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1,093 results for “scripts”
Active Foam Dynamics of Tissue Spheroid Fusion (Datasets and scripts)
<p>The file attached supporting information for the paper "Active Foam Dynamics of Tissue Spheroid Fusion". Included are data from experiments, data from simulations, and a singularity image to execute a demo simulation similarly to the ones of the paper. </p>
Fast calculation methods for the magnetic field of particle lattices: Datasets and scripts
<div>*********************************************** README.txt **************************************************</div> <div> </div> <div>Title: Fast calculation methods for the magnetic field of particle lattices: </div> <div>Datasets and scripts</div> <div>Version: 1.0</div> <div>Date of Release: 2024/10/11</div> <div>Identifier: doi:10.5281/zenodo.13930969</div> <div>Permalink: http://dx.doi.org/10.5281/zenodo.13930969</div> <div> </div> <div>*************************************************************************************************************</div> <div> </div> <div>Associated publication: I. Royo-Silvestre, D. Gandia, J. J. Beato-López, E. Garaio, C. Gómez-Polo </div> <div>"Fast calculation methods for the magnetic field of particle lattices" </div> <div>(paper yet to be published)</div> <div> </div> <div>Link to publication: (paper yet to be published)</div> <div> </div> <div>Suggested citation: Please reference the associated publication above when using any datasets or</div> <div> materials described in this README file.</div> <div> </div> <div>Contact information: Isaac Royo Silvestre, </div> <div>Universidad Pública de Navarra, </div> <div>Pamplona, Spain, </div> <div>isaac.royo@unavarra.es</div> <div> </div> <div>License: CC BY 4.0</div> <div> </div> <div>------------------------------------------------------------------------------------------------------------</div> <div> </div> <div>This directory contains the following datasets and supplementary materials:</div> <div> </div> <div> ------------------------------</div> <div> SCRIPTS</div> <div> ------------------------------</div> <div> </div> <div> - scripts.zip Matlab scripts (compressed zip file) used to calculate the magnetic field of </div> <div>lattices of magnetic particles by analytical and semianalytical methods (more information in the associated paper) </div> <div> </div> <div> --------------------------------</div> <div> DATASETS</div> <div> --------------------------------</div> <div> </div> <div> - data.zip: Tabular data required to plot curves (compressed zip file) in csv format,</div> <div>also data used to obtain average values</div> <div> </div> <div> </div> <div>Specific documentation of each file is described in readme files.</div> <div> </div> <div>Refer to the original manuscript (see above) for additional information regarding the collection and generation of these data.</div> <div> </div> <div>------------------------------------------------------------------------------------------------------------</div> <div> </div> <div> ---------------------------------------------------------------------</div> <div> DOCUMENTATION FOR 'scripts.zip'</div> <div> ---------------------------------------------------------------------</div> <div> </div> <div> The zip file contains another readme.txt file (that explains the content of the zip file in detail), </div> <div>and multiple .m files. m files are Matlab scripts, text files that can be read using any text editor. However it has to be executed via Matlab, scripts contain documentation as comments.</div> <div> </div> <div> ---------------------------------------------------------------</div> <div> DOCUMENTATION FOR 'data.zip'</div> <div> ---------------------------------------------------------------</div> <div> </div> <div> The zip file contains another readme.txt file (that explains the content of the zip file in detail), </div> <div>multiple .dat files with data used to obtain averaged valus (see format in the readme.txt </div> <div>contained in the zip), and a folder "curves".</div> <div>The curves folder contains tabular data in .csv files, these files can be used to plot the curves</div> <div>in the manuscript.</div> <p> </p>
Van Dijk et al. (2021), A meta-analysis of projected global food demand and population at risk of hunger for the period 2010–2050, data and scripts
