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Fig. 7 in Croton sertanejus, a new species from Seasonally Dry Tropical Forest in Brazil, and redescription of C. echioides (Euphorbiaceae)
Fig. 7. Cross sections of the petiole of Croton echioides Baill. and C. sertanejus Sodré & M.J.Silva sp. nov. A–E. Croton echioides. A. Median portion of the petiole. B. Detail of accessory vascular bundles. C. Detail of the epidermis, cortex and vascular cylinder. D–E. Detail of vascular cylinder, laticifers, gelatinous fibers and druses. – F–J. C. sertanejus sp. nov. F. Median portion of the petiole. G. Detail of accessory vascular bundles. H. Detail of the epidermis and cortex. I–J. Detail of vascular cylinder, gelatinous fibers and druses. Asterisks indicate laticifers. Abbreviations: av = accessory vascular bundles; cl = collenchyma; co = cortex; d = druses; ep = epidermis; f = gelatinous fibers; p = pericycle; pa = ground parenchyma; ph = phloem; pi = pith; stt = stellate trichome; vc = vascular cylinder; xy = xylem. A–E = R.C. Sodré et al. 3284 (BOTU); F–J = R.C. Sodré et al. 3350, holotype (BOTU). Scale bars: A, F = 300 µm; B–D, G–H, J = 50 µm; C = 200 µm; E, I = 20 µm.
Fig. 3 in Croton sertanejus, a new species from Seasonally Dry Tropical Forest in Brazil, and redescription of C. echioides (Euphorbiaceae)
Fig. 3. Geographical distribution of Croton echioides Baill. and C. sertanejus Sodré & M.J.Silva sp. nov. Ecoregions classified according to Dinerstein et al. (2017) (avaliable athttps://ecoregions2017.appspot.com). Abbreviations for Brazilian States: AL = Alagoas; BA = Bahia; CE = Ceará; ES = Espirito Santo; DF = Federal District; GO = Goiás; MA = Maranhão; MG = Minas Gerais; PB = Paraíba; PE = Pernambuco; PI = Piauí; RJ = Rio de Janeiro; RN = Rio Grande do Norte; SE = Sergipe; SP = São Paulo; TO = Tocantins.
Fig. 5. Croton echioides Baill. A–B. Habit. C. Flowering branch. D in Croton sertanejus, a new species from Seasonally Dry Tropical Forest in Brazil, and redescription of C. echioides (Euphorbiaceae)
Fig. 5. Croton echioides Baill. A–B. Habit. C. Flowering branch. D. Inflorescence showing pistillate flowers and staminate buds, detail of the pistillate flowers in the insert. E. Pistillate flowers. F. Median portion of an inflorescence with bisexual cymules containing one pistillate flower and one staminate bud. G. Detail of the staminate inflorescence. H. Staminate flowers. I. Staminate flowers and buds. J. Fruit. K. Fruit columella. L. Apex of columella with three slightly ascending tips. M. Seed, dorsal side. N. Seed, ventral side. A, F–I. = Population from Igaporã, Bahia (R.C. Sodré et al. 3284; BOTU); B–E. = Population from Abaíra, Bahia (R.C. Sodré et al. 3314; BOTU); J–N. = V.C. Souza et al. 5495 (ESA). Photographs: R.C. Sodré.
Relevant data for publication 'Atmospheric phosphorus deposition amplifies carbon sinks in simulations of a tropical forest in Central Africa' Goll et al.
<p>Plotting scripts and processed output from ORCHIDEE-CNP. The version of ORCHIDEE is available here: https://doi.org/10.14768/391825ae-d257-4365-9820-30ea1940914c</p>
Text-fig. 5. Vegetation zones in P. R. China (Editorial Committee of Vegetation Map of China, The Chinese Academy of Sciences 2007), and assumed location of extant reference vegetation type of Wiesa fossil assemblage (rectangle), as revealed from qualitative floristic analysis. Extant reference vegetation type present in southern belt of zone of subtropical evergreen broadleaved forest, with minor overlap into zone of tropical forest. in Assessment Of Phytogeographic Reference Regions For Cenozoic Vegetation: A Case Study On The Miocene Flora Of Wiesa (Germany)
Text-fig. 5. Vegetation zones in P. R. China (Editorial Committee of Vegetation Map of China, The Chinese Academy of Sciences 2007), and assumed location of extant reference vegetation type of Wiesa fossil assemblage (rectangle), as revealed from qualitative floristic analysis. Extant reference vegetation type present in southern belt of zone of subtropical evergreen broadleaved forest, with minor overlap into zone of tropical forest.
