotopes with different turnover rates was critical for this characterization of intraspecific niche partitioning in loggerhead turtles, which has direct implications for ongoing research and conservation efforts for this and other imperiled species.</p>
Ecological vs. climate uncertainty in future marine ecosystems: lessons learned from krill in a major upwelling region
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Data from: Age-based δ15N and δ13C values of otolith organic matter reveal trophic ecology in marine fishes
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Fine-scale intraspecific niche partitioning in a highly mobile, marine megafauna species: implications for ecology and conservation
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Ecological and behavioural drivers of offspring size in marine teleost fishes
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Data from: Metabolic traits and thresholds to inform marine ecological conservation and restoration
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Data from: Form–function relationships in a marine foundation species depend on scale: a shoot to global perspective from a distributed ecological experiment
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FIGURE 2 in A new genus and two new species of sea stars (Family Asterinidae) from Indonesian marine lakes, with notes on habitat and feeding ecology
FIGURE 2. Internal structures of Limnasterias gen. nov., A–B Limnasterias oinops holotype, MZB.Astr.00040: A. Ray and abactinal surface removed to show absence of superambulacral plates (arrow) B. Appressed superactinal plate at distal edge of interradius (arrow) C. Limnasterias estradivariae paratype, MZB.Astr.00047, abactinal surface and ray removed, showing interradial pillar (arrow) and absence of superambulacral plates D. L. estradivariae paratype, MZB.Astr.00048, superactinal plate (arrow). Note that residual fibers from packaging are present in Fig. 2C.
FIGURE 4 in A new genus and two new species of sea stars (Family Asterinidae) from Indonesian marine lakes, with notes on habitat and feeding ecology
FIGURE 4. Live and in situ observations of Limnasterias gen. nov. A. Limnasterias oinops, paratype, MZB.Astr.00042, live animal. B. Regurgitated remains of cannibalized L. oinops with visible furrow spines (arrow). C. Limnasterias estradivariae, paratype, MZB.Astr.00047, live animal. D. L. oinops on macroalgae. E. L. estradivariae on macroalgae.
Data from: Scale-dependent foraging ecology of a marine top predator modelled using passive acoustic data
1. Understanding which environmental factors drive foraging preferences is critical for the development of effective management measures, but resource use patterns may emerge from processes that occur at different spatial and temporal scales. Direct observations of foraging are also especially challenging in marine predators, but passive acoustic techniques provide opportunities to study the behavior of echolocating species over a range of scales. 2. We used an extensive passive acoustic dataset to investigate the distribution and temporal dynamics of foraging in bottlenose dolphins using the Moray Firth (Scotland, UK). Echolocation buzzes were identified with a mixture model of detected echolocation inter-click intervals, and used as a proxy of foraging activity. A robust modelling approach accounting for autocorrelation in the data was then used to evaluate which environmental factors were associated with the observed dynamics at two different spatial and temporal scales. 3. At a broad scale, foraging varied seasonally, and was also affected by sea-bed slope and shelf-sea fronts. At a finer scale, we identified variation in seasonal use and local interactions with tidal processes. Foraging was best predicted at a daily scale, accounting for site-specificity in the shape of the estimated relationships. 4. This study demonstrates how passive acoustic data can be used to understand foraging ecology in echolocating species, and provides a robust analytical procedure for describing spatio-temporal patterns. Associations between foraging and environmental characteristics varied according to spatial and temporal scale, highlighting the need for a multi-scale approach. Our results indicate that dolphins respond to coarser-scale temporal dynamics, but have a detailed understanding of finer-scale spatial distribution of resources.
Data from: Ecological opportunities and specializations shaped genetic divergence in a highly mobile marine top predator
Environmental conditions can shape genetic and morphological divergence. Release of new habitats during historical environmental changes was a major driver of evolutionary diversification. Here, forces shaping population structure and ecotype differentiation ('pelagic' and 'coastal') of bottlenose dolphins in the North-east Atlantic were investigated using complementary evolutionary and ecological approaches. Inference of population demographic history using approximate Bayesian computation indicated that coastal populations were likely founded by the Atlantic pelagic population after the Last Glacial Maxima probably as a result of newly available coastal ecological niches. Pelagic dolphins from the Atlantic and the Mediterranean Sea likely diverged during a period of high productivity in the Mediterranean Sea. Genetic differentiation between coastal and pelagic ecotypes may be maintained by niche specializations, as indicated by stable isotope and stomach content analyses, and social behaviour. The two ecotypes were only weakly morphologically segregated in contrast to other parts of the World Ocean. This may be linked to weak contrasts between coastal and pelagic habitats and/or a relatively recent divergence. We suggest that ecological opportunity to specialize is a major driver of genetic and morphological divergence. Combining genetic, ecological and morphological approaches is essential to understanding the population structure of mobile and cryptic species.