<p>This repository contains all data and R scripts to reproduce the figures in Van Dijk et al. (2021), A meta-analysis of global food demand and population at risk of hunger projections for the period 2010-2050, Nature Food. More specifically, it includes two databases: (1) A database with standardized information to describe the characteristics of 57 studies that were identified by the systematic literature review and (2) The Global Food Security Projections Database v1.0.1 with harmonized projections for three global food security indicators: food consumption in kcal per capita and total kcal, and population at risk of hunger. The database also includes projections for total global population that are required to derive the global food security indicators.</p> <p>The two scripts (nf_figures.r and nf_meta_regression.r) can be used to reproduce the figures and tables in the main paper and the supplementary information. Please start with the first script, which sources the second script. </p> <p>This is the first version of the Global Food Projections Database. We expect to update the data, including additional studies and variables in the future. For issues and suggestions, please contact michiel.vandijk@wur.nl.</p> <p> </p>
Data and R-scripts for "Land-use trajectories for sustainable land system transformations: identifying leverage points in a global biodiversity hotspot" (V2)
<p>Sustainable land system transformations are necessary to avert biodiversity and climate collapse. However, it remains unclear where entry points for transformations exist in complex land systems. Here, we conceptualize land systems along land-use trajectories, which allows us to identify and evaluate leverage points; i.e., entry points on the trajectory where targeted interventions have particular leverage to influence land-use decisions. We apply this framework in the biodiversity hotspot Madagascar. In the Northeast, smallholder agriculture results in a land-use trajectory originating in old-growth forests, spanning forest fragments, and reaching shifting hill rice cultivation and vanilla agroforests. Integrating interdisciplinary empirical data on seven taxa, five ecosystem services, and three measures of agricultural productivity, we assess trade-offs and co-benefits of land-use decisions at three leverage points along the trajectory. These trade-offs and co-benefits differ between leverage points: two leverage points are situated at the conversion of old-growth forests and forest fragments to shifting cultivation and agroforestry, resulting in considerable trade-offs, especially between endemic biodiversity and agricultural productivity. Here, interventions enabling smallholders to conserve forests are necessary. This is urgent since ongoing forest loss threatens to eliminate these leverage points due to path-dependency. The third leverage point allows for the restoration of land under shifting cultivation through vanilla agroforests and offers co-benefits between restoration goals and agricultural productivity. The co-occurring leverage points highlight that conservation and restoration are simultaneously necessary. Methodologically, the framework shows how leverage points can be identified, evaluated, and harnessed for land system transformations under the consideration of path-dependency along trajectories.</p>
Model Output and Figure Scripts for: "Uncertainty in reconstructing paleo-elevation of the Antarctic Ice Sheet from temperature-sensitive ice core records"
<p>New climate model output and figure scripts for the paper "Uncertainty in reconstructing paleo-elevation of the Antarctic Ice Sheet from temperature-sensitive ice core records".</p>
Harmfull algae bloom monitoring program dataset; ERDDAP, ERA5 and ONI datasets; and R script for multicriteria analisys in Santa Catarina coastal zone, Brazil.
<p>Project Harmful Algae Bloom (HAB) Monitoring Network in Santa Catarina, Brazil - Database and R script with data analysis. This project was funded by the Foundation for Research Support of the State of Santa Catarina – FAPESC and generated a database combining a HAB monitoring dataset with oceanographic (from ERDDAP) and climatic (from ERA5 and ONI) data which was submitted to multicriteria analysis using R. The HAB monitoring dataset was obtained from Cidasc/SC State Government (http://www.cidasc.sc.gov.br/defesasanitariaanimal/monitoramento-de-algas-nocivas/) and contains results of phytoplankton counts in water samples and toxin levels in shellfish samples obtained from 39 points located in shellfish farms distributed along the SC coastline. Oceanographic data were obtained from the ERDDAP/NOAA website (https://coastwatch.pfeg.noaa.gov/erddap/index.html), including the variables mean chlorophyll concentration (mg.m-3) and mean sea surface temperature (ºC); Climate data were obtained from Copernicus/ERA5 (https://cds.climate.copernicus.eu/) including the variables mean air temperature (ºC), mean pressure (Pasc.), mean cloud cover (%), mean precipitation (kg.m-2), radiation (Einsteins.m-2.day-1), mean U wind (m.s-1), and mean V wind (m.s-1).; Oceanic Niño Index (ONI) data were obtained from the NOAA website (https://origin.cpc.ncep.noaa.gov/products/analysis_monitoring/ensostuff/ONI_v5.php); The R script involves a pre-processing routine aimed at summarizing and integrating all datasets and the subsequent data analyses carried out to evidence temporal patterns related to different type of algal blooms. Detailed methods will be provided in a scientific article.</p>
