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Figure 1 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 1 Collection sites in Vietnam and Cambodia in this study, including eight national parks, four nature reserves and two conservation areas.
Figure 7 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 7 Quercus bidoupensis Binh & Ngoc. A Leafy twig B Abaxial side of mature leaf C, D Side view and base view of the cupule, respectively E Inside of cupule F Nut. Materials: A–F from Tagane et al. V4328.
Figure 11 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 11 Quercus donnaiensis A.Camus. A Leafy twig B Infructescence, young fruits and abaxial side of mature leaf C Dried specimen. Materials: A, B from Tagane S., Wai J. V4398 C from Ngoc et al. V3208.
Figure 13 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 13 Quercus langbianensis Hickel & A.Camus. A Leafy twig B Abaxial side of mature leaf C Infructescence and mature fruits D Apex of the nut E Basal scar of the nut F Inside of cupule. Materials: A, B from Tagane et al. V 4165 C–F from Tagane et al. V4166.
Figure 8 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 8 Cladosporium endophyticum (MFLU 18-0005, holotype). a Colony on MEA media b Mycelium masses c–e Conidia and conidiogenous cells f, g Conidia h Conidia and conidiogenous cells. Scale bars: 5 µm (b–h), 10 µm (h).
Figure 9 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 9 Phylogram generated from maximum likelihood analysis based on ITS, TEF1, SSU, LSU and RPB2 sequenced data. Maximum likelihood bootstrap values are given above/below the nodes. The newly generated sequences in red bold. The tree is rooted with Alternaria alternata and Pleospora herbarum.
Figure 7 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 7 Phylogram generated from maximum likelihood analysis based on ITS, TEF1 and Actin sequenced data. Maximum likelihood bootstrap is given above/below the nodes. The newly generated sequences in red bold. The tree is rooted with Cercospora beticola.
Figure 10 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 10 Quercus camusiae Trel. ex Hickel & A.Camus. A Branch with young fruit, B. Infructescence and young fruits C, D Abaxial side of young and mature leaf, E. Dried specimen. Materials: A–D from Tagane et al. V342 E from Toyama et al. V2173.
Figure 12 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 12 Quercus honbaensis Binh, Tagane & Yahara. A Leafy twig B Infructescence and mature fruits, C, D Side view and base view of the cupule, respectively, E. Inside of cupule, F. Nut. Materials: A–F from Toyama et al. V1378.
Figure 6 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 6 Quercus baolamensis Binh & Ngoc. A Leafy twig B Abaxial side of mature leaf C Mature fruit D Inside of cupule E Nut. Materials: A–E from Ngoc et al. V3191.
Figure 2 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 2 Bayesian phylogeny of 29 samples of Quercus and one Trigonobalanus (outgroup) based on rbcL, matK and ITS sequences. Braches are labelled with posterior probabilities.
Figure 3 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 3 NJ tree of 31 samples of Quercus and one Trigonobalanus (outgroup) based on presence/absence data of 16,809 MIG-seq loci. Branches are labelled with bootstrap supports (% of 1000 replicates).
Figure 9 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 9 Quercus cambodiensis Hickel & A.Camus. A Leafy twig B Abaxial side of mature leaf C Infructescence and fruits D Nut E Basal scar of the nut. Materials: A–E from Tagane et al. 4302.
Figure 8 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 8 Quercus blaoensis A.Camus A. Branch with fruits B Young fruit C Dried specimen Materials: A–C from Toyama et al. V1366.
Figure 5 from: Binh HT, Ngoc NV, Tagane S, Toyama H, Mase K, Mitsuyuki C, Strijk JS, Suyama Y, Yahara T (2018) A taxonomic study of Quercus langbianensis complex based on morphology, and DNA barcodes of classic and next generation sequences. PhytoKeys 95: 37-70. https://doi.org/10.3897/phytokeys.95.21126
Figure 5 Quercus baniensis A.Camus. A Leafy twig B Abaxial side of mature leaf C Infructescence and young fruits D Dried specimen. Materials: A, B from Hoang T.S. & Tagane S. V6922 C, D from Tagane et al. V3089.
Figure 5 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 5 Phylogram generated from maximum likelihood analysis based on ITS, LSU and TEF1 sequenced data. Maximum likelihood bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with Tiarosporella paludosa.
Figure 6 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 6 Endomelanconiopsis freycinetiae (MFLU 18-0002, holotype). a–d Mycelia masses. Scale bars: 20 μm (a–c), 10 μm (d).
Figure 4 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 4 Endopandanicola thailandica (MFLU 18-0021, holotype). a Mycelia masses b, c Clamp connections. Scale bars: 10 μm (a), 5 μm (b, c).
Figure 3 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 3 Phylogram generated from maximum likelihood analysis based on ITS sequence data. Maximum parsimony (left) and maximum likelihood (right) bootstrap support values are given above/below the nodes. The newly generated sequences are in red text. The tree is rooted with Pirex concentricus.
Figure 16 from: Tibpromma S, Hyde K, Bhat J, Mortimer P, Xu J, Promputtha I, Doilom M, Yang J, Tang A, Karunarathna S (2018) Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys 33: 25-67. https://doi.org/10.3897/mycokeys.33.23670
Figure 16 Phylogram generated from maximum likelihood analysis based on combined ITS, LSU, SSU and TEF1 sequenced data. Maximum parsimony bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with Thyridium vestitum.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.