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6,498 results for “physics”
Virgin Islands National Park: Coral Reef: Physical Measurements
These data have been utilized for several publications analyzing different aspects of seawater temperature, including Edmunds: Royal Society 2006, Green et al: Journal of Experimental Marine Biology and Ecology 2010, Green and Edmunds: Journal of Experimental Marine Biology and Ecology 2011, and Edmunds: Marine Ecology Project Series 2013. Temperatures were averaged by day and month and used to calculate annual mean and range using monthly mean temperatures. Daily temperatures were used to categorize days as hot (> 29.3°C) or cold (≤ 26.0°C), with hot days exceeding the coral bleaching threshold for St. John (http://coralreefwatch.noaa.gov/satellite), and ‘cold days’ less than or equal to the lower 12th percentile of daily seawater temperatures in Great Lameshur Bay between 1989-2005 (Edmunds 2006).This dataset cotains data annually updated data ongoing since July 1999.
Crossing Treeline: Bacterioplankton community composition in alpine and subalpine lakes of the Rocky Mountain southern ecoregion and associated physical and chemical characteristics
This dataset includes lake water samples collected in the summer of 2016 from 16 different mountain lakes in the Rocky mountains in both Rocky Mountain National Park and the Snowy Range of southern Wyoming. Each lake was sampled twice: once in the early summer when hydrologic connections with the surrounding terrestrial environment were high and again in the late summer when hydrologic connections were low. The main goal of the study was to compare communities of bacterioplankton in alpine and subalpine lakes to determine if communities differed across treeline as soil microbes in the surrounding terrestrial environment were. To do so, we collected water samples from the deepest point of each lake, mixed it with a surface water sample and characterized bacterioplankton communities with 16S sequencing technology. Additionally, we wanted to identify abiotic factors that may correlate with community dissimilarity and characterized a suite of chemical attributes for each lake. Lake characteristics reported included surface temperature, soluble reactive phosphorous (SRP), ammonia (NH3+), pH, total dissolved nitrogen (TDN), total dissolved phosphorus (TDP), and total dissolved organic carbon (DOC), and chlorophyll a (chl-a).
Baltimore Ecosystem Study: Physical, chemical and biological properties of forest and home lawn soils
Abstract: One-meter soil cores were taken to evaluate soil texture, bulk density, carbon and nitrogen pools, microbial biomass carbon and nitrogen content, microbial respiration, potential net nitrogen mineralization, potential net nitrification and inorganic nitrogen pools in 32 residential home lawns that differed by previous land use and age, but had similar soil types. These were compared to soils from 8 forested reference sites. Purpose: Soil cores were obtained from residential and forest sites in the Baltimore, MD USA metropolitan area. The residential sites were mostly within the Gwynns Falls Watershed (-76.012008W, -77.314183E, 39.724847N, 38.708367S and approximately 17 km2) Lawns on residential sites were dominated by a variety of cool season turfgrasses. Forest soil cores were taken from permanent forest plots of the Baltimore Ecosystem Study (BES) LTER (Groffman et al. 2006). These remnant forests are over 100 years old with soils that were comparable in type and texture to those underlying the residential study sites. Soils from all sites were from the Manor series (coarse-loamy, micaceous, mesic Typic Dystrudepts), which are well-drained upland soils with loamy textures and bedrock at 5 to 10 feet below the soil surface. To aid the site selection process we used neighborhoods in the Baltimore City metropolitan area that have been mapped using HERCULES, a high resolution land cover classification system designed to assist in the study of human-ecological systems (Cadenasso et al. 2007). Using HERCULES and additional data sources, we identified residential sites that were similar except for single factors that we hypothesized to be important predictors of ecosystem dynamics. These factors included land use history (agriculture and forest, n = 10 and n = 22), housing density (low and medium/high, n = 9 and n = 23), and housing age (4 to 58 yrs old, n = 32). Housing age was acquired from the Maryland Property View database. Prior land use was determined b
Eight Mile Lake Research Watershed, Carbon in Permafrost Experimental Heating Research (CiPEHR): physical and chemical properties of soils, 2009-2017
The Carbon in Permafrost Experimental Heating Research (CiPEHR) project addresses the following questions: 1) Does ecosystem warming cause a net release of C from the ecosystem to the atmosphere?, 2) Does the decomposition of old C, that comprises the bulk of the soil C pool, influence ecosystem C loss?, and 3) How do winter and summer warming alone, and in combination, affect ecosystem C exchange? We are answering these questions using a combination of field and laboratory experiments to measure ecosystem carbon balance and radiocarbon isotope ratios at a warming experiment located in an upland tundra field site near Healy, Alaska in the foothills of the Alaska Range. This data set includes measurements of moisture, bulk density, ash, carbon, and nitrogen concentrations, and carbon and nitrogen stable isotope composition (δ13C and δ15N) at depth increments in soil cores collected in 2009, 2010, 2011, 2013 and 2017 from warming and control treatment plots.
