Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,478
datasets available to search
ShareScore release 0.7.1
Dataset results
1,478 results for “coral reefs”
Figure 24 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 24. Favia, Diploria, and Pseudodiploria microstructure (transverse thin section): left column, whole corallite; middle column, wall; right column, columella. Favia, Diploria, and Pseudodiploria all have septothecal walls (w). In Pseudodiploria, there are also trabeculothecal components, and Pseudodiploria strigosa has abortive septa. Clusters of calcification centres (c) are well defined in Favia, moderately well defined in Diploria, and weak in Pseudodiploria; however, Pseudodiploria has better defined medial lines. Carinae are well developed in Favia, but not in the other two genera; thickening deposits are moderately developed in all three genera. A–C, Favia fragum (Esper, 1795); figured specimen = SUI122816 (FA1065), Bocas del Toro, Panama. D–F, Favia gravida (Verrill, 1868); figured specimen = YPM9085, Rio Formoso, Pernambuco, Brazil. G–I, Diploria labyrinthiformis (Linnaeus, 1758); figured specimen = SUI122810 (FA1061), Bocas del Toro, Panama. J–L, Pseudodiploria strigosa (Dana, 1846); figured specimen = SUI122813 (FA1062), Bocas del Toro, Panama. M–O, Pseudodiploria clivosa (Ellis & Solander, 1786); figured specimen = SUI122807 (FA1060), Bocas del Toro, Panama.
Figure 25 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 25. Colpophyllia, Manicina, and Mussismilia microstructure (transverse thin section): left column, wall; middle column, corallite interior; right column, close-up of septa. Corallite walls (w) in Colpophyllia and Mussismilia are parathecal; whereas in Manicina they are septothecal with trabeculothecal elements. Trabeculothecal elements are also present in Mussismilia braziliensis and to a lesser extent in Mussismilia leptophylla. Moderately well-defined costoseptal medial lines (m) and well-developed carinae (cr) occur in all three genera. A–C, Colpophyllia natans (Houttuyn, 1772); figured specimen = SUI122802 (FA (FA1071), Bocas del Toro, Panama (A); SUI122804 (FA1100, J115), Discovery Bay, Jamaica (B, C). D–F, Manicina areolata (Linnaeus, 1758); figured specimen = SUI122822 (FA1067), Bocas del Toro, Panama. G–I, Mussismilia hartti (Verrill, 1868); figured specimen = YPM4516, Maria Farinha, Pernambuco, Brazil. J–L, Mussismilia braziliensis (Verrill, 1868); figured specimen = YPM9104, Santa Barbara Island, Abrolhos Archipelago, Bahia, Brazil. M–O, Mussismilia leptophylla (Verrill, 1868); holotype = YPM1517A, Abrolhos Reef, Abrolhos Archipelago, Bahia, Brazil.
Figure 22 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 22. Mussa and Scolymia microstructure (transverse thin section): left column, wall; middle column, mid-septum; right column, close-up of clusters. Both Mussa and Scolymia have parathecal walls (w); however, trabeculothecal elements and thickening deposits are better developed in Scolymia. Both genera form well-developed clusters of calcification centres (c) that cross medial lines. These clusters are more closely spaced in Scolymia. A–C, Mussa angulosa (Pallas, 1766); figured specimen = SUI102761 (FA1012), Bocas del Toro, Panama. D-F, Scolymia lacera (Pallas, 1766); figured specimen = USNM1090899, Bahia Concha, Colombia. G–I, Scolymia cubensis (Milne Edwards & Haime, 1849); figured specimen = USNM84939, Maria Buena Bay, Jamaica. J–L, Scolymia wellsi (Laborel, 1967); figured specimen = USNM84926, Angel Reef, Tobago.
