Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,118
datasets available to search
ShareScore release 0.9.0
Dataset results
1,118 results for “Time series”
Time-series of transcriptome analysis of Bacillus subtilis response to 3 mM potassium sorbate
GEO Series GSE9823. Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168. 6 samples. Type: Expression profiling by array.
Analysis of Wild Type and Siah2 KO time series liver transcriptome from male and female mice [ZT 10]
GEO Series GSE182835. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
The time-series gene expression data in PMA stimulated THP-1
GEO Series GSE15528. Homo sapiens. 10 samples. Type: Expression profiling by RT-PCR.
Global Monthly and Seasonal Urban and Land Backscatter Time Series, 1993-2020
The Global Monthly and Seasonal Urban and Land Backscatter Time Series, 1993-2020, is a multi-sensor, multi-decadal, data set of global microwave backscatter, for 1993 to 2020. It assembles data from C-band sensors onboard the European Remote Sensing Satellites (ERS-1 and ERS-2) covering 1993-2000, Advanced Scatterometer (ASCAT) onboard EUMETSAT satellites for 2007-2020, and the Ku-band sensor onboard the QuikSCAT satellite for 1999-2009, onto a common spatial grid (0.05 degree latitude /longitude resolution) and time step (both monthly and seasonal). Data are provided for all land (except high latitudes and islands), and for urban grid cells, based on a specific masking that removes grid cells with > 50% open water or < 20% built land. The all-land data allows users to choose and evaluate other urban masks. There is an offset between C-band and Ku-band backscatter from both vegetated and urban surfaces that is not spatially constant. There is a strong linear correlation (overall R-squared value = 0.69) between 2015 ASCAT urban backscatter and a continental-scale gridded product of building volume, across 8,450 urban grid cells (0.05 degree resolution) from large cities in Europe, China, and the United States.
Hawaii Ocean Time-series (HOT) Program
Scientists working on the Hawaii Ocean Time-series (HOT) program have been making repeated observations of the hydrography, chemistry and biology of the water column at a station north of Oahu, Hawaii since October 1988. The objective of this research is to provide a comprehensive description of the ocean at a site representative of the North Pacific subtropical gyre. Cruises are made approximately once per month to the deep-water Station ALOHA (A Long-Term Oligotrophic Habitat Assessment) located 100 km north of Oahu, Hawaii. Measurements of the thermohaline structure, water column chemistry, currents, optical properties, primary production, plankton community structure, and rates of particle export are made on each cruise.
Global Population Count Grid Time Series Estimates
The Global Population Count Grid Time Series Estimates provide a back-cast time series of population grids based on the year 2000 population grid from SEDAC's Global Rural-Urban Mapping Project, Version 1 (GRUMPv1) data set. The grids were created by using rates of population change between decades from the coarser resolution History Database of the Global Environment (HYDE) database to back-cast the GRUMPv1 population count grids. Mismatches between the spatial extent of the HYDE calculated rates and GRUMPv1 population data were resolved via infilling rate cells based on a focal mean of values. Finally, the grids were adjusted so that the population totals for each country equaled the UN World Population Prospects (2008 Revision) estimates for that country for the respective year (1970, 1980, 1990, and 2000). These data do not represent census observations for the years prior to 2000, and therefore can at best be thought of as estimations of the populations in given locations. The population grids are consistent internally within the time series, but are not recommended for use in creating longer time series with any other population grids, including GRUMPv1, Gridded Population of the World, Version 4 (GPWv4), or non-SEDAC developed population grids. These population grids served as an input to SEDAC's Global Estimated Net Migration Grids by Decade: 1970-2000 data set.
Latin America and the Caribbean Population Time Series
The Latin America and the Caribbean Population Time Series data set provides total population estimates using spatially consistent and comparable Units for Latin American municipalities or equivalent administrative Units for the years 1990 and 2000. The data set consists of two vector polygon layers: one layer displays population estimates for subnational administrative Units in 1990 and 2000, including population counts, density, and percent change, at the municipality level or equivalent (level 2); a second layer summarizes this information at the country level (level 0).