Atmospheric clumped O2 isotope composition simulation data and analysis scripts from EMAC/aMC models
<p>This publication contains source code, data and analysis scripts/results of the simulations presented in the following manuscript:</p> <blockquote> <p>Laskar, A.H., G.A. Adnew, S.S. Gromov, R. Peethambaran, B. Steil, J. Lelieveld, T. Blunier and T. Röckmann (2022). "Large variations in atmospheric oxidants and temperature during the Holocene" (in review)</p> </blockquote> <p> </p> <p><strong>EMAC simulations analysis</strong></p> <p>The analysis contains integrals of species burdens and other atmospheric physicochemical parameters obtained with the clumped isotopes of oxygen (CIO)-enabled ECHAM/MESSy Atmospheric Chemistry model (EMAC, see <a href="https://www.messy-interface.org">MESSy consortium website</a> for more information) model in various climate states. Simulations were performed in 2021–2022 at the <a href="https://www.dkrz.de">German Climate Computing Centre</a> (DKRZ) with the support of the <a href="https://www.palmod.de">PalMod project</a>.</p> <p>Analysis data is stored in human/machine-readable file <code>D36-EMAC-analysis.dat</code>, please refer to its header for variables description, etc.</p> <p>Additional (to those presented in the manuscript) analysis plots from EMAC data analysis are available in <code>D36-EMAC-analysis.vsz</code> (see the hardcopy in <code>D36-EMAC-analysis.pdf</code>) prepared using the <a href="https://veusz.github.io">Veusz</a> software.</p> <p> </p> <p><strong>2BM/MC (two-box Monte-Carlo) model code, simulation data and analysis</strong></p> <p>2BM/MC code/simulation setup is implemented within the advanced Monte-Carlo framework (aMC) and is available in the <a href="https://gitlab.com/sergey.gromov/amc/-/tree/vpCIO">respective repository</a>. A copy of the source code used to perform simulations is provided here (see <code>aMC-vpCIO.tar.gz</code> archive).</p> <p>2BM/MC output is stored in the <a href="https://www.unidata.ucar.edu/software/netcdf/">netCDF format</a> (ver. 4) and can be read in by any compatible software. The output contains probe statistics (reference <em>probed</em> distributions of the variables) in <code>vpCIO-probe_stat-*.nc</code> and resulting statistics (distributions <em>matching</em> given criteria, i.e. changes to the Δ36 signature vs. PD conditions) in <code>vpCIO-delta-*.nc</code> files, respectively.</p> <p>We use <a href="https://ferret.pmel.noaa.gov">NOAA Ferret</a> software to derive additional statistics of the third parameter (viz. average STE (<em>S</em>) changes) over the obtained 2D frequency histograms of other parameters (viz. changes to equilibration rate (<em>Req)</em> and temperature (<em>Teq</em>)). The scripts exemplifying this calculation are presented in <code>D36-vpCIO-analysis__proc*</code> files, which output results/overview plots in <code>vpCIO-delta-*__proc.nc</code> and <code>vpCIO-delta-*.gif</code> files.</p> <p>The analysis of the 2BM/MC simulation is available in <code>D36-vpCIO-analysis.vsz</code> script (see the hardcopy in <code>D36-vpCIO-analysis.pdf</code>) prepared using the <a href="https://veusz.github.io">Veusz</a> software. Note that some plots require the abovementioned third-parameter statistics as input.</p> <p><strong>Performing simulations with 2BM/MC</strong></p> <p>In order to perform simulations (e.g. with altered parameters), please follow the <a href="https://gitlab.com/sergey.gromov/amc/-/tree/vpCIO#integrating-your-code-building-executing">respective guide</a> for and build the <code>aMC-vpCIO</code> model. A typical sequence of shell commands to build and run 2BM/MC (which is referred to as <code>vpCIO</code> generic model within the <code>aMC</code>) is:</p> <pre><code># clone the distribution and check-out `vpCIO` branch or particular commit referenced in the repository history [user@pc]/~> git clone https://gitlab.com/sergey.gromov/amc.git [user@pc]/~> cd amc [user@pc]/~/amc> git checkout vpCIO # or unpack the source code available in this publication: [user@pc]/~> tar -xvf `aMC-vpCIO.tar.gz` [user@pc]/~> cd amc # build the aMC/vpCIO model executable # (note that you need at least a GCC or Intel compiler suite and respective netCDF v.4 library Fortran interface available in your environment): [user@pc]/~/amc> make vpCIO # adjust model setup (see the `vpCIO/amc.nml` namelist) ... # perform simulation [user@pc]/~/amc> cd vpCIO [user@pc]/~/amc/vpCIO> ./xamc # calculate additional statistics/produce overview with NOAA Ferret: [user@pc]/~/amc/vpCIO> ferret -gif -script D36-vpCIO-analysis__proc.jnl MH [user@pc]/~/amc/vpCIO> ./D36-vpCIO-analysis__proc</code></pre> <p>Note that output files contain the build timestamp and repository commit hash for the code used in the simulation, e.g.:</p> <pre><code>[user@pc]/~/amc/vpCIO> ncdump -h ./vpCIO-delta-dMH.nc | grep 'build' :build = "vpCIO@https://gitlab.com/sergey.gromov/amc__aMC_v1.9-110-g2566229@2022-12-09T16:43:12+01:00__built@2022-12-09T16:48:03+01:00__<user>@<email.com>" ;</code></pre> <p> </p> <p>Please contact Sergey Gromov ( sergey.gromov (at) mpic.de ) for additional information and access to the original experiment data.