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106 results for “signal evolution”
Signal evolution and morphological complexity in hummingbirds (Aves: Trochilidae)
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Data from: Evolution of Acoustic and Visual Signals in Asian Barbets
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Data from: Ecology and signal structure drive the evolution of synchronous displays
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Data from: Conspicuous signal evolution in heterogeneous environments
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Data from: Bacteria and the evolution of honest signals. The case of ornamental throat feathers in spotless starlings
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Data from: Receiver discriminability drives the evolution of complex sexual signals by sexual selection
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Data from: Clock gene evolution: seasonal timing, phylogenetic signal, or functional constraint?
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Code for: Threshold assessment, categorical perception, and the evolution of reliable signaling
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Evolution of species recognition when ecology and sexual selection favor signal stasis
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Urbilaterian origin and evolution of sNPF-type neuropeptide signalling
<p>Physiology and behaviour are controlled by neuropeptide signalling systems comprising peptide ligands and cognate receptors. Molecular phylogenetics combined with experimental identification of neuropeptide-receptor pairs has revealed that many neuropeptide signalling systems originated in the urbilaterian common ancestor of protostomes and deuterostomes. Neuropeptide-Y/neuropeptide-F (NPY/NPF)-type signalling is one such example, whereas NPY/NPF-related short-NPF (sNPF)-type signalling has hitherto only been identified in protostomes. Here we report the discovery of a neuropeptide (pQDRSKAMQAERTGQLRRLNPRF-NH<sub>2</sub>) that is the ligand for an sNPF-type receptor in a deuterostome, the starfish <em>Asterias rubens</em> (Phylum Echinodermata). Informed by phylogenetic analysis of sequence data, we conclude that the paralogous NPY/NPF-type and sNPF-type signalling systems originated in Urbilateria but NPY/NPF-type signalling was lost in echinoderms. Furthermore, we present evidence that sNPF-type peptides are orthologs of vertebrate prolactin-releasing peptides. Our findings demonstrate the importance of experimental studies on echinoderms for reconstructing the evolutionary history of neuropeptide signalling systems.</p>
Data from: Genomic signatures of GPCR expansions reveal functional transitions in the evolution of cephalopod signal transduction
Coleoid cephalopods show unique morphological and neural novelties, such as arms with tactile and chemosensory suckers and a large complex nervous system. The evolution of such cephalopod novelties has been attributed at a genomic level to independent gene family expansions, yet the exact association and the evolutionary timing remain unclear. In the octopus genome, one such expansion occurred in the G-protein coupled receptors (GPCRs) repertoire, a superfamily of proteins that mediate signal transduction. Here we assessed the evolutionary history of this expansion and its relationship with cephalopod novelties. Using phylogenetic analyses, two cephalopod- and two octopus-specific GPCR expansions were identified. Signatures of positive selection were analysed within the four groups, and the locations of these sequences in the Octopus bimaculoides genome were inspected. Additionally, the expression profiles of octopus GPCRs across various tissues were extracted from available transcriptomic data. Our results reveal the evolutionary history of cephalopod GPCRs. Unexpanded cephalopod GPCRs shared with other bilaterians were found to be mainly nervous tissue-specific. In contrast, duplications that are shared between octopus and the bobtail squid or specific to the octopus' lineage generated copies with divergent expression patterns devoted to tissues outside of the brain. The acquisition of novel expression domains was accompanied by gene order rearrangement either through translocation or duplication and gene loss. Lastly, expansions showed signs of positive selection and some were found to form tandem clusters with shared conserved expression profiles in cephalopod innovations such as the axial nerve cord. Altogether, our results contribute to the understanding of the molecular and evolutionary history of signal transduction and provide insights into the role of this expansion during the emergence of cephalopod novelties and/or adaptations.