Satellite Laser Ranging products International Terrestrial Reference Frame (ITRF2020) Station Positions and Earth Orientation Parameters (EOP) Time Series (REPRO2020) from NASA CDDIS
“The ILRS contribution to ITRF2020 consists of a pair of time series of weekly and bi-weekly station position estimates along with daily and 3-day averaged Earth Orientation Parameters (X-pole, Y-pole and excess Length-Of-Day (LOD)) estimated over 7-day arcs (1993.0 – 2021.0) and 15-day arcs for the period 1983.0-1993.0, aligned to the calendar weeks (Sunday to Saturday), starting from January 1983. Each solution is obtained through the combination of loosely constrained weekly/biweekly solutions submitted by each of the seven official ILRS Analysis Centers. Both, the individual and combined solutions have followed strict standards agreed upon within the ILRS Analysis Standing Committee (ASC) to provide ITRS products of the highest possible quality.” (The ILRS contribution to ITRF2020, E. C. Pavlis (GESTAR II/UMBC & NASA Goddard 61A) and V. Luceri (e-GEOS S.p.A., ASI/CGS))
Chlorophyll time series, Department of Fisheries and Oceans (DFO), Canada
This time series of chl data was obtained from the BioChem archive run by the Department of Fisheries and Oceans, Canada. Water sampling and chlorophyll analysis methods are described in the Mitchell et al. (2002) protocol document accompanying the data.DFO (2014). BioChem: database of biological and chemical oceanographic data. Department of Fisheries and Oceans, Canada.http://isdm.gc.ca/biochem/biochem-eng.htm
CDDIS MEaSUREs SESES products Change in Water Storage Time Series
Making Earth System Data Records for Use in Research Environments (MEaSUREs) empowers the research community to participate in developing and generating data products that complement and augment NASA produced and distributed Earth science data products. NASA’s Enhanced Solid Earth Science Earth Science Data Record (ESDR) System (ESESES) continues and extends mature geodetic data product generation and archival as part of the MEaSUREs SESES project providing new, multi-decade, calibrated and validated geodetic-derived ESDRs obtained by the Scripps Institution of Oceanography (SIO) and NASA's Jet Propulsion Laboratory (JPL). These data-derived products include continuous multi-year high-rate GNSS, seismogeodetic, and meteorological time series, a catalog of transient deformation in tectonically active areas known for aseismic motion such as ETS with focus in Cascadia, and continuous estimation and cataloging of total near-surface water content derived from continuous GNSS time series over the continental U.S. These data products are grids of changes in total water storage over the continental U.S.; continuous estimation and cataloging of total near-surface water content derived from continuous GNSS time series over the continental U.S.
Leveraging the Hawaii Ocean Time-series program for validation of the PACE Mission in oligotrophic waters
In this project, we leverage the near-monthly, 5-day long expeditions to oligotrophic waters approximately 100 km from Oahu, Hawaii, conducted by the Hawaii Ocean Time-series (HOT) program. We will participate in ~30 HOT cruises across all seasons over a 3-year period, amounting to ~ 150 days of high-quality collection of a suite of essential parameters for PACE Mission validation.
CDDIS MEaSUREs SESES products weekly displacement grids time series
Making Earth System Data Records for Use in Research Environments (MEaSUREs) empowers the research community to participate in developing and generating data products that complement and augment NASA produced and distributed Earth science data products. NASA’s Enhanced Solid Earth Science Earth Science Data Record (ESDR) System (ESESES) continues and extends mature geodetic data product generation and archival as part of the MEaSUREs SESES project providing new, multi-decade, calibrated and validated geodetic-derived ESDRs obtained by the Scripps Institution of Oceanography (SIO) and NASA's Jet Propulsion Laboratory (JPL). These data-derived products include continuous multi-year high-rate GNSS, seismogeodetic, and meteorological time series, a catalog of transient deformation in tectonically active areas known for aseismic motion such as ETS with focus in Cascadia, and continuous estimation and cataloging of total near-surface water content derived from continuous GNSS time series over the continental U.S.
