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109 results for “visualisation”
Figure 5 from: Mesa-Varona O, Plaza-Rodríguez C, Valentin L, Filter M (2024) WarenstromInfo: a tool for the easy extraction and visualisation of trade flow data. Research Ideas and Outcomes 10: e112227. https://doi.org/10.3897/rio.10.e112227
Figure 5 A screenshot of the BACI SQLite database builder workflow. The workflow presented here is organised into two main sections, with interconnected KNIME nodes displayed in each section. The yellow-boxed nodes are responsible for creating and loading the database where the data are stored. The green-boxed section shows: Locate BACI csv files (BACI files must have been previously downloaded and stored in a folder that is pointed in the "List Files/Folders" KNIME node). Split the files according to the HS data provided and Load csv files, filtering and storage in SQLite database (carried out in each consecutive metanode). In this last section, the user can decide not to filter the data or customise the filter criteria of the BACI database, including more types of data apart from those agrifood data that are included in the default configuration of the workflow. Variable flow connections (red lines) can be removed in the second green-boxed section, if an HPC (High Performance Computing) service is available. This will allow the workflow to run much faster as the nodes will not be executed one after the other, but all at the same time.
Figure 4 from: Mesa-Varona O, Plaza-Rodríguez C, Valentin L, Filter M (2024) WarenstromInfo: a tool for the easy extraction and visualisation of trade flow data. Research Ideas and Outcomes 10: e112227. https://doi.org/10.3897/rio.10.e112227
Figure 4 WI User Interfaces: UI4. The UI4 provides an overview of the final WI outputs, displaying a list with the initial input variables (L), three maps displaying trade flows (a world map, a world map focused on Europe and an European map) (M), download options (N), slide filter bars for value and weight preview (O) and trade flow data in the preview table (P).
Figure 1 from: Mesa-Varona O, Plaza-Rodríguez C, Valentin L, Filter M (2024) WarenstromInfo: a tool for the easy extraction and visualisation of trade flow data. Research Ideas and Outcomes 10: e112227. https://doi.org/10.3897/rio.10.e112227
Figure 1 WI User Interfaces: UI1. In the UI1, users can select the desired database (EUROSTAT/BACI) (A). The database selection is concluded by clicking "Next" (B), which will lead the user to the following UI.
Figure 2 from: Mesa-Varona O, Plaza-Rodríguez C, Valentin L, Filter M (2024) WarenstromInfo: a tool for the easy extraction and visualisation of trade flow data. Research Ideas and Outcomes 10: e112227. https://doi.org/10.3897/rio.10.e112227
Figure 2 User Interfaces: UI2. In the UI2, the following input options can be selected: standard selection (C), time range of the search (D), the email option (E), the pre-filter option (F) and the table with the embedded live filter (G). Input data from UI2 are processed by clicking "Next" (H).
Video S1: Visualisation of blood flow in CAM
<p>Video S1: Visualisation of blood flow in CAM.</p>
Data from: Exploring and visualising spaces of tree reconciliations
Tree reconciliation is the mathematical tool that is used to investigate the coevolution of organisms, such as hosts and parasites. A common approach to tree reconciliation involves specifying a model that assigns costs to certain events, such as cospeciation, and then tries to find a mapping between two specified phylogenetic trees which minimises the total cost of the implied events. For such models, it has been shown that there may be a huge number of optimal solutions, or at least solutions that are close to optimal. It is therefore of interest to be able to systematically compare and visualise whole collections of reconciliations between a specified pair of trees. In this paper, we consider various metrics on the set of all possible reconciliations between a pair of trees, some that have been defined before but also new metrics that we shall propose. We show that the diameter for the resulting spaces of reconciliations can in some cases be determined theoretically, information that we use to normalise and compare properties of the metrics. We also implement the metrics and compare their behaviour on several host parasite datasets, including the shapes of their distributions. In addition, we show that in combination with multidimensional scaling, the metrics can be useful for visualising large collections of reconciliations, much in the same way as phylogenetic tree metrics can be used to explore collections of phylogenetic trees. Implementations of the metrics can be downloaded from: https://team.inria.fr/erable/en/team-members/blerina-sinaimeri/reconciliation-distances/
Boiti-Leon-Manna Pempinelli equation solution visualisation
Open the record for dataset details and reuse information.
Figure 26 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 26 - Ommatoiulus khroumiriensis sp. n. paratype, left posterior gonopod. Interactive SEM image. [Morphbank # 831016–831034]
Figures 20-25 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figures 20-25 - Ommatoiulus khroumiriensis sp. n. paratypes, gonopod structures. 20 Right promerite, posterior view 21 Right posterior gonopod, mesal view 22 Right posterior gonopod, lateral view 23 Right posterior gonopod, meso-posterior view 24 Right posterior gonopod, anterior-mesal view 25 Right posterior gonopod,anterior view. Abbreviations: ap distal process of the promerite, ap2 lobed process, Co coxite, ds distal process of the solenomerite, F fovea, g seminal groove, hp3, hp4 distal processes of the solenomerite, i lateral incision of the promerite, mp blunt mesal process, M mesal ridge, Ms mesomerite, n notch of the solenomerite, pr triangular subapical process of the solenomerite, Px paracoxite, S solenomerite. Scale bar: 0.1 mm.