</p> <p> </p>
Datasets and analysis scripts for air-sea flux study using CESM-MOM6
<p>This repository provides the fully-coupled CESM-MOM6 simulation datasets for the ocean surface and the analysis scripts for studying air-sea flux variability. This study aimed to quantify the effects of the stochastic ocean density corrections on the ocean-intrinsic component of air-sea fluctuations, which is the strongest at mesoscales, i.e., 10-1000 Km. </p>
Development of a machine learning model for river bedload - Data, Model, and Scripts
<p>This repository for “Development of a machine learning model for river bedload” Hosseiny et. Al (in review at Earth Surface Dynamics) contains the following assets. These assets may need to be modified for your purposes. You are responsible for inspecting these assets and making adjustments as necessary.</p> <p>Assets:</p> <p>1) The trained ANN model described in Hosseiny et al. (in review) as a .zip file named ‘Hosseiny_et_al_trained_ANN.zip’. This contains a folder (BEDLOAD_MODEL_FINAL) which contains the trained ANN Model (saved_model.pb) and associated information related to the input variables and variable weights.</p> <p>2) An accompanying Jupyter notebook named “bedload_ann_example.ipynb” that provides a step-by-step guide for implemented the trained ANN model (Asset 1).</p> <p>3) A .xls file named “Hosseiny et al_Supplemental_Data_Tables.xlsx” which provides the original observations that the model was trained and tested on, the summary statistics of the original input data as a compilation and for individual sites, the model errors associated with training and validation steps, the bedload calculations from the four uncalibrated existing bedload transport models described in the original study and for the ANN for the test data population, associated summary statistics with model output, and additional site-specific calculations of model error.</p>
Supplementary material: Burial Analysis on the Middle Bronze Age in the Carpathian Basin (dataset and scripts)
<p>This is the supplementary material of the paper "Wealth Consumption, Sociopolitical Organization, and Change: A Perspective from Burial Analysis on the Middle Bronze Age in the Carpathian Basin" (accessible over doi: https://doi.org/10.1515/opar-2022-0281). Please consult the publication for in depth description of the data, its context and for the method applied on the data, as well as references to primary sources. The data tables comprise the burial data of the Hungarian Middle Bronze Age cemeteries of Dunaújváros-Duna-dűlő, Dömsöd, Adony, Lovasberény, Csanytelek-Palé, Kelebia, Hernádkak, Gelej, Pusztaszikszó and Streda nad Bodrogom. The script "supplementary_material_2_wealth_index_calculation.py" provides the calculation of a wealth index, based on grave goods, for the provided data. The script "supplementary_material_3_population_estimation.py" models the living population of Dunaújváros-Duna-dűlő. Both can be run by double-click. Requirements to be installed to run the scripts: Python 3 (https://www.python.org/) with the packages numpy (https://numpy.org/), pandas (https://pandas.pydata.org/), matplotlib (https://matplotlib.org/), seaborn (https://seaborn.pydata.org/) and scipy (https://scipy.org/); all included in Ancaonda (Python-Distribution, https://www.anaconda.com/).</p>
Data and scripts for reproducing "Optimisation and Analysis of Streamwise-Varying Wall-Normal Blowing in a Turbulent Boundary Layer"
<p>This is the accompanying data and Python scripts to reproduce the figures in "Optimisation and Analysis of Streamwise-Varying Wall-Normal Blowing in a Turbulent Boundary Layer", submitted to Flow, Turbulence and Combustion.</p>
Data, scripts, and figures of the article: The effect of oregano essential oils on Feed Passage Syndrome in broilers: 2. Assessment under a challenge model
<p>This data set contains the data, JMP scripts, and figures of the article titled "The effect of oregano essential oil on Feed Passage Syndrome in broilers: 2. Assessment under a challenge model" to be published in the journal Animal - Open Space.</p>