Physical Hydrologic Data for the National Audubon Society's 16 Research Sites in coastal mangrove transition zone of southern Florida, March 1986 - ongoing
Temperature, salinity and depth were continuously collected using Hydrolab/Hach sensors within the coastal mangrove transition zone at 16 sites from southern Biscayne Bay to Cape Sable. Data were collected at 12 sites within the coastal mangrove zone of Everglades National Park, incorporating the Cape Sable, Taylor River and Panhandle region. Data were collected at 4 sites within the coastal mangrove zone of southern Biscayne Bay, incorporating the Manatee Bay, Barnes Sound, and Card Sound regions. Rainfall, pH, and dissolved oxygen were collected at a number of these sites with varying periods of record.
Abiotic monitoring of physical characteristics in porewaters and surface waters of mangrove forests from the Shark River Slough and Taylor Slough, Everglades National Park (FCE LTER), South Florida, USA, December 2000 - ongoing
Data on porewater salinity, temperature, conductivity, pH and redox have been collected to help explain patterns found in porewater nutrient concentrations that were sampled in the same plots. See knb-lter-fce.1171 (https://portal.edirepository.org/nis/mapbrowse?scope=knb-lter-fce&identifier=1171) for related porewater-nutrient-concentration data.
AGW01 Long-term measurement of groundwater physical and chemical properties from wells on watersheds N04D and N01B at Konza Prairie
In 1988 and 1990, 31 wells were installed at 20 sites within watershed N04D at Konza Prairie Biological Station to allow long-term monitoring of groundwater physical and chemical properties. Subsequently, four additional wells were installed in N04D in 1997, and five wells were installed in an adjacent watershed, N01B, in 2020. Most of the wells are nested to include wells completed in alluvium/colluvium and two Permian limestone units, the Morrill Limestone and the Eiss Limestone. The wells are completed along transects perpendicular to the main drainage in each watershed. Every four to six weeks, water samples and water depth measurements have been collected at subsets of the wells in N04D since 1991 and in N01B since 2021. At the same time, stream samples are collected from the outlet in N04D and N01B when the stream is flowing, as well as two upstream locations in N04D. Moreover, since 2024, stream samples are also collected at the same time from the outlet of a third watershed, N02B, when the steam is flowing. Methodologies have evolved since 1991 as detailed in the method description, though the primary goal of assessing groundwater and surface water major ion composition, pH, temperature, and groundwater level has been constant since 1991.
PBG10 Soil physical and chemical characteristics in the Patch-Burn Grazing experiment at Konza Prairie
PBG datasets are associated with a long-term, large-scale study that is addressing the effects of fire-grazing interactions in the context of a Patch-Burn Grazing management system designed to promote grassland heterogeneity. Effects of patch-burn grazing management on plant and animal diversity and the nature and variety of wildlife habitat are being assessed in two replicate management units, each consisting of three pastures (watersheds) designated C03A/C03B/C03C and C3SA/C3SB/C3SC. In each patch-burn grazing unit, one watershed is burned and two that are left unburned in a given year. The burning treatments are rotated annually so that each pasture is burned every third year. Each patch-burn grazing unit is paired with an annually-burned pasture for comparison with traditional grazing systems (C01A and C1SB). All grazing units are stocked with cow/calf pairs from approximately 1 May until 1 Oct at a stocking density equal to 3.2 ha per cow/calf. To examine the impact of patch burning and grazing in all 8 units, we monitor changes in plant species composition, residual biomass, grassland bird populations, insect populations, small mammal populations, soil nutrients, and stream water quality1 (1C3SA/C3SB/C3SC unit only). The KSU Department of Animal Science monitors cattle performance, including weight gain and body condition to assess the economic feasibility of using patch-burn management on a widespread basis. This data set focuses on measuring bulk density, soil organic matter, pH, cation exchange capacity, soil cations (Ca++, Mg++, Na+), phosphorous and total Kjeldahl nitrogen of soils at the vegetation transects in C3SA, C3SB, C3SC. C1SB, C3A, C3B, C3C, and C1A.
