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1,076 results for “Metabarcoding”
zenodo28/100
Supplementary material 9 from: Bíró T, Duleba M, Földi A, Kiss KT, Orgoványi P, Trábert Z, Vadkerti E, Wetzel CE, Ács É (2022) Metabarcoding as an effective complement of microscopic studies in revealing the composition of the diatom community – a case study of an oxbow lake of Tisza River (Hungary) with the description of a new Mayamaea species. Metabarcoding and Metagenomics 6: e87497. https://doi.org/10.3897/mbmg.6.87497
Alignment S3
opencc-zeroOct 2022View details →
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Supplementary material 5 from: Bíró T, Duleba M, Földi A, Kiss KT, Orgoványi P, Trábert Z, Vadkerti E, Wetzel CE, Ács É (2022) Metabarcoding as an effective complement of microscopic studies in revealing the composition of the diatom community – a case study of an oxbow lake of Tisza River (Hungary) with the description of a new Mayamaea species. Metabarcoding and Metagenomics 6: e87497. https://doi.org/10.3897/mbmg.6.87497
Table S5
opencc-zeroOct 2022View details →
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Supplementary material 4 from: Bíró T, Duleba M, Földi A, Kiss KT, Orgoványi P, Trábert Z, Vadkerti E, Wetzel CE, Ács É (2022) Metabarcoding as an effective complement of microscopic studies in revealing the composition of the diatom community – a case study of an oxbow lake of Tisza River (Hungary) with the description of a new Mayamaea species. Metabarcoding and Metagenomics 6: e87497. https://doi.org/10.3897/mbmg.6.87497
Table S4
opencc-zeroOct 2022View details →
zenodo28/100
Supplementary material 6 from: Herrera-Mesías F, Ep Jarboui IK, Weigand AM (2022) A metabarcoding framework for wild bee assessment in Luxembourg. Journal of Hymenoptera Research 94: 215-246. https://doi.org/10.3897/jhr.94.84617
Mock community metabarcoding results
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 2 from: Herrera-Mesías F, Ep Jarboui IK, Weigand AM (2022) A metabarcoding framework for wild bee assessment in Luxembourg. Journal of Hymenoptera Research 94: 215-246. https://doi.org/10.3897/jhr.94.84617
Mean wild bee genus penalty scores sorted by primer pair
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 4 from: Herrera-Mesías F, Ep Jarboui IK, Weigand AM (2022) A metabarcoding framework for wild bee assessment in Luxembourg. Journal of Hymenoptera Research 94: 215-246. https://doi.org/10.3897/jhr.94.84617
Tagged primer combinations used in the mock community experiment
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 5 from: Herrera-Mesías F, Bause C, Ogan S, Burger H, Ayasse M, Weigand AM, Eltz T (2022) Double-blind validation of alternative wild bee identification techniques: DNA metabarcoding and in vivo determination in the field. Journal of Hymenoptera Research 93: 189-214. https://doi.org/10.3897/jhr.93.86723
Supplementary file 5
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 4 from: Herrera-Mesías F, Bause C, Ogan S, Burger H, Ayasse M, Weigand AM, Eltz T (2022) Double-blind validation of alternative wild bee identification techniques: DNA metabarcoding and in vivo determination in the field. Journal of Hymenoptera Research 93: 189-214. https://doi.org/10.3897/jhr.93.86723
Supplementary file 4
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 3 from: Herrera-Mesías F, Bause C, Ogan S, Burger H, Ayasse M, Weigand AM, Eltz T (2022) Double-blind validation of alternative wild bee identification techniques: DNA metabarcoding and in vivo determination in the field. Journal of Hymenoptera Research 93: 189-214. https://doi.org/10.3897/jhr.93.86723
Supplementary file 3
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 9 from: Herrera-Mesías F, Ep Jarboui IK, Weigand AM (2022) A metabarcoding framework for wild bee assessment in Luxembourg. Journal of Hymenoptera Research 94: 215-246. https://doi.org/10.3897/jhr.94.84617
Primer pair amplification success rates based on Linnaean species