Data, scripts, and figures of the article: The effect of oregano essential oils on Feed Passage Syndrome in broilers: 1. Assessment under field conditions
<p>This data set contains the data, JMP scripts, and figures of the article titled "The effect of oregano essential oils on Feed Passage Syndrome in broilers: 1. Assessment under field conditions" to be published in the journal Animal - Open Space.</p>
openENTRANCE - Case Study 1 - Residential Demand Response - Data and Scripts
<p>Data files and Python and R scripts are provided for Case Study 1 of the openENTRANCE project. The data covers 10 residential devices on the NUTS2 level for the EU27 + UK +TR + NO + CH from 2020-2050. The devices included are full battery electric vehicles (EV), storage heater (SH), water heater with storage capabilitites (WH), air conditiong (AC), heat circulation pump (CP), air-to-air heat pump (HP), refrigeration (includes refrigerators (RF) and freezers (FR)), dish washer (DW), washing machine (WM), and tumble drier (TD). The data for the study uses represenative hours to describe load expectations and constraints for each residential device - hourly granularity from 2020 to 2050 for a representative day for each month (i.e. 24 hours for an average day in each month).</p> <p>The aggregated final results are in Full_potential.V9.csv and acheivable_NUTS2_summary.csv. The file metaData.Full_Potential.csv is provided to guide users on the nomenclature in Full_potential.V9.csv and the disaggregated data sets.The disaggregated loads can be found in d_ACV8.csv, d_CPV6.csv, d_DWV6.csv, d_EVV7.csv, d_FRV5.csv, d_HPV4.csv, d_RFV5.csv, d_SHV7.csv, d_TDV6.csv, d_WHV7.csv, d_WMV6.csv while the disaggregated maximum capacities p_ACV8.csv, p_CPV6.csv, p_DWV6.csv, p_EVV7.csv, p_FRV5.csv, p_HPV4.csv, p_RFV5.csv, p_SHV7.csv, p_TDV6.csv, p_WHV7.csv, p_WMV6.csv. </p> <p>Full_potential.V9.csv shows the NUTS2 level unadjusted loads for the residential devices using representative hours from 2020-2050. The loads provided here have not been adjusted with the direct load participation rates (see paper for more details). More details on the dataset can be found in the metaData.Full_Potential.csv file.</p> <p>The acheivable_NUTS2_summary.csv shows the NUTS2 level acheivable direct load control potentials for the average hour in the respective year (years - 2020, 2022,2030,2040, 2050). These summaries have allready adjusted the disaggregated loads with direct load participation rates from participation_rates_country.csv.</p> <p>A detailed overview of the data files are provided below. Where possible, a brief description, input data, and script use to generate the data is provided. If questions arise, first refer to the publication. If something still needs clarification, send an email to ryano18@vt.edu.</p> <p><strong>Description of data provided</strong></p> <ol> <li>Achievable_NUTS2_summary.csv <ol> <li>Description <ol> <li>Average hourly achievable direct load potentials for each NUTS2 region and device for 2020, 2022, 2030,2040, 2050</li> </ol> </li> <li>Data input <ol> <li>Full_potential.V9.csv</li> <li>participation_rates_country.csv</li> <li>P_inc_SH.csv</li> <li>P_inc_WH.csv</li> <li>P_inc_HP.csv</li> <li>P_inc_DW.csv</li> <li>P_inc_WM.csv</li> <li>P_inc_TD.csv</li> </ol> </li> <li>Script <ol> <li>NUTS2_acheivable.R</li> </ol> </li> </ol> </li> <li>COP_.1deg_11-21_V1.csv <ol> <li>Description <ol> <li>NUTS2 average coefficient of performance estimates from 2011-2021 daily temperature</li> </ol> </li> <li>Data <ol> <li>tg_ens_mean_0.1deg_reg_2011-2021_v24.0e.nc</li> <li>NUTS_RG_01M_2021_3857.shp</li> <li>nhhV2.csv</li> </ol> </li> <li>Script <ol> <li>COP_from_E-OBS.R</li> </ol> </li> </ol> </li> <li>Country dd projections.csv <ol> <li>Description <ol> <li>Assumptions for annual change in CDD and HDD</li> <li>Spinoni, J., Vogt, J. V., Barbosa, P., Dosio, A., McCormick, N., Bigano, A., & Füssel, H. M. (2018). Changes of heating and cooling degree‐days in Europe from 1981 to 2100. International Journal of Climatology, 38, e191-e208.</li> <li>Expectations for future HDD and CDD used the long-run averages and country level expected changes in the rcp45 scenario</li> </ol> </li> </ol> </li> <li>EV NUTS projectionsV5.csv <ol> <li>Description <ol> <li>NUTS2 level EV projections 2018-2050</li> </ol> </li> <li>Data input <ol> <li>EV projectionsV5_ave.csv <ol> <li>Country level EV projections</li> </ol> </li> <li>NUTS 2 regional share of national vehicle fleet <ol> <li>Eurostat - Vehicle Nuts.xlsx</li> </ol> </li> </ol> </li> <li>Script <ol> <li>EVprojections_NUTS_V5.py</li> </ol> </li> </ol> </li> <li>EV_NVF_EV_path.xlsx <ol> <li>Description <ol> <li>Country level – EV share of new passenger vehicle fleet</li> <li>From: Mathieu, L., & Poliscanova, J. (2020). Mission (almost) accomplished. <em>Carmakers’ Race to Meet the</em>, <em>21</em>.