Fig. 6 in Croton sertanejus, a new species from Seasonally Dry Tropical Forest in Brazil, and redescription of C. echioides (Euphorbiaceae)
Fig. 6. Cross sections of the leaf blade of C. echioides Baill. (A, E–I, N–Q) and C. sertanejus Sodré & M.J.Silva sp. nov. (B–D, J–M, R–V). A. Median portion of the leaf blade of C. echioides, note the stipitate trichomes of abaxial surface in lateral view. B. Median portion of the leaf blade of C. sertanejus, note the sessile trichomes of abaxial surface in lateral view. C. Leaf margin of C. sertanejus, note simple trichomes of adaxial surface. D. Base of the trichome of adaxial surface of C. sertanejus. E. Vascular bundle of C. echioides. F–H. Median portion of the leaf blade of C. echioides. I. Leaf margin of C. echioides. J. Vascular bundle of C. sertanejus. K–L. Median portion of the leaf blade of C. sertanejus. M. Leaf margin of C. sertanejus. N. Primary vein of C. echioides. O. Detail of vascular cylinder of C. echioides primary vein. P. Collenchyma in adaxial surface of C. echioides primary vein. Q. Detail of the vascular bundle, note xylem, phloem, laticifer and druse. R. Primary vein of C. sertanejus. S. Detail of vascular cylinder of C. sertanejus primary vein. T. Collenchyma in adaxial surface of C. echioides primary vein. U. Detail of the epidermis and cortex of C. echioides primary vein. V. Detail of the vascular bundle, note xylem, phloem and druse. Arrowheads indicate stomata; asterisks indicate laticifers. Abbreviations: cl = collenchyma; co = cortex; d = druses; ep = epidermis; i = idioblasts; pa = ground parenchyma; ph = phloem; pp = palisade parenchyma; sp = spongy parenchyma; st = simple trichome; stt = stellate trichome; vb = vascular bundle; vc = vascular cylinder; xy = xylem. A, E–I, N–Q = R.C. Sodré et al. 3284 (BOTU); B–D, J–M, R–V = R.C. Sodré et al. 3350, holotype (BOTU). Scale bars: A–C, N, R = 200 µm; D–G, I–M, P–Q, T–V = 50 µm; H = 20 µm; O, S = 100 µm.
Fig. 1 in Croton sertanejus, a new species from Seasonally Dry Tropical Forest in Brazil, and redescription of C. echioides (Euphorbiaceae)
Fig. 1. Croton sertanejus Sodré & M.J.Silva sp. nov. A. Flowering branch. B. Detail of older portion of stem with leaf scars. C 1 –C 2. Indumentum of the stems. C 1. Tomentose indumentum. C 2. Hirsute indumentum. D 1 –D 3. Trichomes of the stems. D 1. Stellate trichome. D 2. Multiradiate-porrect trichome. D 3. Stellate-porrect trichome. E. Stipule, ventral surface. F 1 –F 2. Leaves. F 1. Elliptic leaf blade. F 2. Ovate leaf blade. G. Detail of the galls on the leaf blade. H. Extrafloral nectaries of leaf base in adaxial view. I. Colleters of leaf margin in adaxial view. J1–J3. Indumentum of leaf blades. J1. Tomentose indumentum of abaxial surface. J2. Sparse indumentum of simple, stellate-porrect or 2-radiate trichomes of adaxial surface. J 3. Sparse indumentum of stellate trichomes of adaxial surface. K. Inflorescence. L 1. Staminate flower bract, ventral surface. L 2. Staminate flower bracteole, ventral surface. M. Staminate flower. N 1 – N 3. Lobes of staminate flower calyx in dorsal view. N 1. Two lobes showing the union of the calyx. N 2. Dense indumentum of stellate-porrect trichomes. N3. Sparse indumentum of stellate-porrect trichomes. O 1 –O 2. Pistillate flower petals in dorsal view. O 1. Obovate petal. O 2. Oblanceolate petal. P. Stamen. Q 1. Pistillate flower bract, ventral surface. Q 2. Pistillate flower bracteole, ventral surface. R. Pistillate flower. S 1 –S 2. Pistillate flower sepal. S 1. Dorsal view. S 2. Ventral view. T. Gynoecium. U. Nectary disk and reduced petals of the pistillate flowers (cut out sepals and gynoecium removed). V. Fruit. W 1. Fruit columella. W2. Apex of columella with irregular and plane tips. W3. Apex of columella with three slightly ascending tips. X 1. Seed, dorsal side. X2. Seed, ventral side. Drawing by Renato Galhardo: A–U = R.C. Sodré et al. 3350, holotype (BOTU); V–X = K.N.C. Castro & J.B.A. Souza 471 (CEN).
