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1,416 results for “Evidence Base”
Supplementary material 1 from: Ya J-D, Wang W-T, Liu Y-L, Jiang H, Han Z-D, Zhang T, Huang H, Cai J, Li D-Z (2023) Five new and noteworthy species of Epidendroideae (Orchidaceae) from southwestern China based on morphological and phylogenetic evidence. PhytoKeys 235: 211-236. https://doi.org/10.3897/phytokeys.235.111230
Voucher and GenBank accession numbers of Neottia samples.
Figure 5 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 5 Alternaria hunanensis (HN43-10-2) A colony on PCA after 6 days at 25 °C in the dark B, C sporulation patterns D, E conidiophores and conidiogenous cells F conidia. Scale bars: 50 μm (B, C); 10 μm (D–F).
Figure 3 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 3 Alternaria cunninghamiicola (DSQ3-2) A colony on PCA after 6 days at 25 °C in the dark B sporulation patterns C, D conidiophores and conidiogenous cell E, F conidium. Scale bars: 50 μm (B); 10 μm (C–F).
Figure 7 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 7 Alternaria longqiaoensis (HN43-14) A colony on PCA after 6 days at 25 °C in the dark B, C sporulation patterns D, E conidiophore and conidiogenous cells F conidium. Scale bars: 50 μm (B, C); 10 μm (D–F).
Figure 9 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 9 Alternaria xinyangensis (ZLS1) A colony on PCA after 6 days at 25 °C in the dark B, C sporulation patterns D conidiophores and conidiogenouse cells E conidium. Scale bars: 50 μm (B, C);10 μm (D, E).
Figure 2 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 2 Splitgraphs showing the results of the pairwise homoplasy index (PHI) test of newly described taxa and closely-related species using both LogDet transformation and splits decomposition A the PHI of Alternaria xinyangensis sp. nov. and A. dongshanqiaoensis sp. nov. with their phylogenetically related isolates or species B the PHI of A. shandongensis sp. nov., A. kunyuensis sp. nov., A. hunanensis sp. nov. and A. longqiaoensis sp. nov. with their phylogenetically related isolates or species C the PHI of A. cunninghamiicola sp. nov. with their phylogenetically-related isolates or species. PHI test value (Φw) < 0.05 indicate significant recombination within a dataset. * indicates strains of this study. T indicates the ex-type strains, ET indicates the ex-epitype strains, HT indicates the ex-holotype strains.
Figure 1 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 1 Phylogenetic relationships of 116 isolates of the Alternaria species complex with related taxa with concatenated sequences of the SSU, LSU, ITS, GAPDH, RPB2, TEF1, Alt a1, endoPG and OPA10-2 loci using Bayesian inference (BI) and Maximum-likelihood (ML) methods. Bootstrap support values from ML ≥ 70% and BI posterior values ≥ 0.9 are shown at nodes (ML/BI). Alternaria alternantheraeCBS 124392 was the outgroup. * and red font indicates strains of this study. T indicates the ex-type strains, ET indicates the ex-epitype strains, HT indicates the ex-holotype strains.
Supplementary material 1 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Supplementary information
Figure 4 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 4 Alternaria dongshanqiaoensis (DSQ2-2) A colony on PCA after 6 days at 25 °C in the dark B, C sporulation patterns D conidiophore and conidiogenous cell E conidia. Scale bars: 50 μm (B, C); 10 μm (D, E).
Figure 8 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 8 Alternaria shandongensis (SDHG12) A colony on PCA after 6 days at 25 °C in the dark B–D sporulation patterns E, F conidiophores and conidiogenous cells G conidia. Scale bars: 50 μm (B, C); 10 μm (D–G).
Figure 6 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 6 Alternaria kunyuensis (XXG21) A colony on PCA after 6 days at 25 °C in the dark B, C sporulation patterns D conidiophores bear conidiogenous cells E secondary conidiophores, conidiogenous cells and conidia F conidium. Scale bars: 50 μm (B); 10 μm (C–F).
Figure 10 from: He J, Li D-W, Cui W-L, Huang L (2024) Seven new species of Alternaria (Pleosporales, Pleosporaceae) associated with Chinese fir, based on morphological and molecular evidence. MycoKeys 101: 1-44. https://doi.org/10.3897/mycokeys.101.115370
Figure 10 Symptoms on detached Chinese fir leaves A inoculated with isolates: A. xinyangensis (ZLS1), A. kunyuensis (XXG21), A. cunninghamiicola (DSQ3-2), A. dongshanqiaoensis (DSQ2-2), A. longqiaoensis (HN43-14), A. shandongensis (SDHG12) and A. hunanensis (HN43-10-2) B lesion length on detached Chinese fir leaves inoculated with A. xinyangensis (ZLS1), A. kunyuensis (XXG21), A. cunninghamiicola (DSQ3-2), A. dongshanqiaoensis (DSQ2-2), A. longqiaoensis (HN43-14), A. shandongensis (SDHG12) and A. hunanensis (HN43-10-2). Error bars represent standard error and different letters indicate significant difference, based on LSD's range test at P < 0.05 (n = 12). Scale bar: 10 mm (A).
