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1,913
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Dataset results
1,913 results for “single cell RNA sequencing”
A molecular cell atlas of the human lung from single cell RNA sequencing
<p>https://cellxgene.cziscience.com/collections/5d445965-6f1a-4b68-ba3a-b8f765155d3a</p> <p>https://www.nature.com/articles/s41586-020-2922-4</p>
Single-nucleus RNA-sequencing reveals oligodendrocytes and their progenitors as vulnerable cell types in prefrontal cortex and anterior cingulate of brains with Parkinson's disease
<p>Several prior studies have proposed the involvement of various brain regions and cell types in Parkinson's disease (PD) pathology. Here, we performed snRNA-seq on the prefrontal cortex and anterior cingulate regions from post-mortem control and PD brain tissue. We found a dramatic association of oligodendrocytes and oligodendrocyte precursor cells with PD-linked risk loci and reported several dysregulated genes and pathways, including regulation of tau-protein kinase activity, regulation of inclusion body assembly and protein processing involved in protein targeting to mitochondria.</p>
The contribution of multiplexing single cell RNA sequencing in acute myeloid leukemia
<p>Figures and supplimentary data of article : " The contribution of multiplexing single cell RNA sequencing in acute myeloid leukemia"</p>
Processed Single-cell RNA-sequencing data from adult recurrent respiratory papillomatosis
<p>.rds file (read in R) that contains processed single-cell RNA-sequencing data from 13 untreated adult recurrent respiratory papillomatosis clinical samples. The associated raw RNA sequencing data is available through The Database of Genotypes and Phenotypes (dbGaP), accession number phs003349.v1.p1. Sequences were also alsigned to a, HPV reference to allow quantification of HPV 6 or 11 gene expression. </p>
"Immunoregulation in Atherosclerosis: A Single-Cell RNA Sequencing Study"
ClinicalTrials.gov study NCT06860295. IPD Sharing: YES. Countries: 1. Publications: 15.
Discovering Early Biomarkers in Circulating Endothelial Cells for Diabetes Complications by Single Cell RNA Sequencing
ClinicalTrials.gov study NCT05169502. IPD Sharing: YES. Countries: 1. Publications: 4.
Single cell RNA sequencing of lateral and medial olivocochlear efferent neurons using PatchSeq
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Spatial reconstruction of the early hepatic transcriptomic landscape after an acetaminophen overdose using single-cell RNA sequencing
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Differential analysis of binarized single-cell RNA sequencing data captures biological variation
<p>Processed datasets used for binary differential analysis experiments.</p>
A systematic evaluation of highly variable gene selection methods for single-cell RNA-sequencing
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Healthy woodchuck genome with viral sequences appended used for single-cell RNA-seq analysis
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Exploring the cellular landscape of circular RNAs using full-length single-cell RNA sequencing
<p>Source data for our circSC manuscript.</p>
Datasets for the paper "Regulation of endocrine cell alternative splicing revealed by single-cell RNA sequencing in type 2 diabetes pathogenesis."
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Functionally heterogeneous human satellite cells identified by single cell RNA sequencing
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Single-cell RNA sequencing reveals molecular features of postnatal maturation in the murine retinal pigment epithelium
GEO Series GSE203138. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
single cell-RNA sequencing for Immune cells from mouse brain tumor post control diet
GEO Series GSE200533. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Discovery of target genes and pathways of blood trait loci using pooled CRISPR screens and single cell RNA sequencing
GEO Series GSE171452. Homo sapiens. 28 samples. Type: Other.
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects (QUARTZ-Seq2)
GEO Series GSE133543. Canis lupus familiaris; Homo sapiens; Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Characterization of Diabetic and Non-Diabetic Foot Ulcers Using Single-Cell RNA-Sequencing
GEO Series GSE248247. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of human osteosarcoma
GEO Series GSE162454. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.