</li> </ol> </li> </ol> </li> <li>EV_parameters.xlsx <ol> <li>Description <ol> <li>Parameters used to calculate future loads from EVs</li> <li>Wunit_EV – represents annual kWh per EV</li> <li>evLIFE_150kkm <ol> <li>number of years</li> <li>represents usable life if EV only lasted 150 thousand km. Hence, 150,000/average km traveled per year with respect to country (this variable is dropped and not used for estimation).</li> </ol> </li> <li>Average age/#years assuming 150k life – represents <ol> <li>Number of years</li> <li>Average between evLIFE_150kkm and average age of vehicle with respect to the country</li> </ol> </li> </ol> </li> </ol> </li> <li>full_potentialV9.csv <ol> <li>Description <ol> <li>Final data that shows hourly demand (Maximum Reduction) and (Maximum Dispatch for each device, region, and year. <ol> <li>This data has not been adjusted with participation_rates_country.csv</li> <li>Maximum dispatch is equal to max capacity – hourly demand with respect to the device, region, year, and hour.</li> </ol> </li> </ol> </li> <li>Script <ol> <li>Full_potentialV9.py</li> </ol> </li> </ol> </li> <li>gils projection assumptions.xlsx <ol> <li>Description <ol> <li>Data from: Gils, H. C. (2015). Balancing of intermittent renewable power generation by demand response and thermal energy storage.</li> <li>A linear extrapolation was used to determine values for every year and country 2020-2050. AC – Air Conditioning, SH – Storage Heater, WH – Water heater with storage capability, CP – heat circulation pump, TD – Tumble Drier, WM – Washing Machine, DW -Dish Washer, FR – Freezer, RF – Refrigerator. The results are in the files shown below. <ol> <li>nflh – full load hours <ol> <li>nflh_ac.csv</li> <li>nflh_cp.csv</li> </ol> </li> <li>wunit – annual energy consumption <ol> <li>Wunit_rf_fr.csv</li> </ol> </li> <li>Pcycle – power demand per cycle <ol> <li>Pcycle_wm.csv</li> <li>Pcycle_dw.csv</li> <li>Pcycle_td.csv</li> </ol> </li> <li>Punit – power damand for device <ol> <li>Punit_ac.csv</li> <li>Punit_cp.csv</li> </ol> </li> <li>r – country level household ownership rates of residential device <ol> <li>rfr.csv</li> <li>rrf.csv</li> <li>rwm.csv</li> <li>rtd.csv</li> <li>rdw.csv</li> <li>rac.csv</li> <li>rwh.csv</li> <li>rcp.csv</li> <li>rsh.csv</li> </ol> </li> <li>Script <ol> <li>openENTRANCE projections.py</li> </ol> </li> </ol> </li> </ol> </li> </ol> </li> <li>heat_pump_hourly_share.csv <ol> <li>Description <ol> <li>Hours share of daily energy demand</li> <li>From ENTROS TYNDP – Charts and Figures <ol> <li><a href="https://2020.entsos-tyndp-scenarios.eu/download-data/#download">https://2020.entsos-tyndp-scenarios.eu/download-data/#download</a></li> </ol> </li> </ol> </li> </ol> </li> <li>hourlyEVshares.csv <ol> <li>Description <ol> <li>Hours share of daily energy demand</li> <li>From My Electric Avenue Study <ol> <li><a href="https://eatechnology.com/consultancy-insights/my-electric-avenue/">https://eatechnology.com/consultancy-insights/my-electric-avenue/</a></li> </ol> </li> </ol> </li> </ol> </li> <li>HP_transitionV2.csv <ol> <li>Description <ol> <li>Used to create Qhp_thermal_MWh_projectedV2.csv</li> <li>Final_energy_15-19 <ol> <li>Average final energy demand for the residential heating sector between 2015-2019</li> </ol> </li> <li>Final_energy_15-19_nonEE <ol> <li>Average final energy demand for the residential heating sector for energy sources that are not energy efficient between 2015-2019 (see paper for sources)</li> </ol> </li> <li>Final_energy_15-19_nonEE_share <ol> <li>share of inefficient heating sources</li> </ol> </li> <li>HP_thermal_2018 <ol> <li>Thermal energy provided by residential heat pumps in 2018</li> </ol> </li> <li>HP_thermal_2019 <ol> <li>Thermal energy provided by residential heat pumps in 2019</li> </ol> </li> <li>See publication for data sources</li> </ol> </li> </ol> </li> <li>Nflh_ac.csv, nflh_cp.csv <ol> <li>See gils projection assumptions.xlsx</li> </ol> </li> <li>nhhV2 <ol> <li>Description <ol> <li>Expected number of households for NUTS2 regions for 2020-2050</li> <li>See publication for data sources</li> </ol> </li> <li>Script <ol> <li>EUROSTAT_POP2NUTSV2.R</li> </ol> </li> </ol> </li> <li>NUTS0_thermal_heat_annum.csv <ol> <li>Description <ol> <li>Country level residential annual thermal heat requirements in kWh</li> <li>Used to determine maximum dispatch in openENTRANCE final V14.py</li> <li>Mantzos, L., Wiesenthal, T., Matei, N. A., Tchung-Ming, S., Rozsai, M., Russ, P., & Ramirez, A. S. (2017). <em>JRC-IDEES: Integrated Database of the European Energy Sector: Methodological Note</em> (No. JRC108244). Joint Research Centre (Seville site).