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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial landscapes of the fed, fasted and refed livers from C57BL/6J mice - spatial transcriptomics
GEO Series GSE222796. Mus musculus. 3 samples. Type: Other.
Spatial transcriptome of FFPE sample by DBiT-seq
GEO Series GSE156862. Mus musculus. 5 samples. Type: Other.
Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: RNA-seq analysis
GEO Series GSE276060. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome]
GEO Series GSE269543. Mus musculus. 4 samples. Type: Other.
Spatial Transcriptomics, Histopathology, and Magnetic Resonance Subfield Segmentation of Hippocampal Sclerosis Compared to Normal Hippocampus: A Proof-of-Concept Study
GEO Series GSE288888. Homo sapiens. 2 samples. Type: Other.
Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis I
GEO Series GSE240098. Medicago truncatula. 7 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics reveals key differences in Alport disease progression and potential targets of hEV treatment in Alport disease
GEO Series GSE245039. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization
GEO Series GSE317379. Homo sapiens. 2 samples. Type: Other.
Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics]
GEO Series GSE296789. Homo sapiens. 21 samples. Type: Other.
Comprehensive immune profiling reveals IFN-γ signaling in T cells mediates parasite phagocytosis in a rodent malaria model : Spatial transcriptomics data
GEO Series GSE283333. Mus musculus. 2 samples. Type: Other.
Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics]
GEO Series GSE269283. Mus musculus. 4 samples. Type: Other.
Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis
GEO Series GSE308486. Homo sapiens. 6 samples. Type: Other.
Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II
GEO Series GSE240102. Medicago truncatula. 20 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic signatures of cardiac sarcoidosis
GEO Series GSE314910. Homo sapiens. 12 samples. Type: Other.
Spatially resolved whole-transcriptomic and proteomic profiling of lung cancer and immune-microenvironment according to PD-L1 expression
GEO Series GSE265899. Homo sapiens. 95 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of fixed tissue micro-regions using Pick-Seq [breast]
GEO Series GSE158561. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level
GEO Series GSE255371. Mus musculus. 86 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-Cell Spatial Transcriptomics Unveils Platelet-Fueled Cycling Macrophages for Kidney Fibrosis
GEO Series GSE271934. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Xenium-based spatial transcriptomics of brains following chronic plastic exposure
GEO Series GSE291378. Mus musculus. 3 samples. Type: Other.
Scar-associated endothelial-stellate cellular crosstalk drives fibrosis resolution in MASH [Spatial Transcriptomics]
GEO Series GSE306327. Mus musculus. 2 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.