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111
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ShareScore release 0.9.0
Dataset results
111 results for “Bystander”
Gene regulatory basis of bystander activation in CD8+ T cells (RNA-seq)
GEO Series GSE180730. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Productively HIV-1 infected and bystander primary human CD4+ T-cells
GEO Series GSE247196. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Differential expression of microRNAs in productively HIV-1 infected and bystander macrophages in culture.
GEO Series GSE103394. Homo sapiens. 9 samples. Type: Non-coding RNA profiling by high throughput sequencing.
A divergent and complementary transcriptional response in poxvirus-infected and bystander inflammatory monocytes is partly dictated by interferon.
GEO Series GSE215747. Mus musculus. 39 samples. Type: Expression profiling by high throughput sequencing.
Regulatory T cell-derived TGF-β signaling governs the heterogeneity and abundance of tumor-infiltrating bystander CD8+ T cells
GEO Series GSE306797. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
mRNA expression profiles in productively HIV-1 infected and bystander primary human CD4+ T-cells
GEO Series GSE247191. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Oncolytic virus therapy mobilizes tumor-resident CD4+ bystander T cells to restore systemic anti-microbial immunity [ATAC-seq]
GEO Series GSE302620. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Expression Data from Memory P14 Tg CD8 T cells after either saline mock-infection, Pichinde Virus Infection (bystander infection) or Pichinde Virus infection with daily treatment with anti-CD122 (clon
GEO Series GSE69791. Mus musculus. 9 samples. Type: Expression profiling by array.
miRNA expression profiles in productively HIV-1 infected and bystander primary human CD4+ T-cells
GEO Series GSE247194. Homo sapiens. 9 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Inflammasome-induced extracellular vesicles harbor distinct RNA signatures and alter bystander macrophage responses
GEO Series GSE180709. Homo sapiens. 193 samples. Type: Expression profiling by high throughput sequencing; Expression profiling by array.
Human CD4+ memory T cells are preferential targets for bystander activation and apoptosis
GEO Series GSE13738. Homo sapiens. 12 samples. Type: Expression profiling by array.
Retinoic acid receptor-related orphan receptor α regulates bystander activation of memory CD8+ T cells
GEO Series GSE304290. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Use of Public Access Defibrillators by Untrained Bystanders
ClinicalTrials.gov study NCT03230773. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Improving Bystander CPR Quality Through Dispatcher-assisted Basic Life Support Education Program
ClinicalTrials.gov study NCT02527473. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Global gene expression profiling in mouse plasma cell tumor precursor and bystander cells revels potential intervention targets for plasma-cell neoplasia
GEO Series GSE34078. Mus musculus. 82 samples. Type: Expression profiling by array.
A divergent and complementary transcriptional response in poxvirus-infected and bystander inflammatory monocytes is partly dictated by interferon [iMO IFN ECTV]
GEO Series GSE215745. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.
A divergent and complementary transcriptional response in poxvirus-infected and bystander inflammatory monocytes is partly dictated by interferon [iMO_Bcells_ECTV]
GEO Series GSE215746. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing.
Bystander response to 2.5 Gy of protons in a human 3-dimensional skin model in 16 h after exposure
Bystander mechanisms that originate in the areas surrounding a tissue damage presumably play an important role participating in wound healing and tissue remodeling. Thus identification and characterization of bystander mechanisms will help to development of new treatments of patients with a radiation exposure. In the present study we irradiated 3-dimensional tissue model of human epidermis Epi-200 (Mat-Tek Ashland MA) with 2.5 Gy protons. By exposing only a thin strip across the center of the EPI-200 tissue we have been able to measure global gene expression responses in directly irradiated and bystander cells located at 0.125-0.375 0.375-0.625 0.625-875 mm from the irradiation line. The data were analyzed using BRB-Array Tools (NIH) and further gene ontology analysis and network analysis was performed with Panther (Applied Biosystems) and IPA (Ingenuity) accordingly. Significantly responding genes were identified at all distances and included sets common to both direct and bystander responses. False discovery rate in bystander samples did not exceed 20% (p=0.001) and was sufficiently low in the samples obtained after the whole tissue exposure (0.06-1.16%). Analysis of the fragments cut at the same distance revealed 52 54 and 88 differentially expressed genes. These gene lists overlapped each other had from 3 to 12 genes in common including CLED2 S100A7A. Samples obtained after the whole tissue exposure discovered 949 differentially expressed genes. Moreover the performed gene ontology analysis showed there overrepresentation of TP53 pathway (pathways p=2.04E-02) a common marker of direct irradiation response and also overrepresentation of the following groups of genes: signal transduction (p=4.52E-04) cell communication (p=1.24E-04) and cell cycle in the category of biological processes; DNA helicase activity (p=2.54E-07) receptor binding (p=6.19E-04) calcium ion binding proteins (p=2.57E-03) as the molecular functions. Differentially expresses genes of bystander samples had few categories in common such as cell communication (p=2.36E-03) and signal transduction (p=2.42E-03) among the biological processes and receptor activity (p=4.54E-03) among the molecular functions. Categories specific for the bystander samples included G-protein coupled receptors (p=7.24E-03) and ligand-gated ion channels (p=4.16E-03) suggesting a role of external stimulation and ion trafficking in bystander mechanisms. Radiation induced gene expression in 3-dimensional tissue model Epi-200 was measured in 16 hours after exposure to 2.5 Gy of protons. Four independent experiments were performed for the samples collected at different distances from the irradiation line (125-375 375-625 and 625-875 micrometers) using three tissue fragments per a data point. Moreover three sets of whole tissue irradited samples were also generated for 0 and 2.5 Gy (6 samples total) and used for comparison of bystander and direct responses.
Bystander responses to 0.5Gy of alpha-particles in a human 3-dimensional skin model in 4h after exposure to ionizing radiation
GEO Series GSE23903. Homo sapiens. 6 samples. Type: Expression profiling by array.
Genome-wide microarray analysis of immortalized human fibroblasts in response to alpha-particle radiation and the radiation induced bystander effect
GEO Series GSE32091. Homo sapiens. 42 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.