</li> </ol> </li> </ol> </li> <li>p_ACV8.csv, p_CPV6.csv, p_DWV6.csv, p_EVV7.csv, p_FRV5.csv, p_HPV4.csv, p_RFV5.csv, p_SHV7.csv, p_TDV6.csv, p_WHV7.csv, p_WMV6.csv <ol> <li>Description <ol> <li>Maximum capacity – load for a device can never exceed maximum capacity</li> </ol> </li> <li>Data <ol> <li>gils projection assumptions.xlsx</li> </ol> </li> <li>Script <ol> <li>openENTRANCE final V14.py</li> </ol> </li> </ol> </li> <li>P_inc_DW.csv, P_inc_HP.csv, P_inc_SH.csv, P_inc_TD.csv, P_inc_WH.csv, P_inc_WM.csv, SAMPLE_PINC.csv <ol> <li>Description <ol> <li>Unadjusted average hourly potential for increase by NUTS2 region for 2018-2050</li> </ol> </li> <li>Data <ol> <li>d_ACV8.csv, d_CPV6.csv, d_DWV6.csv, d_EVV7.csv, d_FRV5.csv, d_HPV4.csv, d_RFV5.csv, d_SHV7.csv, d_TDV6.csv, d_WHV7.csv, d_WMV6.csv <ol> <li>Theoretical maximum reduction / load of the respective device</li> </ol> </li> <li>p_ACV8.csv, p_CPV6.csv, p_DWV6.csv, p_EVV7.csv, p_FRV5.csv, p_HPV4.csv, p_RFV5.csv, p_SHV7.csv, p_TDV6.csv, p_WHV7.csv, p_WMV6.csv <ol> <li>Maximum capacity</li> </ol> </li> </ol> </li> <li>Script <ol> <li>P_increaseV2.py</li> </ol> </li> </ol> </li> <li>Pcycle_dw.csv, Pcycle_td.csv, Pcycle_wm.csv <ol> <li>Description <ol> <li>power demand per cycle kWh</li> <li>See gils projection assumptions.xlsx</li> </ol> </li> </ol> </li> <li>Punit_ac.csv, Punit_cp.csv <ol> <li>Description <ol> <li>Unit capacities kWh</li> <li>See gils projection assumptions.xlsx</li> </ol> </li> </ol> </li> <li>Qhp_thermal_MWh_projectedV2.csv <ol> <li>Description <ol> <li>NUTS2 expectations for thermal energy demand met by heat pumps for 2022-2050</li> <li>Assumes a linear decomposition of non-renewable and non-energy efficient heating sources until 2050</li> </ol> </li> <li>Data <ol> <li>HP_transitionV2.csv</li> <li>nhhV2.csv</li> </ol> </li> <li>Script <ol> <li>HP_projection_nuts.py</li> </ol> </li> </ol> </li> <li>rac.csv, rcp.csv, rdw.csv, rfr.csv, rrf.csv, rsh.csv, rtd.csv, rwh.csv, rwm.csv <ol> <li>Description <ol> <li>Household ownership rates</li> <li>See gils projection assumptions.xlsx</li> </ol> </li> </ol> </li> <li>s_hdd nutsV3.csv, s_cdd nutsV3.csv, yr_hdd nutsV3.csv, yr_cdd nutsV3.csv <ol> <li>Description <ol> <li>s_hdd nutsV3.csv and s_cdd nutsV3.csv – months share of total heating and cooling degree days (yr_hdd and yr_cdd respectively)</li> <li>yr_hdd nutsV3.csv and yr_cdd nutsV3.csv – annual heating and cooling degree days respectively</li> <li>long run (2011-2021) average NUTS 2 level hdd and cdd</li> </ol> </li> </ol> </li> <li>s_wash nuts_V2.csv <ol> <li>Description <ol> <li>Hours share of daily energy demand for washing machine, tumble drier, and dishwasher</li> </ol> </li> <li>Data <ol> <li>stamminger_V2.xlsx</li> </ol> </li> <li>Script <ol> <li>S_wash_nuts_V2.py</li> </ol> </li> </ol> </li> <li>Stamminger_2009.csv <ol> <li>Description <ol> <li>Hours share of daily energy demand for water heater – WH, storage heater – SH, air conditioner AC, heat circulation pump – CP</li> <li>From Stamminger, R. (2009). Synergy potential of smart domestic appliances in renewable energy systems.</li> </ol> </li> </ol> </li> <li>Time_index.csv <ol> <li>Used to create the appropriate timestamp for representative hours</li> </ol> </li> <li>Wunit_rf_fr.csv <ol> <li>Annual energy consumption for refrigeration and freezers</li> <li>See gils projection assumptions.xlsx</li> </ol> </li> </ol>
Network data and script accompanying the paper "Operationalizing anthropological theory: four techniques to simplify networks of co-occurring ethnographic codes"
<p>This repository accompanies the paper<a href="https://rdcu.be/dbuhi"> "Operationalizing anthropological theory: four techniques to simplify networks of co-occurring ethnographic codes"</a>, by Cottica et al. It contains:</p> <ol> <li>A data file, containing networks of co-occurrence of ethnographic codes from three ethnographies. Data are pseudonymized (see the paper for details).</li> <li>A script that, when run on the data, produces simplified versions of each network. Simplifications follow four different techniques, described in the paper. Each technique relies on a tuning parameter, so that, for each network and each techniques, the script produces several simplified networks, each one associated with a unique value of the tuning parameter.</li> </ol> <p>The data file format is that of a Tulip perspective. To open, download Tulip (https://tulip.labri.fr), launch it and open the file from within the Tulip GUI.</p> <p>The script file is in Python. To run, open it from within the Tulip IDE first.</p> <p> </p>
Data and scripts to reproduce the results shown in "Stability of attractor local dimension estimates in non-Axiom A dynamical systems"
