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Figure 11 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 11 - Neighbour-joining tree of COI sequence divergences (K2P model) of studied Chilopoda. Asterisks: Deep divergences within Lithobius tricuspis and Lithobius mutabilis suggesting cryptic speciation. Numbers above and below branches show bootstrap values of neighbour-joining analysis, branch length indicates sequence divergence in %.
Figure 7 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 7 - Complete neighbour-joining tree of COI sequence divergences (K2P model) of studied myriapod orders; barcoded terminal taxa and clades above their basal nodes omitted. This tree serves for orientation in the detailed trees given in Figs 8–11.
Figure 1 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 1 - Map of sampled areas (dots). For checks of intraspecific variability of COI sequences, localities in Bavaria, but also elsewhere within the species' areas of distribution, have been sampled and analyzed (sampling data from November 2008 to November 2010; a few specimens from northern Spain omitted).
Figure 2 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 2 - Some Bavarian myriapods for which barcodes are now available. A. Glomeris pustulata Latreille, 1804. B. Polydesmus helveticus Verhoeff, 1894. C. Cylindroiulus boleti (C. L. Koch, 1847). D. Unciger foetidus (C. L. Koch, 1838). E. Haasea flavescens (Latzel, 1884). F. Atractosoma meridionale Fanzago, 1876. G. Cryptops parisi Brölemann, 1920. H. Henia vesuviana (Newport, 1845). Photos: J. Spelda.
Figure 10 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 10 - Neighbour-joining tree of COI sequence divergences (K2P model) of studied Chordeumatida. Asterisk: deep barcoding divergence in Chordeuma silvestre; solid squares: polyphyly of genus Ochogona; arrows: low sequence divergences in the genera Craspedosoma, Listrocheiritium and Rhymogona. Numbers above and below branches show bootstrap values of NJ analysis, branch length indicates sequence divergence in %.
Figure 1 from: Renner S, Pandey A (2013) The Cucurbitaceae of India: Accepted names, synonyms, geographic distribution, and information on images and DNA sequences. PhytoKeys 20: 53-118. https://doi.org/10.3897/phytokeys.20.3948
Figure 1 - Tribal classification of the Cucurbitaceae with native Indian genera highlighted in red, cultivated ones in blue. Modified from Schaefer and Renner (2011a, b).
Figure 4 from: Espinasa L, D. Bartolo N, E. Newkirk C (2014) DNA sequences of troglobitic nicoletiid insects support Sierra de El Abra and the Sierra de Guatemala as a single biogeographical area: Implications for Astyanax. Subterranean Biology 13: 35-44. https://doi.org/10.3897/subtbiol.13.7256
Figure 4 - The Boquillas River has changed its course throughout time. The Boquillas River currently separates the karstic areas of Sierra de Guatemala from the Sierra the El Abra. In the upper part of the figure, the Boquillas River is seen crossing the sierras through the Servilleta canyon. On the bottom part of the figure, a fossil canyon indicates the river's ancient course. Caves that in the past connected the Sierra de El Abra in the south to the Sierra de Guatemala in the north were only recently geologically truncated by the erosion of the new river course. Limestone is restricted to the green forested hills.
Figure 3 from: Espinasa L, D. Bartolo N, E. Newkirk C (2014) DNA sequences of troglobitic nicoletiid insects support Sierra de El Abra and the Sierra de Guatemala as a single biogeographical area: Implications for Astyanax. Subterranean Biology 13: 35-44. https://doi.org/10.3897/subtbiol.13.7256
Figure 3 - Base pair differences versus estimates of divergence in nicoletiids. Base pair differences in the 16S rRNA fragment is plotted against estimates of divergence times millions of years ago (Mya). Molecular clock calibrating points were extracted from: a populations of Anelpistina musticensis that got separated into different islands when the sea level rose after glacial times 12,000 years ago (Espinasa et al. 2011) b and c species of Prosthecina and d species of Anelpistina from Baja California that got separated from the mainland species when the Gulf of Cortes formed 5 mya (Espinasa et al. 2009) e time when nicoletiids arose from a common ancestor with Lepismatids 302 mya (Regier et al. 2010), and f time when insects arose from a common ancestor with anostraca in the Silurian-Ordovician boundary 427 mya (Gaunt and Miles 2002). The lower arrow indicates the 11–12 bp differences between the Sierra de Guatemala and the Sierra de El Abra Anelpistina populations. Such sequence difference is consistent with a common origin very recently, less than 12,000 years ago, and therefore after the environmental disturbances of the ice age.