Data from: Heterogeneity of ecological patterns, processes and funding of marine manipulative field experiments conducted in Southeastern Pacific coastal ecosystems
Ecological manipulative experiments conducted in marine coastal ecosystems have substantially improved ecological theory during the last decades, and have provided useful knowledge for the management and conservation of coastal ecosystems. Although different studies report global trends in ecological patterns worldwide, Southeastern Pacific coastal ecosystems have been poorly considered. Given that the SE Pacific coast encompasses diverse coastal ecosystems, consideration of studies conducted along this range can shed light on the heterogeneity of processes regulating coastal communities. We reviewed the biotic interactions and habitat type considered, as well as the complexity in terms of spatial and temporal extent of manipulative field experimental studies conducted along the SE Pacific coast from 0°S to 56° S (Ecuador to Chile). We test the effect of funding reported by different studies as a main factor limiting experimental complexity. From field ecological studies published from 1970 to 2016, we found that 81 studies were truly manipulative, in which one or multiple factors were "manipulated". Around 77% of these studies were located between 21°S to 40°S, and conducted in intertidal rocky habitats. An increase in experimental studies was observed between 2010 and 2015, especially focused on herbivore-alga interactions, although we found that both the temporal and spatial extent of these studies have shown a decrease in recent decades. Funding grant amount reported had a positive effect on elapsed time of field experiments, but no effect was observed on spatial extent or in the biotic interactions considered. Elapsed time of experiments was different among the main biotic interactions considered i.e. herbivory, predation, and competition. We suggest that to further progress in applied ecological knowledge, it will be necessary to consider pollution and urbanization processes explicitly using a field experimental framework. This information could improve our understanding of how ecosystems present along the SE Pacific coast respond to climate change and increased levels of human interventions.
Data from: Latitudinal variation in ecological opportunity and intraspecific competition indicates differences in niche variability and diet specialization of Arctic marine predators
Individual specialization (IS), where individuals within populations irrespective of age, sex, and body size are either specialized or generalized in terms of resource use, has implications on ecological niches and food web structure. Niche size and degree of IS of near-top trophic-level marine predators have been little studied in polar regions or with latitude. We quantified the large-scale latitudinal variation of population- and individual-level niche size and IS in ringed seals (Pusa hispida) and beluga whales (Delphinapterus leucas) using stable carbon and nitrogen isotope analysis on 379 paired ringed seal liver and muscle samples and 124 paired beluga skin and muscle samples from eight locations ranging from the low to high Arctic. We characterized both within- and between-individual variation in predator niche size at each location as well as accounting for spatial differences in the isotopic ranges of potential prey. Total isotopic niche width (TINW) for populations of ringed seals and beluga decreased with increasing latitude. Higher TINW values were associated with greater ecological opportunity (i.e., prey diversity) in the prey fish community which mainly consists of Capelin (Mallotus villosus) and Sand lance (Ammodytes sp.) at lower latitudes and Arctic cod (Boreogadus saida) at high latitudes. In beluga, their dietary consistency between tissues also known as the within-individual component (WIC) increased in a near 1:1 ratio with TINW (slope = 0.84), suggesting dietary generalization, whereas the slope (0.18) of WIC relative to TINW in ringed seals indicated a high degree of individual specialization in ringed seal populations with higher TINWs. Our findings highlight the differences in TINW and level of IS for ringed seals and beluga relative to latitude as a likely response to large-scale spatial variation in ecological opportunity, suggesting species-specific variation in dietary plasticity to spatial differences in prey resources and environmental conditions in a rapidly changing ecosystem.
Data from: Marine foraging ecology influences mercury bioaccumulation in deep-diving northern elephant seals
Mercury contamination of oceans is prevalent worldwide and methylmercury concentrations in the mesopelagic zone (200–1000 m) are increasing more rapidly than in surface waters. Yet mercury bioaccumulation in mesopelagic predators has been understudied. Northern elephant seals (Mirounga angustirostris) biannually travel thousands of kilometres to forage within coastal and open-ocean regions of the northeast Pacific Ocean. We coupled satellite telemetry, diving behaviour and stable isotopes (carbon and nitrogen) from 77 adult females, and showed that variability among individuals in foraging location, diving depth and δ13C values were correlated with mercury concentrations in blood and muscle. We identified three clusters of foraging strategies, and these resulted in substantially different mercury concentrations: (i) deeper-diving and offshore-foraging seals had the greatest mercury concentrations, (ii) shallower-diving and offshore-foraging seals had intermediate levels, and (iii) coastal and more northerly foraging seals had the lowest mercury concentrations. Additionally, mercury concentrations were lower at the end of the seven-month-long foraging trip (n = 31) than after the two-month- long post-breeding trip (n = 46). Our results indicate that foraging behaviour influences mercury exposure and mesopelagic predators foraging in the northeast Pacific Ocean may be at high risk for mercury bioaccumulation.
Data from: Proteomic evidence of a paedomorphic evolutionary process within a marine snail species: a strategy for adapting to extreme ecological conditions?