RCS01 Recovery and relative influence of root, microbial, and structural properties of soil on physically sequestered carbon stocks in restored grassland at Konza Prairie
Managing soil to sequester C can help mitigate increasing CO2 in the atmosphere. To maximize this ecosystem service, more knowledge of factors influencing C sequestration is needed. The objectives of this study were to (i) quantify recovery of the roots, microbial biomass and composition, and soil structure across a chronosequence of grassland restorations and (ii) use a structural equation model to develop a data-based hypothesis on the relative influence of physical and biological soil properties on the soil C aggregate fraction diagnostic of sequestered C. We hypothesized measured variables would recover with restoration age. Belowground plant biomass and tissue quality (C/N ratio), soil microbial biomass C, phospholipid fatty acid (PLFA) concentrations, soil structure, and soil C stocks in the bulk soil and each aggregate fraction were quantified from a cultivated field, prairies restored for 1 to 35-yr (n = 6), and a never-cultivated (native) prairie. Root biomass, microbial biomass C, arbuscular mycorrhizal fungi (AMF) PLFA biomass across the chronosequence increase to resemble native prairie following 35 yr of restoration. Many aspects of soil structure (i.e., bulk density, proportional mass of aggre- gate fractions, and aggregate mean weighted diameter) and the distribution C among soil fractions, including C in the micro-within-macro aggregate fraction (sequestered C), also became representative of native prairie within 35 yr of restoration. Total soil C stock and physically protected C increased at a similar rate (23 and 27 g C m-2 yr-1) respectively, across the chronosequence. After 35 yr of restoration, 50% of the total C pool was physically protected. The structural equation modeling developed by these data hypothesizes that microbial biomass C and AMF biomass (microbial composition) have the strongest causal influence on physically protected C. This model needs to be tested using independent sites to achieve greater inference.
SPW01 Spatial and physical characteristics of bison wallows on Konza Prairie since 2011
The objective of this study was to characterize spatial and physical attributes of bison wallows at the Konza Prairie Biological Station in northeastern Kansas. We used aerial imagery from two different years (2011 and 2019) to assess the abundance and spatial distribution of wallows in relation to fire frequency, elevation, and slope. We also recorded physical characteristics for a randomly selected subset of wallows (n = 966) and analyzed these data in relation to the same landscape features. Results indicate that wallows are more abundant on areas characterized by combinations of more frequent burning, higher elevations, and little or no slope. Wallows were smaller in areas burned more often and shallower at higher elevations, particularly when located on grazing lawns. Terrestrial plants were found in approximately 72.1% of the wallows sampled, and their prevalence increased with increasing slope. We found some quantity of aquatic plants in approximately 7.1% of the sampled wallows. The probability of finding aquatic vegetation in wallows was higher on grazing lawns and in areas burned less frequently, particularly every 20 years.
AGW02 Measurement of groundwater physical and chemical properties from wells in contrasting land uses near Kings Creek, Konza Prairie
Wells were drilled in two sites on Konza Prairie Biological Station in April, 1993 approximately 100 m from Kings Creek. The two sites are located in a grassland and an agricultural area. The grassland site (K01A) is an old field that was planted with brome sometime prior to 1976. It has not been grazed for 25 years and is burned in spring every 1-2 years. The agricultural site is currently under a mix of cultivation and restoration plots. Historically, it was cultivated from sometime between 1939 and 1950 to the present. It is approximately 1 km downstream in an area geologically similar to K01A. The soil at both sites is mapped as Reading silt loam (fine, mixed, mesic Typic Arguidolls). Samples are taken monthly by PVC bailer following removal of 2 times the well volume. Samples are analyzed with same methods as used for LTER stream water chemistry.
