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1,174 results for “cancer genomics”

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geo20/100

Genome-wide expression profiling of NSCLC cancer cell lines upon miR-455-5p overexpression

GEO Series GSE193719. Homo sapiens. 10 samples. Type: Expression profiling by array.

openGEO-OpenDec 2022View details →
geo20/100

Immuno-genomic classification of colorectal cancer organoids reveals cancer cells with intrinsic immunogenic properties associated with patient survival

GEO Series GSE171682. Homo sapiens. 174 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo20/100

Image-guided genomics of phenotypically heterogeneous populations reveals vascular signaling during symbiotic collective cancer invasion

GEO Series GSE93865. Homo sapiens. 12 samples. Type: Expression profiling by array.

openGEO-OpenFeb 2017View details →
geo20/100

Tracing the evolution of single-cell 3D genomes in Kras-driven cancers

GEO Series GSE295857. Mus musculus. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo20/100

Genome wide mapping of binding sites of the EMT-inducing transcription factor SNAIL1 in LS174T colorectal cancer cells

GEO Series GSE127183. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo20/100

Genome-wide maps of chromatin state in neurosphere cells and breast cancer cells

GEO Series GSE94804. Homo sapiens; Mus musculus. 40 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenFeb 2017View details →
geo20/100

TRPS1 drives heterochromatic origin refiring and cancer genome evolution

GEO Series GSE118643. Homo sapiens. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.

openGEO-OpenAug 2021View details →
geo20/100

Genome wide DNA methylation analysis of C3(1) SV40TAg mouse model of breast cancer

GEO Series GSE77096. Mus musculus. 12 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenFeb 2018View details →
geo20/100

Contribution of NRF2 to genome-wide distribution of H3K27ac deposition in A549 cells, a non-small cell lung cancer cell line with KEAP1 mutation

GEO Series GSE118840. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo20/100

Genome-wide characterization of gene expression variations and DNA copy number changes in prostate cancer cell lines

GEO Series GSE4396. Homo sapiens. 16 samples. Type: Expression profiling by array; Genome variation profiling by array.

openGEO-OpenMar 2006View details →
geo20/100

SNP data from genomic DNA in patient with rectal cancer

GEO Series GSE35282. Homo sapiens. 43 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.

openGEO-OpenDec 2012View details →
geo20/100

Genomic analysis of chromatin conformation and DNA damage distribution in ovarian cancer cell lines derived following acquired resistance to chemotherapy

GEO Series GSE149147. Homo sapiens. 51 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.

openGEO-OpenMar 2021View details →
geo20/100

Genomic Signatures of Metastasis in Prostate Cancer

GEO Series GSE27105. Homo sapiens. 58 samples. Type: Genome variation profiling by SNP array.

openGEO-OpenDec 2013View details →
geo20/100

The 3D Genomic Landscape of Differential Response to EGFR/HER2 Inhibition in Endocrine-Resistant Breast Cancer

GEO Series GSE144380. Homo sapiens. 24 samples. Type: Other; Expression profiling by high throughput sequencing.

openGEO-OpenDec 2020View details →
geo20/100

The Functional Genomic Landscape of Human Breast Cancer Drivers, Vulnerabilities, and Resistance (pooled shRNA screens)

GEO Series GSE74702. Homo sapiens. 621 samples. Type: Genome variation profiling by array.

openGEO-OpenJan 2016View details →
geo20/100

Genome-wide expression profiling reveals novel biomarkers in epithelial ovarian cancer

GEO Series GSE212991. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo20/100

The Sweden Canceromics Analysis Network - Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the clinical routine

GEO Series GSE60789. Homo sapiens. 110 samples. Type: Expression profiling by high throughput sequencing; Expression profiling by array.

openGEO-OpenDec 2014View details →
geo20/100

Genomic binding of PAX8-PPARG fusion protein regulates cancer-related pathways and alters the immune landscape of thyroid cancer

GEO Series GSE85650. Mus musculus. 47 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.

openGEO-OpenDec 2016View details →
geo20/100

Genomic binding of PAX8-PPARG fusion protein regulates cancer-related pathways and alters the immune landscape of thyroid cancer [array]

GEO Series GSE85583. Mus musculus. 24 samples. Type: Expression profiling by array.

openGEO-OpenDec 2016View details →
geo20/100

UV-induced DNA lesion mapping reveals that carcinogen susceptibility is regulated by genome architecture and dictates cancer mutagenesis

GEO Series GSE94434. Homo sapiens. 4 samples. Type: Other.

openGEO-OpenAug 2017View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record