Data from: Body size affects the evolution of hidden colour signals in moths
Many cryptic prey have also evolved hidden contrasting colour signals which are displayed to would-be predators. Given that these hidden contrasting signals may confer additional survival benefits to the prey by startling/intimidating predators, it is unclear why they have evolved in some species, but not in others. Here, we have conducted a comparative phylogenetic analysis of the evolution of colour traits in the family Erebidae (Lepidoptera), and found that the hidden contrasting colour signals are more likely to be found in larger species. To understand why this relationship occurs, we present a general mathematical model, demonstrating that selection for a secondary defence such as deimatic display will be stronger in large species when (i) the primary defence (crypsis) is likely to fail as its body size increases and/or (ii) the secondary defence is more effective in large prey. To test the model assumptions, we conducted behavioural experiments using a robotic moth which revealed that survivorship advantages were higher against wild birds when the moth has contrasting hindwings and large size. Collectively, our results suggest that the evolutionary association between large size and hidden contrasting signals has been driven by a combination of the need for a back-up defence and its efficacy.
Data from: Evolution of patterned plumage as a sexual signal in estrildid finches
Colour patterns, such as bars or dots, that cover the body surface of animals are generally thought to play roles in signalling and camouflage. In birds, however, the macroscopic aspects of plumage colouration are less well understood, as past studies typically described plumage colourations by using spectrophotometric analyses. To provide insight into the evolution of plumage patterns as sexual signals, we characterised interspecific and intersexual variations in the plumage patterns of estrildid finches and tested their associations with other courtship signals and life-history traits using a comparative phylogenetic approach. Our results support the idea that plumage patterns in estrildids are favoured by sexual selection because large-sized conspicuous plumage patterns are possessed by species with an elaborate courtship dance. These plumage patterns may also play roles in social signalling because patterns are more conspicuous in species with intraspecific brood parasitism. We predict that pattern traits can be favoured by mate choice or intra-sexual competition when they can serve as honest indicators of individual condition. As our results are consistent between the sexes, we suggest that the same selective force is acting on the evolution of plumage patterns in males and females in parallel. Finally, we also found a trade-off between large size and vivid colour patterns, suggesting that too conspicuous patterns are costly, presumably because of the risk of catching the eyes of potential predators. Therefore, plumage patterns are also shaped by natural selection.
Data from: Biased generalization of salient traits drives the evolution of warning signals
The importance of receiver biases in shaping the evolution of many signalling systems is widely acknowledged. Here we show that receiver bias can explain which traits evolve to become warning signals. For warning colouration, a generalization bias for a signalling trait can result from predators learning to discriminate unprofitable from profitable prey. However, since the colour patterns of prey are complex traits with multiple components, it is crucial to understand which of the many aspects of prey appearance evolve into signals. We provide experimental evidence that the more salient differences in prey traits give rise to greater generalization bias, corresponding to stronger selection towards trait exaggeration. Our results are based on experiments with domestic chickens as predators in a Skinner-box-like setting, and imply that the difference in appearance between profitable and unprofitable prey that is most rapidly learnt produces the greatest generalization bias. As a consequence, certain salient traits of unprofitable prey are selected towards exaggeration to even higher salience, driving the evolution of warning colouration. This general idea may also help to explain the evolution of many other striking signalling traits found in nature.
Data from: Carotenoid-dependent signals and the evolution of plasma carotenoid levels in birds
Sexual selection has resulted in a wide array of ornaments used in mate choice, and such indicator traits signal quality honestly when they bear costs, precluding cheating. Carotenoid-dependent coloration has attracted considerable attention in this context, because investing carotenoids in coloration has to be traded off against its physiological functions; carotenoids are antioxidants and increase immunocompetence. This trade-off is hypothesized to underlie the honesty of carotenoid-dependent coloration, signaling the "handicap" of allocating carotenoids away from somatic maintenance toward sexual display. Utilizing recent advances in modeling adaptive evolution, we used a comparative approach to investigate the evolution of plasma carotenoid levels using a species-level phylogeny of 178 bird species. We find that the evolutionary optimum for carotenoid levels is higher in lineages that evolved carotenoid-dependent coloration, with strong attraction toward this optimum. Hence, carotenoids do not appear to be limiting, given that higher carotenoid levels readily evolve in response to the evolution of carotenoid-dependent coloration. These findings challenge the assumption that carotenoids are a scarce resource and thus also challenge the hypothesis that physiological resource value of carotenoids underlies honesty of carotenoid-dependent traits. Therefore, the comparative evidence suggests that other factors, such as the acquisition and incorporation of carotenoids, are involved in maintaining signal honesty.