Gulf of Maine North Atlantic Time Series (GNATS)
The Gulf of Maine (GoM) is a highly productive shelf sea that constitutes a large part of the N.E. US Continental Shelf. We have run a time series across the GoM for the last 8 years known as GNATS (Gulf of Maine North Atlantic Time Series). It consists of monthly, cross-Gulf sampling on ships of opportunity, during clear-sky days, so that we are assured concurrent measurements from ship and satellite (ocean color, SST). The power of this strategy is seen in our 95% success rate for being at sea during clear, high quality overpasses (randomly, one would expect a success rate of ~10% due to the GoM cloud climatology). We then can extrapolate our large shipboard data set of carbon cycle parameters to regional scales using synoptic remote sensing. GNATS includes a suite of carbon-specific standing stocks and rate measurements (e.g. POC, PIC [calcite], DOC, primary productivity, and calcification) plus hydrographic, chemical and optical measurements. Through coordinated ship/satellite measurements, we can constrain the major carbon production terms of the Gulf, follow their monthly variation using synoptic remote sensing, and regionally tune satellite algorithms. GNATS documents not only marine carbon pools, but it includes carbon supplied from the terrestrial watershed; this is why the Gulf is optically-dominated by Case II waters. We propose to A) continue GNATS, coordinated ship and satellite measurements for another 3 years, B) provide monthly, regional estimates of the standing stock and production terms for the various particulate and dissolved carbon fractions based on satellite ocean color observations and C) perform a statistical comparison of photoadaptive parameters in the Mid-Atlantic Bight and GoM to examine how broadly we can extrapolate these results along the NE U.S. Continental Shelf. Deliverables of this work will be: ship-based quantification of the various components of the carbon cycle in the GoM (standing stocks of POC, PIC, DOC plus primary production/calcification rates), an improved DOC algorithm, tuning of satellite carbon algorithms for the NE Continental Shelf, and documentation of the long- term biogeochemical and ecological changes occurring in the GoM carbon cycle. Quantification of the variability in the composition and concentration of dissolved and particulate carbon over a wide range of temporal and spatial scales is the first step towards understanding the role of coastal ecosystems in the global carbon cycle.
Ground-Based Doppler Orbitography and Radiopositioning Integrated by Satellite (DORIS) IDS Earth Orientation Parameters (EOP) Time Series Product from NASA CDDIS
Doppler Orbitography and Radiopositioning Integrated by Satellite (DORIS) Earth Orientation Parameters Time Series Product from the NASA Crustal Dynamics Data Information System (CDDIS). DORIS is a dual-frequency Doppler system consisting of a receiver flying aboard a satellite and a globally distributed network of ground beacons. The DORIS receiver on-board the orbiting satellite tracks the dual-frequency radio signals transmitted by the network of ground beacons and generates the DORIS data. A measurement is made of either the Doppler shift or absolute phase as the satellite’s orbit moves over the ground-based beacon. DORIS data records contain a time-tagged range-rate measurement with associated ancillary information. DORIS observations from a global network can be utilized for a variety of products. Analysis Centers (ACs) of the International DORIS Service (IDS) retrieve DORIS data on a regular basis to compute various DORIS products from data generated by the DORIS beacons supporting the IDS network, including the time series of Earth orientation parameters (EOPs). The IDS Analysis Center Coordinator combines these solutions to produce an official IDS EOP product. The EOP time series are available in text format.
Global Population Density Grid Time Series Estimates
The Global Population Density Grid Time Series Estimates provide a back-cast time series of population density grids based on the year 2000 population grid from SEDAC's Global Rural-Urban Mapping Project, Version 1 (GRUMPv1) data set. The grids were created by using rates of population change between decades from the coarser resolution History Database of the Global Environment (HYDE) database to back-cast the GRUMPv1 population density grids. Mismatches between the spatial extent of the HYDE calculated rates and GRUMPv1 population data were resolved via infilling rate cells based on a focal mean of values. Finally, the grids were adjusted so that the population totals for each country equaled the UN World Population Prospects (2008 Revision) estimates for that country for the respective year (1970, 1980, 1990, and 2000). These data do not represent census observations for the years prior to 2000, and therefore can at best be thought of as estimations of the populations in given locations. The population grids are consistent internally within the time series, but are not recommended for use in creating longer time series with any other population grids, including GRUMPv1, Gridded Population of the World, Version 4 (GPWv4), or non-SEDAC developed population grids. These population grids served as an input to SEDAC's Global Estimated Net Migration Grids by Decade: 1970-2000 data set.