Figure 2 from: Espinasa L, D. Bartolo N, E. Newkirk C (2014) DNA sequences of troglobitic nicoletiid insects support Sierra de El Abra and the Sierra de Guatemala as a single biogeographical area: Implications for Astyanax. Subterranean Biology 13: 35-44. https://doi.org/10.3897/subtbiol.13.7256
Figure 2 - Anelpistina quinterensis is one of the most troglomorphic described species of nicoletiids. This relatively large eyeless insect is albino and has extremely elongated appendages. Its habitat is restricted to very humid portions of the caves such as mud banks. It is doubtful that it can survive in an epigean environment. Its habitat probably reflects connectivity within a karstic area throughout geologic times and during the evolutionary history of the species.
Figure 1 from: Espinasa L, D. Bartolo N, E. Newkirk C (2014) DNA sequences of troglobitic nicoletiid insects support Sierra de El Abra and the Sierra de Guatemala as a single biogeographical area: Implications for Astyanax. Subterranean Biology 13: 35-44. https://doi.org/10.3897/subtbiol.13.7256
Figure 1 - The Cañon de la Servilleta of the River Boquillas separates the contiguous Sierra de Guatemala, to the north, from the Sierra de El Abra, in the south. Limestone is restricted to the green forested hills. This study tested if this 100 m high, 100 m wide canyon was an effective biological barrier that prevented underground migration of troglobites between the two karstic areas.
Figure 9 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 9 - Drawings of the preserved DNA voucher tadpole of Boophis sibilans (FGZC 2956-ZSM 1631/2007): A Dorsal view B Lateral view C Oral disc.
Figure 7 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 7 - Drawings of the preserved DNA voucher tadpole of Boophis schuboeae (FG/MV 2003.1800-ZSM 978/2004): A Dorsal view B Lateral view C Oral disc.
Figure 8 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 8 - Drawings of the preserved DNA voucher tadpole of Boophis albipunctatus (ZCMV 4946-ZSM 82/2008): A Dorsal view B Lateral view C Oral disc.
Figure 6 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 6 - Drawings of the preserved DNA voucher tadpole of Boophis ankaratra (ZCMV 4917-ZSM 876/2007): A Dorsal view B Lateral view C Oral disc.
Figure 5 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 5 - Drawings of the preserved DNA voucher tadpole of Boophis andohahela (T 428-ZSM 998/2007): A Dorsal view B Lateral view C Oral disc.
Figure 4 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 4 - Drawings of the preserved DNA voucher tadpole of Boophis englaenderi [Ca23](FGZC 2957-ZSM 1632/2007): A Dorsal view B Lateral view C Oral disc.
Figure 3 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 3 - Drawings of the preserved DNA voucher tadpole of Boophis englaenderi (FGZC 2244-ZSM 623/2008): A Dorsal view B Lateral view C Oral disc.
Figure 26 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 26 - Tadpole distribution across the eight microhabitats (defined using water current and stream substrat) of the three most abundant strongly rheophilous Boophis that were sampled in Ranomafana National Park in wet season 2008. Boophis andohahela: N=8 , Boophis marojezensis [Ca51]: N=7, Boophis luciae N=10 with N= the number of streams.
Figure 28 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 28 - Pictures showing tadpole capture sites inside a primary forest in Ranomafana National Park (A in Fompohonina river, B in Piste E 100 stream), and outside the forest (C in Anjingo river and D in Ankijagna Lagnana).
Figure 23 from: Randrianiaina R, Strauss A, Glos J, Vences M (2012) Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology. ZooKeys 178: 59-124. https://doi.org/10.3897/zookeys.178.1410
Figure 23 - Drawings of the preserved DNA voucher tadpole of Boophis marojezensis [Ca53](ZCMV 13200-ZSM 573/2010): A Dorsal view B Lateral view C Oral disc.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.