NSC01 Chemistry and physical characteristics of soils from Konza LTER watersheds with different fire and grazing treatments
Soil chemical and physical characteristics are quantified on selected LTER watersheds adjacent to LTER vegetation sampling plots. Sampling was initiated in 1982, and is repeated every five years. A subset of variables (e.g., pH, Bray extractable P, total C, exchangeable cations) is measured on all sample dates, while additional specific variables (e.g., bulk density, soil texture, CaCO3 content, trace metals, extractable inorganic N) are measured less frequently. Methods for C and N analysis have changed over time. C content of samples from 1982, 1987 and 1997 was derived from Walkley-Black measurements of % soil organic matter (OM) content, using a conversion factor of 1.72 (%C = %OM / 1.72). Soil C content of samples from 1992, 2002 and later were determined by dry combustion and gas chromatography (i.e., Carlo-Erba C/N analyzer). N content of samples prior to 1992 was based on Kjeldahl digeston. N content of samples from 1992 on were determined by dry combustion and gas chromatography (i.e., Carlo-Erba C/N analyzer). Additional details regarding sampling protocols and analytical methods are available in the Konza LTER Methods Manual.
Patterns in soil and physical properties of the Bisley Watersheds 1 and 2 (Big Dig 1988, Big Dig 1990)
(1) Exchangeable cation concentrations were measured using different soil extracting procedures (fresh soil and air-dried and ground soil) to establish a range of nutrient availability in the soil, and to determine the relationship between different, but commonly used laboratory protocols.(2) Soils extracted using fresh soils generally yielded significantly lower exchangeable Ca , Mg, and K concentrations than soils which were dried and ground prior to extraction. Soil nutrients generally decreased with depth in the soil.(3) Several soil properties varied predictably across the landscape and could be viewed in the context of a simple catena model. In the surface soils, exchangeable base cation concentrations and pH decreased along a gradient from ridge tops to riparian valleys, while soil organic matter, exchangeable Fe and acidity increased along this gradient. On the ridges, N,P, and K were positively correlated with soil organic matter; on slopes, N and P were positively correlated with organic matter, and Ca, Kg, and pH were negatively correlated with exchangeable Fe. (4) Soil nutrient availability in the upper catena appears to be primarily controlled by biotic processes, particularly the accumulation of organic matter. Periodic flooding and impeded drainage in the lower catena resulted in a more heterogeneous environment. Drying and grinding the soil prior to extraction had a greater impact on exchangeable cations from the upper catena than in the valley positions, probably due to greater soil organic matter content. See Silver, W.L., F.N. Scatena, A.H. Johnson, T.G. Siccama, and M.J. Sanchez. 1994. Nutrient availability in a montane wet tropical forest in Puerto Rico: spatial patterns and methodological considerations. Plant and Soil 164:129-145. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the Univ
Physical environment of the Luquillo Forest Dynamics Plot (LFDP), Puerto Rico
This file contains data that describe the physical and environmental attributes of the LFDP. The attributes include elevation, topography type, and percentage slope. All data are given for the 20 m by 20 m quadrat scale. Information on soils are taken form an interpolation of the soil map produced by the Natural Resources Conservation Service, US Department of Agriculture (Soil Survey 1995). Other information from the elevation of each of the corner posts defining the quadrats.The National Science Foundation requires that data from projects it funds are posted on the web two years after any data set has been organized and “cleanedâ€. The data from each census of the LFDP will be updated at intervals as each survey of the LFDP shows errors in the previous data collection. After posting on the web, researchers who are not part of the project are then welcome to use the data. Given the enormous amount of time, effort and resources required to manage the LFDP, obtain these data, and ensure data accuracy, LFDP Principal Investigators request that researchers intending to use this data comply with the requests below. Through complying with these requests we can ensure that the data are interpreted correctly, analyses are not repeated unnecessarily, beneficial collaboration between users is promoted and the Principle Investigators investment in this project is protected. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Soil Lake Inundation Moat Experiment (SLIME): Physical, chemical, and biological measurements from planktonic water columns, McMurdo Dry Valleys, Antarctica (2018-2020)
The Soil Lake Inundation Moat Experiment (SLIME) was developed by the McMurdo Dry Valleys Long Term Ecological Research (MCM LTER) project to investigate the ecological function of lake moats in Antarctica. These moats form during the austral summer when the margins of permanently ice-covered, closed-basin lakes melt, creating open-water zones, or ‘moats,’ between the shoreline and the thick (3-5 m) perennial ice cover. To study these habitats, sampling transects were established on the north and south shores of Lake Fryxell and the East Lobe of Lake Bonney. This data package includes three seasons of physical, chemical, and biological measurements from the planktonic water columns of these lakes, collected from SLIME transects between January 2018 and January 2020. Parameters include water temperature, conductivity, ion and nutrient concentrations, chlorophyll-a concentrations, as well as fluorescence and photochemical efficiencies for major algal classes. NCBI accession numbers are also provided for the microbial sequence data associated with each sample.