Fig. 4. Croton echioides Baill. A. Flowering branch. B in Croton sertanejus, a new species from Seasonally Dry Tropical Forest in Brazil, and redescription of C. echioides (Euphorbiaceae)
Fig. 4. Croton echioides Baill. A. Flowering branch. B. Detail of the indumentum of the stems and stipule. C 1 –C 2. Trichomes of the stems. C 1. Stellate-rotate trichome. C 2. Stellate-porrect trichome. D 1 –D 2. Stipules. D1. Surface. D 2. Ventral surface. E 1–E3. Leaves, note the variation in the shape of the leaf blades and in the length of the petioles. F1–F3. Extrafloral nectaries of leaf base in abaxial view. F1. Stipitatepatelliform. F 2. Obconic. F 3. Cylindric. G. Colleters of leaf margin in adaxial view. H 1. Leaf indumentum of the abaxial surface. H 2. Leaf indumentum of the adaxial surface. I. Inflorescence. J 1. Staminate flower bract, ventral surface. J 2. Staminate flower bracteole, ventral surface. K. Staminate flower. L 1 –L 2. Lobes of staminate flower calyces in dorsal view. L1. Dense indumentum. L2. Sparse indumentum. M1–M2. Staminate flower petals in dorsal view. M1. Obovate petal. M2. Oboval-oblanceolate petal. N. Stamen. O 1. Pistillate flower bract, ventral surface. O 2 –O 3. Pistillate flower bracteoles, ventral surface. P. Pistillate flower. Q. Pistillate flower in upper view showing ventral surface of the sepals, disk and reduced petals (gynoecium removed), note the unequal sepals. R 1 –R 2. Indumentum of ventral surface of the pistillate flower sepals. S. Pistillate flower in lower view showing dorsal surface of sepals. T. Indumentum of dorsal surface of the pistillate flower sepals. U. Gynoecium. V. Nectary disk and reduced petals of the pistillate flowers (cut out sepals and gynoecium removed). W. Fruit. X 1. Fruit columella. X 2. Apex of columella with plane tips. X 3. Apex of columella with three slightly ascending tips. Y 1. Seed, dorsal side. Y 2. Seed, ventral side. Drawing by Renato Galhardo: A, E2, F1 = E. Melo et al. 7571 (HUEFS); E1, F3, O1–V = R.C. Sodré et al. 3284 (BOTU); B–D2, G–N = R.C. Sodré et al. 3314 (BOTU); E3, F2, W–Y2 = V.C. Souza et al. 5495 (ESA).
