Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
894
datasets available to search
ShareScore release 0.7.1
Dataset results
894 results for “single-cell RNA-seq”
Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [RNA-seq]
GEO Series GSE155649. Homo sapiens. 77 samples. Type: Other.
Analysis of single-cell RNA-seq data from human PBMCs and from in vitro cultures of human cord blood CD34+ progenitors encompassing different DC types
GEO Series GSE115405. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis between single-cell RNA-seq and single-molecule RNA FISH indicates that the pyrimidine nucleobase idoxuridine (IdU) globally amplifies transcriptional noise
GEO Series GSE263194. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq in a comparative primate skeletal cell culture model [2]
GEO Series GSE181743. Pan troglodytes; Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
C1 single-cell RNA-seq of Adult Human spermatoognia
GEO Series GSE108977. Homo sapiens. 635 samples. Type: Expression profiling by high throughput sequencing.
CTLA-4 tail fusion enhances CAR-T anti-tumor immunity [single-cell RNA-seq]
GEO Series GSE234347. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq uncovers the pathological alterations of pancreatic islets in type 2 diabetes mice
GEO Series GSE200531. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis unveils a prevalent epithelial/mesenchymal hybrid state during mouse organogenesis
GEO Series GSE87038. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative CD117+ CD34+ cells)
GEO Series GSE70243. Mus musculus. 66 samples. Type: Expression profiling by high throughput sequencing.
Single-cell chromatin accessibility identifies pancreatic islet cell type- and state-specific regulatory programs of diabetes risk [RNA-seq]
GEO Series GSE160473. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of the mouse lymph node lymphatic vasculature: SMART-seq2
GEO Series GSE143877. Mus musculus. 384 samples. Type: Expression profiling by high throughput sequencing.
single-cell RNA-seq dataset of P1 and P7 mice hearts.
GEO Series GSE305621. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive analysis of metastatic gastric cancer tumor cells using Single-cell RNA-seq
GEO Series GSE158631. Homo sapiens. 94 samples. Type: Expression profiling by high throughput sequencing.
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility (Mouse single cell RNA-Seq mESCs)
GEO Series GSE148268. Mus musculus. 192 samples. Type: Expression profiling by high throughput sequencing.
Bioinformatics and single-cell CRISPRi-based screen reveals effector genes and implicates multi-tissue etiology for BMD [bulk RNA-seq]
GEO Series GSE261282. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Characterization of hormone-producing cell types in the medaka pituitary gland using single-cell RNA-seq
GEO Series GSE162787. Oryzias latipes. 2 samples. Type: Expression profiling by high throughput sequencing.
Mapping heterogeneity in a patient-derived melanoma culture by single-cell RNA-seq
GEO Series GSE81383. Homo sapiens. 307 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of the goat oocytes samples from high fertility group (>three babys per birth) and low fertility group (< two babys per birth)
GEO Series GSE136005. Capra hircus. 29 samples. Type: Expression profiling by high throughput sequencing.
The Fetal and Infant Human Testis Cell Atlas via Single-cell RNA-seq
GEO Series GSE161617. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Joint single-cell profiling of Cas9 edits and transcriptomes reveals on- and off-target effects on gene expression (RNA-seq)
GEO Series GSE313958. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.