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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics]
GEO Series GSE290324. Mus musculus. 7 samples. Type: Other.
Spatial transcriptomics reveals functional compartmentalization of the lung tissue of OP patient
GEO Series GSE250385. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell RNA sequencing and spatial transcriptomics reveal the osteoimmune microenvironment of biomaterial-mediated bone regeneration [ST-seq]
GEO Series GSE246096. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell and spatial transcriptomics identify COL6A3 as a prognostic biomarker in undifferentiated pleomorphic sarcoma
GEO Series GSE281529. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics
GEO Series GSE157299. Homo sapiens; Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Deciphering hypoxia related glioblastoma-associated macrophages and predicting prognostic markers by single-cell, spatially-resolved transcriptomics and experimental analysis
GEO Series GSE251908. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic studies of the colon from a wildtype mouse
GEO Series GSE210973. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing and spatial transcriptomics reveal the osteoimmune microenvironment of biomaterial-mediated bone regeneration
GEO Series GSE246476. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Human prostate luminal epithelia adopt a club-like state in response to low androgen levels (spatial and single-cell transcriptomics)
GEO Series GSE179615. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of bladder cancer with squamous differentiation
GEO Series GSE299573. Homo sapiens. 1 samples. Type: Other.
Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer
GEO Series GSE311294. Homo sapiens. 5 samples. Type: Other.
Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state
GEO Series GSE313636. Mus musculus. 4 samples. Type: Other.
Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[bulk RNA-seq]
GEO Series GSE255368. Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.
CosMX spatial transcriptomics of mouse subcutaneous EO771 tumors to study synergistic effects of NEDD8 depletion and anti-PD-1 therapy
GEO Series GSE318797. Mus musculus. 2 samples. Type: Other.
Spatial transcriptome sequencing of chicken and duck beaks
GEO Series GSE310129. Gallus gallus; Anas platyrhynchos. 3 samples. Type: Other.
Spatial transcriptomics of fixed tissue micro-regions using Pick-Seq [melanoma]
GEO Series GSE158562. Homo sapiens. 75 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptome for investigating tumor microenvironment remodeling mediated by a chimeric oncolytic adenovirus combined with PD-1 antibody
GEO Series GSE185610. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression
GEO Series GSE250521. Homo sapiens. 25 samples. Type: Expression profiling by high throughput sequencing; Other.
Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis [CosMx]
GEO Series GSE277441. Homo sapiens. 3 samples. Type: Other.
Generation of human neuromusculoskeletal tri-tissue organoids [Spatial Transcriptomics]
GEO Series GSE248230. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.