North Temperate Lakes LTER: Physical Limnology of Primary Study Lakes 1981 - current
Parameters characterizing the physical limnology of the eleven primary lakes (Allequash, Big Muskellunge, Crystal, Sparkling, Trout, bog lakes 27-02 [Crystal Bog] and 12-15 [Trout Bog], Mendota, Monona, Wingra and Fish) are measured at one station in the deepest part of each lake at 0.25 m to 1 m depth intervals depending on the lake. Measured parameters in the data set include water temperature, vertical penetration of photosynthetically active radiation (PAR), dissolved oxygen in mg/L and percent saturation. Sampling Frequency: fortnightly during ice-free season - every 6 weeks during ice-covered season for the northern lakes. The southern lakes are similar except that sampling occurs monthly during the fall and typically only once during the winter (depending on ice conditions). Number of sites: 11. More information on NTL’s primary study lakes can be found at: https://portal.edirepository.org/nis/mapbrowse?scope=knb-lter-ntl&identifier=434. Please consult NTL's website (https://lter.limnology.wisc.edu) for information on experimental lake manipulations and the Wisconsin DNR's website (https://dnr.wisconsin.gov/) for management activities.
North Temperate Lakes LTER: Physical and Chemical Limnology of Lake Kegonsa and Lake Waubesa 1994 - current
Physical and chemicals parameters of two Madison-area lakes in the Yahara chain not included as core NTL-LTER study lakes. Parameters include intermittently sampled water temperature, dissolved oxygen, ph, total alkalinity, chloride and sulfate. Nutrient data has been collected since 2015. Number of sites: 2.
Data physicalization papers analysis (2019) V1
<p>Dataset containing a "report" of the reading of articles listed on <a href="http://dataphys.org/wiki/Bibliography">http://dataphys.org/wiki/Bibliography</a> with classification by human sense used in prototype/proposal.</p>
Data set to Conference Paper "The Effect of Queuing Technology on Customer Experience in Physical Retail Environments"
<p>Following an open data policy as supported by the European Union (https://www.openaire.eu/), this is the data set used for the following conference paper: Obermeier, G., Zimmermann, R., & Auinger, A. (2020, July). The Effect of Queuing Technology on Customer Experience in Physical Retail Environments. In <em>International Conference on Human-Computer Interaction</em> (pp. 141-157). Springer, Cham.</p> <p>The present work was conducted within the Innovative Training Network project PERFORM funded by the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie grant agreement No. 765395. The EU Research Executive Agency is not responsible for any use that may be made of the information it contains.</p>
Data for: Physics-based Reconstruction Methods for Magnetic Resonance Imaging
<p>Magnetic Resonance Imaging measurement data used in our paper about 'Physics-based Reconstruction Methods for Magnetic Resonance Imaging' (DOI: 10.1098/rsta.2020.0196). (In version 2 the IR-FLASH data set was replaced with one which is from the same volunteer and slice as the ME-SE data set.) </p> <p>The data is acquired from healthy volunteers and stored in the format of the BART toolbox (DOI: <a href="http://doi.org/10.5281/zenodo.592960">10.5281/zenodo.592960</a>).</p> <p>The acquisition parameters are shown in the following table:</p> <p>flip angle[◦] TR/TE/ Delta TE[ms] bandwidth [Hz/px] matrix spokes TA[s] FOV[mm] slice[mm]</p> <p>IR-FLASH 6 4.10/2.58 630 256 × 256 1020 4 192 5<br> ME-SE 90/180 2500/9.9/9.9 390 256 × 256 25 × 16 80 192 3<br> ME-FLASH 5 10.60/1.37/1.34 960 200× 200 33 × 7 0.35a 320 5<br> PC-FLASH 10 4.46/2.96 1250 210 × 210 2 × 7 15 320 5<br> fmSSFPb 15 4.5/2.25 840 192× 192 4 × 101 × 40 137 192 1</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.