Figure 23 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 23. Isophyllia and Mycetophyllia microstructure (transverse thin section): left column, wall; middle column, mid-septum; right column, close-up of clusters. Both Isophyllia and Mycetophyllia have parathecal walls (w) with trabeculothecal elements, well-developed clusters of calcification centres (c) that cross medial lines, and reduced thickening deposits. A–C, Isophyllia sinuosa (Ellis & Solander, 1786); figured specimen = SUI102757 (FA1014), Bocas del Toro, Panama. D–F, Isophyllia rigida (Dana, 1846); figured specimen = SUI102752 (FA1009), Bocas del Toro, Panama. G–I, Mycetophyllia lamarckiana (Milne Edwards & Haime, 1849); figured specimen = SUI102773 (FA1133), Discovery Bay, Jamaica. J–L, Mycetophyllia aliciae (Wells, 1973); figured specimen = SUI102768 (FA1005), Bocas del Toro, Panama. M–O, Mycetophyllia danaana? (Milne Edwards & Haime, 1849); figured specimen = SUI102771 (FA1002), Bocas del Toro, Panama.
Figure 21 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 21. Colpophyllia, Manicina, and Mussismilia micromorphology (scanning electron microscopy): left column, wall; middle column, mid-septum; right column, columella. Colpophyllia, Manicina, and Mussismilia have paddle-shaped to tricorne teeth with elliptical bases orientated perpendicular to the septal plane. Tooth height is low (<0.3 mm) in Colpophyllia and Manicina, and medium to high (> 0.3 mm) in Mussismilia. The interarea of teeth is smooth in Manicina but horizontally banded in Colpophyllia and Mussismilia. Granules are spiked and aligned. A–C, Colpophyllia natans (Houttuyn, 1772); figured specimens = SUI122804 (FA1100) Discovery Bay, Jamaica (A); SUI122802 (FA1071), Bocas del Toro, Panama (B, C). D–F, Manicina areolata (Linnaeus, 1758); figured specimen = SUI122824 (FA1107), Bocas del Toro, Panama. G–I, Mussismilia hartti (Verrill, 1868); figured specimen = YPM4516, Maria Farinha, Pernambuco, Brazil. J–L, Mussismilia braziliensis (Verrill, 1868); figured specimen = YPM9104, Santa Barbara Island, Abrolhos Archipelago, Bahia, Brazil. M–O, Mussismilia leptophylla (Verrill, 1868); figured specimen = SUI99645 (FA1029), Abrolhos Reef, Abrolhos Archipelago, Bahia, Brazil (M); YPM9087, Lixa Reef, Abrolhos Archipelago, Bahia, Brazil. (N, O).
Figure 20 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 20. Favia, Diploria, and Pseudodiploria micromorphology (scanning electron microscopy): left column, wall; middle column, mid-septum; right column, columella. Favia, Diploria, and Pseudodiploria have paddle-shaped to tricorne teeth with elliptical bases orientated perpendicular to the septal plane. The interarea of teeth is smooth, and granules are spiked and aligned. Teeth in different septal cycles differ slightly in Favia, but are equal in Diploria and Pseudodiploria. A–C, Favia fragum (Esper, 1795); figured specimen = SUI122816 (FA1065), Bocas del Toro, Panama. D–F, Favia gravida (Verrill, 1868); figured specimen = YPM4518, Rio Grande Do Norte State, Fernando de Noronha Archipelago, Brazil. G–I, Diploria labyrinthiformis (Linnaeus, 1758); figured specimen = SUI122810 (FA1061), Bocas del Toro, Panama. J–L, Pseudodiploria strigosa (Dana, 1846); figured specimens = SUI122813 (FA1062), Bocas del Toro, Panama (J, K); SUI122815 (FA1103), Discovery Bay, Jamaica (L). M–O, Pseudodiploria clivosa (Ellis & Solander, 1786); figured specimen = SUI122807 (FA1060), Bocas del Toro, Panama.
Figure 7 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 7. Strict and Adams consensus trees for the morphological phylogenetic analysis (maximum parsimony) focusing on clades XIX and XXI (analysis 1). Numbers above and below nodes are bootstrap values (> 50) and Bremer support values (> 1), respectively. C.I., consistency index; MPTs, most parsimonious trees; R.I., retention index.