Data from: Active restoration accelerates recovery of tropical forest bird assemblages over two decades
<p>Choosing effective methods to restore habitat for the diverse faunal assemblages of tropical forests is hampered by lack of long-term data comparing multiple restoration treatments. We conducted area counts of bird assemblages over 12 years (~5-17 years since restoration) in a blocked experiment with two active planted treatments (tree plantations and applied nucleation) and a passive restoration treatment (natural regeneration) replicated at 11 sites in Costa Rica. We also surveyed six pastures and five remnant forest sites to assess recovery of avian species richness, composition, forest specialists, and range-restricted species in restoration plots relative to degraded and reference systems. Restoration treatments showed increased resemblance of avian assemblages to remnant forest over time. Applied nucleation proved equally effective as plantation, despite a reduced planted area, whereas natural regeneration recovered more slowly. Assemblage-level trends in avian species richness and compositional similarity to reference forest are underpinned by reductions in use by pasture birds and by gradual increases in richness of forest-affiliated species. Because forest-affiliated species tend to have narrower distributions than the open-country species they replace, forest restoration can reduce biotic homogenization at the local scale. Restoration practitioners should consider applied nucleation as an alternative to standard plantations if seeking rapid recovery of bird assemblages. However, the ecological return on investment from natural regeneration increases over a couple of decades. Managers should monitor trends in forest-affiliated and range-restricted species to track the recovery of the full avian assemblages, since coarse metrics like species richness and overall compositional similarity may plateau relatively quickly.</p>
Data from : Damage to tropical forests caused by tropical cyclones is driven by wind speed but mediated by topographical exposure and tree characteristics
<p>These datasets have been used in the following paper:</p> <p>Ibanez, T., Bauman, B., Aiba, S.-i., Arsouze, T. Bellingham, P.J., Birkinshaw, C., Birnbaum, P., Curran, T.J., DeWalt, S.J., Dwyer, J., Fourcaud, T., Franklin, J., Kohyama, T.S., Menkes, C. Metcalfe, D.J., Murphy, H., Muscarella, R., Plunkett, G.M., Sam, C., Tanner, E., Taylor, B.N., Thompson, J., Ticktin, T., Tuiwawa, M.V., Uriarte, U., Webb, E.L., Zimmerman, J.K., Keppel, G. Damage to tropical forests caused by tropical cyclones is driven by wind speed but mediated by topographical exposure and tree characteristics. Accepted for publication in <em>Global Change Biology</em>.</p> <p>Data users are invited to cite this paper and the original paper(s) corresponding to the data they use (see "Reference" column in each dataset). We also encourage potential users to contact the data owners for collaboration.</p> <p>These datasets are compiled empirical data on the damage caused by 11 cyclones occurring over the past 40 years, from 74 forest plots representing tropical regions worldwide. Damage are given at the tree (whether or not each tree has been uprooted or snapped) and at the plot level (number of uprooted or snapped trees in each plot).</p> <p>MSW: Maximum sustained wind speed (m.s-1)</p> <p>EXP: Topographical exposure to wind</p> <p>DBH: Diameter at breast height (cm)</p> <p>WD: Wood density (g.cm-3)</p>
APPENDIX 3. — Maximum likelihood phylogram inferred from 47 taxa and 3314 in Mucoralean fungi in Thailand: novel species of Absidia from tropical forest soil
APPENDIX 3. — Maximum likelihood phylogram inferred from 47 taxa and 3314 characters based on LSU, SSU and ACT-1 matrix using GTR+G model. ML bootstrap support (≥ 70%) are indicated above the branches or near the nodes. Tree is artificially rooted using Cunninghamella homothallica (CBS 168.53), C. phaeospora (CBS 692.68), and C. bainieri (FSU319). The new species are in black bold and the type species in the dataset are indicated using T. (-) represent bootstrap support lower than 70%. (*) indicates unrecovered branching.
FIG. 7 in Mucoralean fungi in Thailand: novel species of Absidia from tropical forest soil
FIG. 7. — Mycelial growth of A. edaphica V.GHurdeal., E.Gentekaki., H.B.Lee & K.D.Hyde, sp. nov.(MFLUCC 20-0088, ex-type) and A. soli V.GHurdeal., E.Gentekaki., H.B.Lee & K.D.Hyde, sp. nov. (MFLUCC 20-0086, ex-type) in various media at room temperature (around 26°C to 27°C) after two days: A-D, colonies on MEA; E-H, colonies on PDA; I-L, colonies on CMA; M-P, colonies on YMA. The first two rows represent colonies of of A. edaphica sp. nov. and the bottom two rows A. soli sp. nov (obverse (first and third rows) and reverse (second and fourth rows).
FIG. 6 in Mucoralean fungi in Thailand: novel species of Absidia from tropical forest soil
FIG. 6. — Mycelial growth of Absidia edaphica V.GHurdeal., E.Gentekaki., H.B.Lee & K.D.Hyde, sp. nov. and Absidia soli V.GHurdeal., E.Gentekaki., H.B.Lee & K.D.Hyde, sp. nov. in different media at 25°C.