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 2 from: Herrera-Mesías F, Bause C, Ogan S, Burger H, Ayasse M, Weigand AM, Eltz T (2022) Double-blind validation of alternative wild bee identification techniques: DNA metabarcoding and in vivo determination in the field. Journal of Hymenoptera Research 93: 189-214. https://doi.org/10.3897/jhr.93.86723
Supplementary file 2
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 5 from: Herrera-Mesías F, Ep Jarboui IK, Weigand AM (2022) A metabarcoding framework for wild bee assessment in Luxembourg. Journal of Hymenoptera Research 94: 215-246. https://doi.org/10.3897/jhr.94.84617
Overiew of MOTU data per mock community
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 1 from: Herrera-Mesías F, Bause C, Ogan S, Burger H, Ayasse M, Weigand AM, Eltz T (2022) Double-blind validation of alternative wild bee identification techniques: DNA metabarcoding and in vivo determination in the field. Journal of Hymenoptera Research 93: 189-214. https://doi.org/10.3897/jhr.93.86723
Supplementary file 1
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 8 from: Herrera-Mesías F, Ep Jarboui IK, Weigand AM (2022) A metabarcoding framework for wild bee assessment in Luxembourg. Journal of Hymenoptera Research 94: 215-246. https://doi.org/10.3897/jhr.94.84617
In silico primer performance evaluation using PrimerMiner with MOTU data sorted by wild bee genus
opencc-zeroJan 2023View details →
zenodo28/100
Supplementary material 1 from: Martoni F, Smith RL, Piper AM, Nancarrow N, Aftab M, Trebicki P, Kimber RBE, Rodoni BC, Blacket MJ (2023) Non-destructive insect metabarcoding as a surveillance tool for the Australian grains industry: a first trial for the iMapPESTS smart trap. Metabarcoding and Metagenomics 7: e95650. https://doi.org/10.3897/mbmg.7.95650
All the taxa (ASVs) recorded in this study
opencc-zeroFeb 2023View details →
zenodo28/100
Supplementary material 2 from: Martoni F, Smith RL, Piper AM, Nancarrow N, Aftab M, Trebicki P, Kimber RBE, Rodoni BC, Blacket MJ (2023) Non-destructive insect metabarcoding as a surveillance tool for the Australian grains industry: a first trial for the iMapPESTS smart trap. Metabarcoding and Metagenomics 7: e95650. https://doi.org/10.3897/mbmg.7.95650
Species accumulation curve
opencc-zeroFeb 2023View details →
zenodo28/100
Supplementary material 1 from: Dou H, Wang M, Yin X, Feng L, Yang H (2023) Can the Eurasian otter (Lutra lutra) be used as an effective sampler of fish diversity? Using molecular assessment of otter diet to survey fish communities. Metabarcoding and Metagenomics 7: e96733. https://doi.org/10.3897/mbmg.7.96733
Bioinformatic processing
opencc-zeroFeb 2023View details →
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Supplementary material 2 from: Dou H, Wang M, Yin X, Feng L, Yang H (2023) Can the Eurasian otter (Lutra lutra) be used as an effective sampler of fish diversity? Using molecular assessment of otter diet to survey fish communities. Metabarcoding and Metagenomics 7: e96733. https://doi.org/10.3897/mbmg.7.96733
appendices S1–S4.2
opencc-zeroFeb 2023View details →
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Supplementary material 3 from: Okanishi M, Kohtsuka H, Wu Q, Shinji J, Shibata N, Tamada T, Nakano T, Minamoto T (2023) Development of two new sets of PCR primers for eDNA metabarcoding of brittle stars (Echinodermata, Ophiuroidea). Metabarcoding and Metagenomics 7: e94298. https://doi.org/10.3897/mbmg.7.94298
A specimen list of brittle star species collected from Sagami Bay in the last 10 years
opencc-zeroMar 2023View details →
zenodo28/100
Supplementary material 4 from: Okanishi M, Kohtsuka H, Wu Q, Shinji J, Shibata N, Tamada T, Nakano T, Minamoto T (2023) Development of two new sets of PCR primers for eDNA metabarcoding of brittle stars (Echinodermata, Ophiuroidea). Metabarcoding and Metagenomics 7: e94298. https://doi.org/10.3897/mbmg.7.94298
Supplementary images S1–S16
opencc-zeroMar 2023View details →
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record