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865 results for “Mitochondrial genomes”
Mitochondrial and nuclear genomic response to loss of LRPPRC expression
GEO Series GSE20847. Homo sapiens. 14 samples. Type: Expression profiling by array.
Mitochondrial genome encoded gene expression values from RNA sequencing data from multiple tissue types
GEO Series GSE125013. Homo sapiens. 0 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Genome wide DNA 6mA methylome and transcriptome change upon mitochondrial stress in C.elegans
GEO Series GSE118269. Caenorhabditis elegans. 12 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Genome wide transcriptional change by oligomycin or manipulation of mitochondrial membrane potential
GEO Series GSE254816. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide characterization of mitochondrial DNA methylation in human brain
GEO Series GSE189565. Homo sapiens. 14 samples. Type: Methylation profiling by high throughput sequencing.
Genomic and proteomic profiling reveals reduced mitochondrial function and disruption of the neuromuscular junction driving rat sarcopenia
GEO Series GSE118825. Rattus norvegicus. 54 samples. Type: Expression profiling by array.
FIGURE 1 in The complete mitochondrial genome of Zicrona caerulea (Linnaeus) (Hemiptera: Pentatomidae: Asopinae) and its phylogenetic implications
FIGURE 1. Mitochondrial genome map of Z. caerulea. Protein coding and ribosomal genes are shown with standard abbreviations. The gene sequence is located in the outside of the circle, and the protein sequence is located in the inner circle.
FIGURE 8 in The complete mitochondrial genome of Zicrona caerulea (Linnaeus) (Hemiptera: Pentatomidae: Asopinae) and its phylogenetic implications
FIGURE 8. Inferred phylogenetic relationships among Pentatomoideaa based on the concatenated nucleotide sequences of 13 mitochondrial protein-coding genes using Bayesian Inference (BI) (quadrangles: Phyllocephalinae; circles: Pentatominae; heart: Podopinae; pentagons: Asopinae). Numbers on branches are Bayesian posterior probabilities.
FIGURE 5 in Comparative mitochondrial genomics of Shoveliteratura triangula (Orthoptera Tettigoniidae, Meconematinae) and the first description of a female specimen
FIGURE 5. Shoveliteratura triangula Shi, Bian & Change, 2011, Female. (A) dorsal view of head. (B) ventral view of subgenital plate. (C) lateral view of ovipositor.
FIGURE 3. Putative secondary structures for 22 in Comparative mitochondrial genomics of Shoveliteratura triangula (Orthoptera Tettigoniidae, Meconematinae) and the first description of a female specimen
FIGURE 3. Putative secondary structures for 22 tRNA genes of the Shoveliteratura triangula mitochondrial genome. The tRNAs are labelled with their corresponding amino acids.
FIG. 3 in The mitochondrial genome of Leuctra sp. (Plecoptera: Leuctridae) and its performance in phylogenetic analyses
FIG. 3 Inferred secondary structures of tRNAs from Leuctra sp. The tRNAs are labelled with their corresponding amino acids. Structural elements in tRNA arms and loops are illustrated as for trnV.
FIG. 4 in The mitochondrial genome of Leuctra sp. (Plecoptera: Leuctridae) and its performance in phylogenetic analyses
FIG. 4 Phylogenetic relationships among stoneflies inferred by Bayesian inference (left) and Maximum likelihood analysis (right). Numbers at the nodes are posterior probabilities and bootstrap values, respectively. The family names are listed after the species. The tree was rooted with one outgroup, Parafronurus youi.
FIG. 2 in The mitochondrial genome of Leuctra sp. (Plecoptera: Leuctridae) and its performance in phylogenetic analyses
FIG. 2 Relative synonymous codon usage (RSCU) in Leuctra sp.. Codon families are indicated below the X-axis.
FIG. 1 in The mitochondrial genome of Leuctra sp. (Plecoptera: Leuctridae) and its performance in phylogenetic analyses
FIG. 1 Mitochondrial maps of Leuctra sp. Genes outside the map are transcribed clockwise, whereas those inside the map are transcribed counterclockwise. The inside circles show the GC content and the GC skew. GC content and GC skew are plotted as the deviation from the average value of the entire sequence.
FIGURE 5 in New additions to the Chinese Agraeciini Redtenbacher, 1891 (Orthoptera, Tettigoniidae: Conocephalinae) with report the complete mitochondrial genome of Palaeoagraecia brunnea Ingrisch, 1998
FIGURE 5. Liara (Liara) shii Liu & Bian sp. nov. Male: A. head in frontal view; B–C. head and pronotum: B. dorsal view, C. lateral view; D. head and thoraces in ventral view; E. fore left tibiae in dorso-lateral view; F–I. apex of abdomen: F. lateral view, G. apical view, H. dorso-apical view, I. dorsal view; J. subgenital plate in ventral view.
FIGURE 2 in New additions to the Chinese Agraeciini Redtenbacher, 1891 (Orthoptera, Tettigoniidae: Conocephalinae) with report the complete mitochondrial genome of Palaeoagraecia brunnea Ingrisch, 1998
FIGURE 2. Anelytra (Lichnofugia) symfioma (Ingrisch, 1998). Female: A. head in frontal view; B–C. head and pronotum: B. dorsal view, C. lateral view; D–F. apex of abdomen: D. dorsal view, E. lateral view, F. ventral view; G. apices of ovipositor in lateral view.
FIGURE 3 in New additions to the Chinese Agraeciini Redtenbacher, 1891 (Orthoptera, Tettigoniidae: Conocephalinae) with report the complete mitochondrial genome of Palaeoagraecia brunnea Ingrisch, 1998
FIGURE 3. Anelytra (Lichnofugia) symfioma (Ingrisch, 1998). A–B. processes of thoraces in ventral view; C–D. genicular lobes of hind leg: C. external view, D. internal view; A, C–D. male; B. female.
FIGURE 6 in New additions to the Chinese Agraeciini Redtenbacher, 1891 (Orthoptera, Tettigoniidae: Conocephalinae) with report the complete mitochondrial genome of Palaeoagraecia brunnea Ingrisch, 1998
FIGURE 6. Liara (Liara) shii Liu & Bian sp. nov. Male: A. tegmina in dorsal view; B. stridulatory area; C. stridulatory file; D–F. apex of abdomen: D. dorsal view, E. apical view, F. apico-ventral view.
Figure 2 in What can the mitochondrial genome reveal about higher-level phylogeny of the molluscan class Cephalopoda?
Figure 2. Phylogeny derived from maximum likelihood analysis of 13 concatenated mitochondrial protein-coding genes, coded as amino acids. Bootstrap values generated from 100 replicates.
Figure 3 in Evidence from mitochondrial genomics supports the lower Mesozoic of South Asia as the time and place of basal divergence of cypriniform fishes (Actinopterygii: Ostariophysi)
Figure 3. Ancestral distribution ranges inferred by dispersal-vicariance analysis (DIVA) of 18 lineages at the subfamilial rank. Arrays of presence (1) or absence (0) state shown at each branch are in the order Africa, South Asia, East Asia, Europe, Siberia, western North America, and eastern North America (also see the inset). A number of arrays at some branches indicate equally optimal ancestral patterns. There were 1753 equally optimal combinations of these patterns given by DIVA.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.