Figure 17 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 17. Mussismilia macromorphology. Mussismilia is phaceloid or subplocoid (one to three centres), with a distinctive double wall when coenosteum is present. The columella is continuous with trabecular linkage between centres. Species of Mussismilia differ in colony form and calice size. A, B, Mussismilia hartti (Verrill, 1868); figured specimen = YPM4516, Maria Farinha, Pernambuco, Brazil. C, D, Mussismilia braziliensis (Verrill, 1868); holotype = YPM1467, Abrolhos Reef, Abrolhos Archipelago, Bahia, Brazil. E, F, Mussismilia hispida (Verrill, 1901); holotype = YPM4287, Abrolhos Reef, Abrolhos Archipelago, Bahia, Brazil. G, H, Mussismilia leptophylla (Verrill, 1868); holotype = YPM1517A, Abrolhos Reef, Abrolhos Archipelago, Bahia, Brazil.
Figure 14 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 14. Mycetophyllia macromorphology. Mycetophyllia is distinguished by long, uniserial or multiserial valleys (absent in Mycetophyllia reesi); confluent septa; no coenosteum; and lamellar linkage between centres. The five species differ in colony form, especially the structure of valleys and collines. A, B, Mycetophyllia lamarckiana (Milne Edwards & Haime, 1849); figured specimen = SUI102774 (FA1138), Red Buoy, Discovery Bay, Jamaica. C, D, Mycetophyllia aliciae Wells, 1973; holotype = USNM53496, The Bull, Discovery Bay, Jamaica. E, F, Mycetophyllia danaana (Milne Edwards & Haime, 1849); neotype (designated herein) = SUI102772 (FA1003), Bocas del Toro, Panama. G, H, Mycetophyllia ferox Wells, 1973; holotype = USNM53494, Eaton Hall, Jamaica. I, J, Mycetophyllia reesi Wells, 1973; holotype = USNM53493, West Bull, Jamaica.
Figure 3 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 3. Phylogenetic character mapping of representative micromorphological characters on a subset (clades XV to XXI) of the molecular tree of Fukami et al. (2008). Clade XV is composed of Diploastrea heliopora, and clade XVI is composed of Montastraea cavernosa; clades XVII to XXI are indicated. Ancestral states have been reconstructed using parsimony and calculated using MESQUITE v. 2.72 (Maddison & Maddison, 2009); equivocal branches are indicated in grey. Character states are given in Table 3. A, tooth base; B, tooth tips; C, tooth height; D, granule shape and distribution. Additional micromorphological character maps are in Appendix S6.
Figure 19 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 19. Isophyllia and Mycetophyllia micromorphology (scanning electron microscopy): left column, wall; middle column, mid-septum; right column, columella. Isophyllia and Mycetophyllia have high (> 0.6 mm), widely spaced (1–2 mm), spine-shaped teeth; a horizontally layered interarea of septal teeth; and fine granules on the sides of teeth. A–C, Isophyllia sinuosa (Ellis & Solander, 1786); figured specimen = SUI102757 (FA1014), Bocas del Toro, Panama. D–F, Isophyllia rigida (Dana, 1846); figured specimen = SUI102753 (FA1074), Bocas del Toro, Panama. G–I, Mycetophyllia lamarckiana (Milne Edwards & Haime, 1849); figured specimen = SUI102773 (FA1133), Discovery Bay, Jamaica. J–L, Mycetophyllia aliciae (Wells, 1973); figured specimen = SUI102769 (FA1006), Bocas del Toro, Panama. M–O, Mycetophyllia danaana? (Milne Edwards & Haime, 1849); figured specimen = SUI102771 (FA1002), Bocas del Toro, Panama.