The exposed and sheltered ecotypes of the marine snail Littorina saxatilis from European rocky shores are considered a key model system to study adaptation and ecological speciation. Previous studies showed that two ecotypes (RB and SU) of this species in NW Spain have differently adapted to different shore levels and microhabitats. In order to understand how this divergent adaptive process has been accomplished, we followed a quantitative proteomic approach to investigate the proteome variation in a number of different biological factors, i.e. ecotype, ontogeny and their interactions. This approach allowed testing the hypothesis that one of the ecotypes has evolved by paedomorphosis, and also whether or not the molecular mechanisms related to ecotype differentiation are set up in early developmental stages. Additionally the identification of some candidate proteins by mass spectrometry provides some functional insights about these evolutionary processes. Results from this study provided evidence of higher ontogenetic differentiation at proteome level in the RB (metamorphic) than in SU (paedomorphic) ecotype that point to the possibility of juvenile stage retention in this latter ecotype. The level of protein expression (proteome) differences between ecotypes maintained nearly constant from late embryonic stages to adulthood, although some proteins involved in these changes considerably differed in embryonic compared to other ontogenetic stages. Paedomorphosis may be the evolutionary response of the SU ecotype of solving the trade-off during sexually immaturity that is caused by the evolution of small size arising from adaptation to the wave exposed habitat. Some potential candidate genes of adaptation related to energetic metabolism have been identified, providing a promising baseline for future functional analyses.
FIGURE 2. a in Notes on morphology and ecological difference between species of pontoniine shrimp genus Crinotonia Marin (Caridea: Palaemonidae) associated with shallow-water feather stars Phanogenia spp. (Crinoidea: Comasteridae)
FIGURE 2. a — Crinotonia attenuatus (Bruce, 1971), ovigerous female; b — Crinotonia anastasiae Marin, 2006, nonovigerous female; c, d — feather star Phanogenia gracilis (Hartlaub, 1890), host of Crinotonia attenuatus (Bruce, 1971), 15 m; e — yellow-black feather star Phanogenia sp., host of Crinotonia anastasiae Marin, 2006, 25 m; f — black feather star Phanogenia sp. (upper) and whitish-yellow Phanogenia gracilis (lower) living in the same habitats, depth 25 m.
FIGURE 1. Crinotonia anastasiae Marin, 2006 in Notes on morphology and ecological difference between species of pontoniine shrimp genus Crinotonia Marin (Caridea: Palaemonidae) associated with shallow-water feather stars Phanogenia spp. (Crinoidea: Comasteridae)
FIGURE 1. Crinotonia anastasiae Marin, 2006 (a, b, d) and Crinotonia attenuatus Bruce, (1971) (c, e, f): a, b — finger of major pereiopod II; c — chela of pereiopod I; d, e — dactylus of pereiopod III; f — appendix masculina.
FIGURE 1 in An annotated checklist of the non-marine ostracods (Crustacea) of Algeria with some ecological notes
FIGURE 1. Map of Algeria shows 18 provinces sampled during this study. 1; Annaba (25 samples), 2; El-Tarf (33 samples), 3; Skikda (13 samples), 4; Guelma (4 samples), 5; Constantine (2 samples), 6; Tébessa (9 samples), 7; Sétif (2 samples), 8; Tizi Ouzou (2 samples), 9; Medea (1 sample), 10; Batna (4 samples), 11; Oum El Bouaghi (8 samples), 12; Khenchela (2 sample), 13; Djelfa (2 samples), 14; El Oued (1 sample), 15; Oran (5 samples), 16; Rélizane (1 sample), 17; Sidi Bel Abbes (1 sample), and 18; Souk-Ahras (2 samples).
Data for : Ecological associations distribution modelling of marine plankton at global scale
<p>Git repository : https://gitlab.univ-nantes.fr/combi-ls2n/adm</p>
In a comfort zone and beyond – ecological plasticity of key marine mediators
<p>Copepods of the genus Calanus are the key components of zooplankton. Understanding their response to a changing climate is crucial to predict the functioning of future warmer high-latitude ecosystems. Although specific Calanus species are morphologically very similar, they have different life strategies and roles in ecosystems. In this study, C. finmarchicus and C. glacialis were thoroughly studied with regard to their plasticity in morphology and ecology both in their preferred original water mass (Atlantic vs. Arctic side of the Polar Front) and in suboptimal conditions (due to, e.g., temperature, turbidity, and competition in Hornsund fjord). Our observations show that 'at the same place and time', both species can reach different sizes, take on different pigmentation, be in different states of population development, utilize different reproductive vs. lipid accumulation strategies, and thrive on different foods. Size was proven to be a very mutable morphological trait, especially with regard to reduced length of C. glacialis. Both species exhibited pronounced red pigmentation when inhabiting their preferred water mass. In other domains, C. finmarchicus individuals tended to be paler than C. glacialis individuals. Gonad maturation and population development indicated mixed reproductive strategies, although a surprisingly similar population age structure of the two co-occurring species in the fjord was observed. Lipid accumulation was high and not species-specific, and its variability was due to diet differences of the populations. According to the stable isotope composition, both species had a more herbivorous diatom-based diet in their original water masses. While the diet of C. glacialis was rather consistent among the domains studied, C. finmarchicus exhibited much higher variability in its feeding history (based on lipid composition). Our results show that the plasticity of both Calanus species is indeed impressive and may be regulated differently, depending on whether they live in their 'comfort zone' or beyond it.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.