Figure 2 from: Walter HE, Cádiz-Véliz A, Meriño BM, Villalobos-Barrantes HM, Guerrero PC (2024) Taxonomic dissection based on molecular evidence of the Eriosyce curvispina complex (Cactaceae): identifying nine endemic species from Central Chile. PhytoKeys 237: 117-139. https://doi.org/10.3897/phytokeys.237.107403
Figure 2 Phylogenetic position of putative members of the Eriosyce curvispina species complex. All sections of Eriosyce are collapsed, except for the Eriosyce section Horridocactus.
Figure 1 from: Walter HE, Cádiz-Véliz A, Meriño BM, Villalobos-Barrantes HM, Guerrero PC (2024) Taxonomic dissection based on molecular evidence of the Eriosyce curvispina complex (Cactaceae): identifying nine endemic species from Central Chile. PhytoKeys 237: 117-139. https://doi.org/10.3897/phytokeys.237.107403
Figure 1 Locations of samples used in the study ascribed to the Eriosyce curvispina complex included in phylogenetic inferences.
Figure 3 from: Walter HE, Cádiz-Véliz A, Meriño BM, Villalobos-Barrantes HM, Guerrero PC (2024) Taxonomic dissection based on molecular evidence of the Eriosyce curvispina complex (Cactaceae): identifying nine endemic species from Central Chile. PhytoKeys 237: 117-139. https://doi.org/10.3897/phytokeys.237.107403
Figure 3 Species of Eriosyce curvispina complex AE. aconcaguensisBE. andicolaCE. choapensisDE. curvispinaEE. grandifloraFE. horridaGE. mutabilisHE. orientalisIE. robusta. Photographs: Arón Cádiz-Véliz (A, B, F), Pablo Guerrero (C, D, G), Joaquín Keymer (E), Heidy Villalobos-Barrantes (H), Griselle Guerrero (I).
New electronic evidence authentication and protection scheme based on lattice
<p>The electronic evidence authentication and protection scheme is based on the lattice cryptosystem, and other illegal users or attackers are unable to obtain the original electronic evidence data in the whole process of the electronic evidence protection system, which well protects the security of the original electronic evidence and increases the overall security of the scheme.</p>
Supplementary material 2 from: Gaudeul M, Sweeney P, Munzinger J (2024) An updated infrageneric classification of the pantropical species-rich genus Garcinia L. (Clusiaceae) and some insights into the systematics of New Caledonian species, based on molecular and morphological evidence. PhytoKeys 239: 73-105. https://doi.org/10.3897/phytokeys.239.112563
Molecular phylogeny of Garcinia L. based on psbM-trnD and Bayesian inference
Figure 1 from: Gaudeul M, Sweeney P, Munzinger J (2024) An updated infrageneric classification of the pantropical species-rich genus Garcinia L. (Clusiaceae) and some insights into the systematics of New Caledonian species, based on molecular and morphological evidence. PhytoKeys 239: 73-105. https://doi.org/10.3897/phytokeys.239.112563
Figure 1 Some Garcinia New Caledonian species (except E from Fiji) and morphological features AG. balansae (Munzinger 4916), fruiting branch BG. balansae (Munzinger 4916), bark CG. sp. "JT814" (Munzinger 7282), habit DG. sp. "JT814" (Munzinger 7282), bark EG. vitiensis (Munzinger 7377), fruiting branch FG. neglecta (Munzinger 2690), fruit GG. comptonii (sin voucher), fruit.
Figure 3 from: Gaudeul M, Sweeney P, Munzinger J (2024) An updated infrageneric classification of the pantropical species-rich genus Garcinia L. (Clusiaceae) and some insights into the systematics of New Caledonian species, based on molecular and morphological evidence. PhytoKeys 239: 73-105. https://doi.org/10.3897/phytokeys.239.112563
Figure 3 Molecular phylogeny of Garcinia L. based on a combined chloroplast DNA dataset and Bayesian inference. Posterior probabilities (PP) and bootstrap support values (BS), obtained respectively by the Bayesian inference and Maximum Likelihood (ML) analysis, are indicated at each node of the cladogram. Nodes were collapsed when PP < 0.50. The lineages/sections discussed in the text are highlighted, and species names appear in colors depending on their native distribution areas: light green, Tropical Africa; dark green, Madagascar and Western Indian Ocean islands; grey, Southeast Asia; purple, Australia; orange, New Guinea; red, New Caledonia; dark blue, Southwest Pacific islands. Distribution information was taken from the Plants of the World Online website (POWO 2023; also see the table of vouchers). A few species occur in several regions, and the color of the main (largest) region was used. All accessions were newly sequenced in this study.
Supplementary material 1 from: Gaudeul M, Sweeney P, Munzinger J (2024) An updated infrageneric classification of the pantropical species-rich genus Garcinia L. (Clusiaceae) and some insights into the systematics of New Caledonian species, based on molecular and morphological evidence. PhytoKeys 239: 73-105. https://doi.org/10.3897/phytokeys.239.112563
List of taxa and accessions used in this study
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.