Figure 6 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 6. Microstructural differences amongst the three major clades (XXI, XIX, XVII). All photos are of transverse thin sections at the same scale. The radiating linear plates are costosepta, which are connected in different ways to form corallite walls. Clade XXI (A-C) has costoseptal medial lines that are crossed by transverse structures (tc) such as carinae or clusters of calcification centres; corallite walls are predominantly either septothecal (Favia + Diploria + Pseudodiploria + Manicina subgroup) or parathecal. Clade XIX (D-F) is distinguished by well-developed thickening deposits (tk) and parathecal corallite walls, and widely spaced clusters of calcification centres. Clade XVII (G-H) is distinguished by small, closely spaced clusters of calcification centres (cl); wall structures range the gamut, and appear to be diagnostic of genus-level subclades. A, XXI, Favia fragum, FA1065, SUI122816, Bocas del Toro, Panama, Atlantic. B, XXI, Mussismilia hartti, YPM4516, Maria Farinha, Brazil, Atlantic. C, XXI, Isophyllia rigida, FA1009, SUI102752, Bocas del Toro, Panama, Atlantic. D, XIX, Lobophyllia pachysepta, USNM45515, Murray Island, Australia, Indo-Pacific. E, XIX, Homophyllia australis, USNM85709, Blyth Island, Australia, Indo-Pacific. F, XIX, Oxypora lacera, USNM93809, Madang, Papua New Guinea, Indo-Pacific. G, XVII, Merulina ampliata, UF2051, Palau, Indo-Pacific. H, XVII, Favites halicora, USNM90627, Philippines, Indo-Pacific. I, XVII, Hydnophora exesa, USNM83232, Marshall Islands, Indo-Pacific.
Figure 11 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 11. Type specimens of type species of genera in the subfamily Faviinae. A, B, genus Manicina Ehrenberg, 1834; Madrepora areolata Linnaeus, 1758; neotype (designated herein) = ZMB-Cni673, St. Thomas, US Virgin Islands. C–F, genus Mussismilia Ortmann, 1890; Mussa harttii Verrill, 1868; lectotype in two pieces (designated herein) = YPM1468a, Abrolhos Reef, Abrolhos Archipelago, Bahia, Brazil. G, H, genus Pseudodiploria Fukami, Budd & Knowlton, new genus; Meandrina strigosa Dana, 1846; holotype = USNM00005, West Indies.
Figure 5 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 5. Phylogenetic character mapping of representative microstructural characters on a subset (clades XV to XXI) of the molecular tree of Fukami et al. (2008). Clade XV is composed of Diploastrea heliopora, and clade XVI is composed of Montastraea cavernosa; clades XVII to XXI are indicated. Ancestral states have been reconstructed using parsimony and calculated using MESQUITE v. 2.72 (Maddison & Maddison, 2009); equivocal branches are indicated in grey. Character states are given in Table 3. A, septotheca; B, paratheca; C, thickening deposits/structure; D, costoseptum centre clusters. Additional microstructural character maps are in Appendix S7.
Figure 18 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 18. Mussa and Scolymia micromorphology (scanning electron microscopy): left column, wall; middle column, mid-septum; right column, columella. Both Mussa and Scolymia have high, spine-shaped teeth. Mussa is distinguished by thinner septa, and a distinctively horizontally layered interarea. The columellae of Scolymia have thick, paddle-shaped teeth, in comparison to the thinner platy teeth of Mussa. A–C, Mussa angulosa (Pallas, 1766); figured specimen = SUI102761 (FA1012), Bocas del Toro, Panama. D–F, Scolymia lacera (Pallas, 1766); figured specimen = USNM84920, Discovery Bay, Jamaica. G–I, Scolymia cubensis (Milne Edwards & Haime, 1849); figured specimens = USNM84940, Maria Buena Bay, Jamaica (G, H); SUI102777 (FA1097, SCUB16), Bocas del Toro, Panama (I). J–L, Scolymia wellsi (Laborel, 1967); figured specimen = USNM84926, Angel Reef, Tobago.