<p>Here we make available all the codes and datasets to reproduce the results of the paper "Stability of attractor local dimension estimates in non-Axiom A dynamical systems" by Flavio Pons, Gabriele Messori and Davide Faranda.</p> <p>The pre-print of the article is available at https://hal.science/hal-04051659/document.</p> <p>Any question/comment can be sent to flavio.pons@gmail.com.</p> <p>License for the codes and simulation/analysis results (*.Rda files): the code is shared under the Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) license, see https://creativecommons.org/licenses/by-nc-sa/4.0/</p> <p>License and terms of use for the ERA5 data (z500_daily_euro.nc): the ERA5 500 hPa geopotential was downloaded from https://climexp.knmi.nl/start.cgi</p>
Data and R scripts for KCC plots in Douville and Willett (2023)
<p>CMIP6 data (historical and scenario SSP5-8.5, run 1 only), observation and R scripts to plot Fig.1 and Fig.2 of Douville and Willett (Sc. Adv., 2023)</p>
Data and scripts for reproducing "Quantifying Uncertainties in Direct Numerical Simulations of a Turbulent Channel Flow"
<p>This is the accompanying data and Python scripts to reproduce the figures in "Quantifying Uncertainties in Direct Numerical Simulations of a Turbulent Channel Flow", currently under review.</p>
Data and Scripts for the paper "Evidence on the Impact of the Prudential Center on Crime in Downtown Newark"
<p>This repository contains the data and R scripts utilized to perform the analyses in the paper entitled "Evidence on the Impact of the Prudential Center on crime in downtown Newark", co-authored by Gian Maria Campedelli, Eric Piza, Alex Piquero, and Justin Kurland. The article has been published in the Journal of Experimental Criminology and can be read at: https://link.springer.com/article/10.1007/s11292-023-09576-8 (open access).</p> <p>The newer version of the current repository (v2) includes the appendix file to the main text (named supplementary.docx) which was excluded by the online publication due to errors made by the Springer editorial office. We have uploaded the appendix here to avoid issuing an erratum to the article. </p>
The role of the intraspecific variability of hydraulic traits for modelling the plant water use in different European forest ecosystems: scripts, model output, and parameter files
<p>This repository contains the model outputs and R scripts used to process the data to analyze the impact of the plant hydraulic parameterization of the manuscript: "The role of the intraspecific variability of hydraulic traits for modelling the plant water use in different European forest ecosystems". The following is a detailed description of the content of this repository:</p> <p>model_output.zip: This compressed file contains the results of all the individual numerical experiments per experimental site as produced by the Comunity Land Model version 5. The files are stored in NETCDF format per year. The folder is arranged with subfolders containing the individual results from each experimental site as follows:</p> <ul> <li>rc: model output with the results of the resistant configuration of experiment 1 (RC)</li> <li>vc: model output with the results of the vulnerable configuration of experiment 1 (VC)</li> <li>k_dc: model output with the results of the default configuration used for experiments 1 and 2 (DC or DC<em>k</em><sub>max</sub>)</li> <li>k_rc: model output with the results of the low plant hydraulic conductance (L<em>k</em><sub>max</sub>) for experiment 2</li> <li>k_irc: model output with the results of the intermediate low plant hydraulic conductance (IL<em>k</em><sub>max</sub>) for experiment 2</li> <li>k_vc: model output with the results of the high plant hydraulic conductance (H<em>k</em><sub>max</sub>) for experiment 2</li> <li>k_ivc: model output with the results of the intermediate high plant hydraulic conductance (IH<em>k</em><sub>max</sub>) for experiment 2</li> <li>k_iirc: model output with the results of the additional intermediate low plant hydraulic conductance (IIL<em>k</em><sub>max</sub>) for experiment 2</li> <li>ko_dc: model output with the results of the best <em>k</em><sub>max</sub> and the default configuration of the PVC used in experiment 3</li> <li>ko_rc: model output with the results of the best <em>k</em><sub>max</sub> and the resistant configuration of the PVC used in experiment 3</li> <li>ko_vc: model output with the results of the best <em>k</em><sub>max</sub> and the vulnerable configuration of the PVC used in experiment 3</li> </ul> <p>The scripts were written for use in RStudio, and each contains a detailed description of the data requirements and outputs. Each script was developed to read directly the netcdf files of the model output and the csv files containing the transpiration estimates calculated from the SAPFLUXNET per experimental site (script 1).</p>
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.