Figure 13 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 13 - Ommatoiulus crassinigripes sp. n. paratype,right posterior gonopod. Interactive rotating SEM image. [Morphbank # 831189–831207]
Figure 19 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 19 - Ommatoiulus kefi sp. n. holotype, right posterior gonopod. Interactive SEM image. [Morphbank # 831208-831227]
Figures 7-12 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figures 7-12 - Ommatoiulus crassinigripes sp. n. paratype,gonopod structures. 7 Left promerite, posterior view 8 Right posterior gonopod, lateral view 9 Right posterior gonopod, anterior view 10 Right posterior gonopod, mesal view 11 Right posterior gonopod, posterior view 12 Right posterior gonopod latero-posterior view.Abbreviations: ap distal process of the promerite, ap1 apical mesal process, Co coxite, ds distal process of the solenomerite, F fovea, g seminal groove, ho hook-shaped process, hp1, hp1 distal processes of the solenomerite, i lateral margin incision of the promerite, M mesal ridge, Ms mesomerite, mp distal blunt process of the mesal ridge, n notch of the solenomerite, pr triangular process of the solenomerite, Px paracoxite, S solenomerite, T remnant of telepodite. Scale bar: 0.1 mm
Figure 42 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 42 - Ommatoiulus crassinigripes sp. n., Ommatoiulus khroumiriensis sp. n. and Ommatoiulus punicus. Scatter diagram illustrating size of adult males expressed as maximum vertical body diameter (mm) vs number of podous rings in different developmental stadia (8–11RO).
Figure 40 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 40 - Ommatoiulus chambiensis and Ommatoiulus xerophilus spp. n.Scatter diagram illustrating size of adult males expressed as maximum vertical body diameter (mm) vs number of podous rings in different developmental stadia (8–11RO).
Figure 41 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 41 - Ommatoiulus punicus,specimen from Jebel Rsas, NE Tunisia, right posterior gonopod. Interactive SEM image. [Morphbank # 831228–831245]
Figure 35 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 35 - Ommatoiulus xerophilus sp. n. paratype, right posterior gonopod. Interactive SEM image. [Morphbank # 831246–831263]
Figures 36-39 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figures 36-39 - Ommatoiulus zaghouani sp. n. holotype, gonopod structures. 36 Left promerite, posterior view 37 Left posterior gonopod, mesal view 38 Left posterior gonopods, anterior view 39 Left posterior gonopods, postero-lateral view. Abbreviations: bp1, bp2: small bumps on the apical lateral process, Co coxite, ds distal process of the solenomerite, F fovea, fl folded lamella, g seminal groove, M mesal ridge, Ms mesomerite, i lateral incision on the promerite, Px paracoxite, rp apical mesal process of the promerite, S solenomerite, se serrated process, tp: triangular distal process. Scale bar: 0.1 mm.
Figures 31-34 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figures 31-34 - Ommatoiulus xerophilus sp. n. paratype,gonopod structures. 31 Left gonopod, mesal view 32 Rightpromerite, posterior view 33 Rightposterior gonopod, mesal view 34 Rightposterior gonopod, latero-posterior view. Abbreviations: ap distal process of the promerite, Co coxite, ds distal process of the solenomerite, F fovea, g seminal groove, M mesal ridge, Ms mesomerite, P promerite, Px paracoxite, S solenomerite, se serrations, wl wrinkled lamella. Scale bar: 0.1 mm.
Figure 6 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figure 6 - Ommatoiulus chambiensis sp. n. paratype,right posterior gonopod. Interactive rotating SEM image. [Morphbank # 831160–831177, 831188]
Figures 14-18 from: Akkari N, Koon-Bong Cheung D, Enghoff H, Stoev P (2013) Revolving SEM images visualising 3D taxonomic characters: application to six species of the millipede genus Ommatoiulus Latzel, 1884, with description of seven new species and an interactive key to the Tunisian members of the genus (Diplopoda, Julida, Julidae). ZooKeys 328: 5-45. https://doi.org/10.3897/zookeys.328.5763
Figures 14-18 - Ommatoiulus kefi sp. n. holotype, gonopod structures. 14 Left promerite, posterior view 15 Left posterior gonopod, posterior view 16 Right posterior gonopod, anterior view 17 Right posterior gonopod, mesal view 18 Right posterior gonopod, mesal view. Abbreviations: al apical lobe of the promerite, al1 apical folded lamella of the solenomerite, Co coxite, ds distal process of the solenomerite, F fovea, g seminal groove, lb lateral lobe, m1, m2 apical processes of the mesomerite, M mesal ridge, me median lobe, Ms mesomerite, n notch of the solenomerite, pr triangular process of the solenomerite, Px paracoxite, S solenomerite, T telopodite. Scale bar: 0.1 mm
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.