Figure 4 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 4. Micromorphological differences amongst the three major clades (XXI, XIX, XVII). The vertically oriented plates shown in each photo are septa. The projections along their upper margins are teeth, and those across their lateral faces are granules. Clade XXI (A-C) is distinguished by regular blocky teeth with pointed tips, and aligned granules. Clade XIX (D-F) is distinguished by irregular lobate or bulbous teeth with elliptical tooth bases, and rounded granules enveloped by extensive thickening deposits. Clade XVII (G-I) is distinguished by irregular multiaxial teeth with circular bases, and irregular scattered granules. A, XXI, Pseudodiploria strigosa, FA1062, SUI122813, Bocas del Toro, Panama, Atlantic. B, XXI, Mussismilia braziliensis, YPM9104, Abrolhos Archipelago, Brazil, Atlantic. C, XXI, Isophyllia sinuosa, FA1014, SUI102757, Bocas del Toro, Panama, Atlantic. D, XIX, Lobophyllia pachysepta, USNM45515, Murray Island, Australia, Indo-Pacific. E, XIX, Parascolymia vitiensis, USNM91254, Great Palm Island, Australia, Indo-Pacific. F, XIX, Echinophyllia echinoporoides, FA1023, UF2103, Palau, Indo-Pacific. G, XVII, Merulina ampliata, FA1033, USNM100519, Madagascar, Indo-Pacific. H, XVII, Favites halicora, USNM91305, Malaysia, Redang Island, Indo-Pacific. I, XVII, Hydnophora exesa, FA1068, UF2143, Palau, Indo-Pacific.
Figure 9 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 9. Type specimens of type species of genera in the subfamily Mussinae. A, B, genus Mussa Oken, 1815; Madrepora angulosa Pallas, 1766; neotype (designated herein) = YPM9035, Lime Cay, Port Royal, Jamaica. C, D, genus Isophyllia Milne Edwards & Haime, 1851a; Oulophyllia? spinosa Milne Edwards & Haime, 1849 [= Isophyllia sinuosa (Ellis & Solander)]; holotype = MNHN-scle866, unknown locality. E, F, genus Mycetophyllia Milne Edwards & Haime, 1848; Mycetophyllia lamarckiana Milne Edwards & Haime, 1849; holotype = MNHN-scle910, unknown locality. G, H, genus Scolymia Haime, 1852; Madrepora lacera Pallas, 1766; neotype (designated herein) = YPM9036, Rio Bueno, Jamaica.
Figure 2 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 2. Phylogenetic character mapping of representative macromorphological characters on a subset (clades XV to XXI) of the molecular tree of Fukami et al. (2008). Clade XV is composed of Diploastrea heliopora, and clade XVI is composed of Montastraea cavernosa; clades XVII to XXI are indicated. Ancestral states have been reconstructed using parsimony and calculated using MESQUITE v. 2.72 (Maddison & Maddison, 2009); equivocal branches are in grey. Character states are given in Table 3. A, extracalicular budding; B, corallite integration; C, corallite centre linkage; D, epitheca. Additional macromorphological character maps are in Appendix S5.
Figure 1 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 1. Phylogenetic relationships amongst scleractinian corals. Topology was inferred by Bayesian analysis, based on combined mitochondrial cox1 and cob DNA sequences. Numbers on main branches show percentages of Bayesian probability (> 70%) and bootstrap values (> 50%) in maximum likelihood analysis. Three-letter codes correspond with traditional families; numbers in Roman numerals indicate clades interpreted from the tree. A, outgroups; B, complex corals and corallimorpharians; C, the family Pocilloporidae; D, robust corals. Connections among trees A–D are indicated by numbers in circles. After Fukami et al. (2008: 3).
Figure 8 in Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
Figure 8. Strict and Adams consensus trees for the more inclusive morphological phylogenetic analysis (maximum parsimony) involving clades XVII, XIX, and XXI (analysis 2). Numbers above and below nodes are bootstrap values (> 50) and Bremer support values (> 1), respectively. C.I., consistency index; MPTs, most parsimonious trees; R.I., retention index.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.