Data from: The evolution of floral signals in relation to range overlap in a clade of California Jewelflowers (Streptanthus s.l.)
Because of their function as reproductive signals in plants, floral traits experience distinct selective pressures related to their role in speciation, reinforcement, and prolonged coexistence with close relatives. However, few studies have investigated whether population-level processes translate into detectable signatures at the macroevolutionary scale. Here, we ask whether patterns of floral trait evolution and range overlap across a clade of California Jewelflowers reflect processes hypothesized to shape floral signal differentiation at the population level. We found a pattern of divergence in floral scent composition across the clade such that close relatives had highly disparate floral scents given their age. Accounting for range overlap with close relatives explained additional variation in floral scent over time, with sympatric species pairs having diverged more than allopatric species pairs given their age. However, three other floral traits (flower size, scent complexity, and flower color) did not fit these patterns, failing to deviate from a null Brownian Motion model of evolution. Together, our results suggest that selection for divergence among close relatives in the composition of floral scents may play a key, sustained role in mediating speciation and coexistence dynamics across this group, and that signatures of these dynamics may persist at the macroevolutionary scale.
Data from: Vocal plasticity in mallards: multiple signal changes in noise and the evolution of the Lombard effect in birds
Signal plasticity is a building block of complex animal communication systems. A particular form of signal plasticity is the Lombard effect, in which a signaler increases its vocal amplitude in response to an increase in the background noise. The Lombard effect is a basic mechanism for communication in noise that is well-studied in human speech and which has also been reported in other mammals and several bird species. Sometimes, but not always, the Lombard effect is accompanied by additional changes in signal parameters. However, the evolution of the Lombard effect and other related vocal adjustments in birds are still unclear because so far only three major avian clades have been studied. We report the first evidence for the Lombard effect in an anseriform bird, the mallard (Anas platyrhynchos). In association with the Lombard effect, the fifteen ducklings in our experiment also increased the peak frequency of their calls in noise. However, they did not change the duration of call syllables or their call rates as has been found in other bird species. Our findings support the notion that all extant birds use the Lombard effect to solve the common problem of maintaining communication in noise, i.e. it is an ancestral trait shared among all living avian taxa, which means that it has evolved more than 70 million years ago within that group. At the same time, our data suggest that parameter changes associated with the Lombard effect follow more complex patterns, with marked differences between taxa, some of which might be related to proximate constraints..
Data from: Birdsong performance and the evolution of simple (rather than elaborate) sexual signals
Sexual signals are often elaborate, due to sexual selection for signals of individual quality. Contrary to expectation, however, the elaboration of signals such as birdsong is not related to the strength of sexual selection across species. With a comparative study across wood warblers (family Parulidae), we show a compromise between advertising the performance of trills (syllable repetitions) and song complexity, which can result in the evolution of simple, rather than elaborate, song. Species with higher trill performance evolved simple songs with more extensive trilled syntax. This advertises trill performance, but reduces syllable diversity in songs. These two traits are commonly sexually selected in songbirds, but indexes of sexual selection were not related to either in wood warblers. This is consistent with sexual selection targeting different traits in different species, sometimes resulting in simple signals. We conclude that the evolution of sexual signals can be unpredictable when their physiology affords multiple or, as here, opposing ways of advertising individual quality.
Data from: Birdsong performance and the evolution of simple (rather than elaborate) sexual signals
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Data from: Evolution of patterned plumage as a sexual signal in estrildid finches
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.