HOMAGE Monthly Time series of global average steric height anomalies and ocean heat content estimates from gridded in-situ ocean observations version 01
The [HOMAGE_STERIC_OHC_TIME_SERIES_v01] dataset contains monthly global mean ocean heat content (OHC) anomalies as well as thermosteric, halosteric and total steric sea level anomalies computed from various gridded ocean data sets of sub-temperature and salinity profiles as provided by different institutions: Scripps Institution of Oceanography (SIO); Institute of Atmospheric Physics (IAP); Barnes objective analysis (BOA from CSIO, MNR); Jamstec / Ishii et al. 2017 (I17); and Met Office Hadley Centre: EN4_c13, EN4_c14, EN4_g10, and EN4_I09. The data are averaged over the quasi-global ocean domain (i.e., where valid values are defined; note that gaps exist, in particular towards polar latitudes), at monthly intervals. The input profiling data (i.e, temperature and salinity profiles at depth levels), editing, quality flags and processing schemes vary across the different gridded products, please refer to the documentation for each institution’s data product for details. Since 2005, the profiling data are dominated by the observations from the global Argo network (e.g., https://argo.ucsd.edu/), which comprises nearly 4000 active floats (as of 08/2022). Before 2005, non-Argo data such as XBT profilers were used, and the global ocean coverage was significantly more sparse. Data sets from SIO and BOA are Argo-only, while the others also include other observations, such as expendable bathythermographs (XBTs) and Conductivity-Temperature-Depth (CTD) observations. The data are active forward stream data files and will be frequently updated as new observations are acquired by Argo, and processed by the data centers.
Caribbean Time Series (CaTS), Puerto Rico, 1993 - 2007
The department of Marine Sciences at the University of Puerto Rico maintained the Caribbean Time Series (CaTS) between 1993 and 2007. Sampling took place approximately monthly at a station 26 nautical miles southwest of Puerto Rico.
CARIACO Ocean Time Series program, Cariaco Basin, Venezuela
Since November 1995, the CARIACO Ocean Time Series program has been studying the relationship between surface biogeochemical processes and the vertical fluxes of carbon and nutrients in a continental margin setting influenced by seasonal upwelling. This tectonic depression, located on the continental shelf of Venezuela, shows marked seasonal and interannual variation in hydrography and primary production induced in part by the regular migration of the Intertropical Convergence Zone (ITCZ). Between December and May, the Cariaco Basin experiences dry, upwelling-favorable weather. This leads to primary production of ~1.4 gC m-2 d-1 (upper 100 m). From June to November is the rainy season, winds are weaker and upwelling is reduced; primary production falls to half the rate observed during upwelling. The ultimate goal of CARIACO is to understand how meteorological and upper ocean hydrographic conditions affect primary production, dissolved inorganic carbon, CO2 fugacity, bacterial productivity and respiration, and vertical particle fluxes, and how variation in these parameters are reflected in the basin's sedimentary record, which is well known for storing high-frequency global climate signals.
Georeferenced Population Datasets of Mexico (GEO-MEX): Urban Place Time-Series Population of Mexico
The Urban Place Time-Series Population of Mexico contains population counts for more than 700 urban centers every 10 years from 1921 through 1990. The urban centers include metropolitan, conurbation, and city areas with more than 5,000 inhabitants as of 1980. This data set is produced by the Columbia University Center for International Earth Science Information Network (CIESIN).
CDDIS MEaSUREs SESES products Weekly Coseismic Offset Time Series
Making Earth System Data Records for Use in Research Environments (MEaSUREs) empowers the research community to participate in developing and generating data products that complement and augment NASA produced and distributed Earth science data products. NASA’s Enhanced Solid Earth Science Earth Science Data Record (ESDR) System (ESESES) continues and extends mature geodetic data product generation and archival as part of the MEaSUREs SESES project providing new, multi-decade, calibrated and validated geodetic-derived ESDRs obtained by the Scripps Institution of Oceanography (SIO) and NASA's Jet Propulsion Laboratory (JPL). These data-derived products include continuous multi-year high-rate GNSS, seismogeodetic, and meteorological time series, a catalog of transient deformation in tectonically active areas known for aseismic motion such as ETS with focus in Cascadia, and continuous estimation and cataloging of total near-surface water content derived from continuous GNSS time series over the continental U.S.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.