Data from: Impact of ground-level ozone on tropical forests
<p>Elevated ground-level ozone (O<sub>3</sub>), a result of human activity, is known to reduce plant productivity but its impact on tropical forests remains unclear. Here for the first-time we measured the O<sub>3</sub> susceptibility in a range of ten tropical tree species and use these data to determine how changing O<sub>3</sub> exposure has impacted tropical forest productivity and the global carbon cycle.</p>
FIGURE 1 in Ectoparasitic flies (Diptera, Streblidae) on bats (Mammalia, Chiroptera) in a dry tropical forest in the northern Colombia
FIGURE 1: Study sites of host-ectoparasite relationship between Streblidae and bats in Colombia. Darker areas correspond to higher altitudes.
Figure 1 in Direct seeding as a recruitment alternative for the threatened tropical palm Syagrus coronata (Mart.) Beccari in Brazilian dry forest
Figure 1. Effects of habitat and defleshing treatments on the seed fate of Syagrus coronata after 240 days during two years of experiment.
Figures 5–10 in Scopaeus saotomensis spec. nov., a flightless rove beetle from the Island of São Tomé (Coleoptera: Staphylinidae: Paederinae: Lathrobiini) - Isolation and adaptation in a dark, humid, tropical forest environment
Figures 5–10. Scopaeus saotomensis, holotype, República Democrática de São Tomé e Príncipe, São Tomé, Lagoa Amelia; aedeagus in lateral (5), ventral (6), dorsal (7) view; abdominal sternite VII (8); abdominal sternite VIII in ventral (9) and lateral (10) view. Abbreviations: dl – distal lobes (apical lobes and dorsal lobe not distinguishable), f – flagellum, ll – lateral lobes, mf – median foramen, mtf – median tooth of flagellum, p – parameres, sl – groups of setae of lateral lobes, sp – setae of phallobase, vdl – ventrodextral, lobiform enlargement of distal lobes, vl – ventral lobe.
Figure 1 in Scopaeus saotomensis spec. nov., a flightless rove beetle from the Island of São Tomé (Coleoptera: Staphylinidae: Paederinae: Lathrobiini) - Isolation and adaptation in a dark, humid, tropical forest environment
Figure 1. Habitus of Scopaeus saotomensis, holotype, República Democrática de São Tomé e Príncipe, São Tomé, Lagoa Amelia.
Figures 2–4 in Scopaeus saotomensis spec. nov., a flightless rove beetle from the Island of São Tomé (Coleoptera: Staphylinidae: Paederinae: Lathrobiini) - Isolation and adaptation in a dark, humid, tropical forest environment
Figures 2–4. Scopaeus saotomensis, lateral aspect exhibiting basal depressions of abdominal tergites (upper arrows), basal constrictions of abdominal sternites (lower arrows), and stridular file on dorsolateral surface of metaventrite (2); enlarged view of stridular file (3); plectral ridges on posterior surface of base of mesothoracic leg (4).
Figs. 2–4 in Myrmecofauna (Hymenoptera: Formicidae) response to habitat characteristics of tropical montane cloud forests in central Veracruz, Mexico
Figs. 2–4. Species richness, diversity profiles, and rank–abundance curves. Fig. 2. Comparison of the richness of woody plants at a sampling coverage of 90% and of ants at 85% coverage, among 5 fragments of tropical montane cloud forest in central Veracruz, Mexico. Statistical differences are considered when 95% confidence intervals do not overlap, whereas no differences are assumed when they do overlap, with an α = 0.05. Fig. 3. Diversity profiles of the ant assemblages of F1–F5 based on the equivalent species number. Statistical differences are considered when 95% confidence intervals do not overlap, whereas no differences are assumed when they do overlap, with an α = 0.05. Fig. 4. Rank–abundance curves of the ant assemblages of F1–F5. Total number of ant incidences in each fragment is 60 traps. Only those species with a relative abundance equal to or higher than 10% in a given fragment are shown. Ant species are numbered in accordance with Table 2.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.