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1,634 results for “Data integration”
Figure 5e. from: A first integrative study of the identity and origins of the British Dwarf Pill Millipede populations, Trachysphaera cf. lobata (Diplopoda, Glomerida, Glomeridae) - Biodiversity Data Journal 3: e5176 (09 June 2015) https://doi.org/10.3897/BDJ.3.e5176
Figure 5e. - Trachysphaera SEM characters. A+B: MBsID 852812, C-E: MBsID 852823. Abbreviations: AS = anal shield; Co = collum; Gr = groove, 'Ohrgrube'; h = head; T# = refers to number of tergite; th-sh = thoracic shield; c2 = collum, number of toothed ridges; c3 = thoracic shield anterior margin, number of rows of sclerotized nodules; c4 = thoracic shield, number of rows of large sclerotized protuberances; c5 = endotergum structure; c6 = endotergum, number of rows of setae; c7 = endotergum, number of rows of sclerotized nodules; c9 = female tergite 10, posterior margin, number of rows of large bacilli (with row counts 1, 2); c11 = female anal shield, shape; c13 = female anal shield, setae at posterior margin; c15 = female anal shield, large circular grooves (for more information on characters see Table 2).Figure 5a.TW1: T.lobata, female, Isle of Wight; anterior view; scale bar: 400 µmFigure 5b.TW1: T.lobata, female, Isle of Wight; anterior body part, lateral view; scale bar: 300 µmFigure 5c.TW29: T.lobata, female, South Wales; tergite 10 and anal shield, lateral view; scale bar: 300 µm; c13 points to Fig. 4eFigure 5d.TW29: T.lobata, female, South Wales; endotergum (underside of tergite); scale bar: 20 µmFigure 5e.TW29: T.lobata, female, South Wales; posterior margin of anal shield, detail; scale bar: 50 µm <br> anterior view (MBiID 852942)
Figure 6b. from: A first integrative study of the identity and origins of the British Dwarf Pill Millipede populations, Trachysphaera cf. lobata (Diplopoda, Glomerida, Glomeridae) - Biodiversity Data Journal 3: e5176 (09 June 2015) https://doi.org/10.3897/BDJ.3.e5176
Figure 6b. - Telopods. SEM micrographs of Trachysphaeralobata males from Isle of Wight. For TW# refer to Checklists. Abbreviations: fem = femur; pre = prefemur; syn = syncoxite; ta = tarsus; ti = tibia.Figure 6a.anterior view (MBiID 852943)Figure 6b.anterior view (MBiID 852942)Figure 6c.posterior (anal) view (MBiID 852974)Figure 6d.anterior view (MBiID 852977) <br> anterior view (MBiID 852977)
Supplementary material 12: Collector dashboard: specimens collected by Y. M. Marusik from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens collected by Y. M. Marusik. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 9: Integrated legacy literature and prospective publishing dashboard: species-rank treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 42 articles published either as open access articles published in Zootaxa or in Biodiversity Data Journal, containing treatments on spiders. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 8: Integrated legacy literature and prospective publishing dashboard: all treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 42 articles published either as open access articles published in Zootaxa or in Biodiversity Data Journal, containing treatments on spiders. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 5: Legacy literature dashboard: species-rank treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 37 open access articles published in Zootaxa containing treatments on spiders. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 16: Author dashboard: Jeremy A. Miller from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing content from articles by Jeremy A. Miller (lead author). When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Supplementary material 4: Legacy literature dashboard: all treatments from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts summarizing content from 37 open access articles published in Zootaxa containing treatments on spiders. This page shows data from all treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 dashboard charts.
Supplementary material 1: Global Biodiversity Information Facility: Taxa and Records from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
All records in GBIF with taxonomic ranks (kingdom, phylum, class, order, and species), basis of record (e.g., preserved specimen), and count of records, exported from GBIF on 7 December 2014.
Figure 12. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 12. - Excerpt from a taxonomic treatment with ambiguously structured materialsCitations data in the source document. The top frame shows the published PDF, the lower frame shows the same content in GoldenGATE with the treatment and materialsCitation tags revealed. The source document is ambiguous about how many paratype specimens are deposited in which natural history collection. This is represented in XML by associating the collection event data (place, time, collector) with each of the listed institutional collections but no quantity of specimens is assigned to any collection. The 110 male and 44 female specimens are also associated with the collection event data, but with no institutional collection.
Supplementary material 11: Collecting country dashboard: specimens collected in Russia from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens collected in Russia. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Figure 11. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 11. - Dashboard charts summarizing data published in open access articles in Zootaxa and Biodiversity Data Journal containing treatments on spiders, filtered to show only one lead author: Jeremy A. Miller (Suppl. material 16). Miller was lead author on two publications in Biodiversity Data Journal and one in Zootaxa, and was the only lead author on open access publications featuring spider treatments in both journals. Note that in addition to the three articles on which he is lead author, he is also a contributing author to a fourth article (Wang et al. 2010), but content from this article is not included here (see Discussion: Tracking individuals).
Figure 10. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 10. - Dashboard charts summarizing data published in open access articles in Zootaxa and Biodiversity Data Journal containing treatments on spiders, filtered to show only one species: Tenuiphantestenuis (Suppl. material 15). Data on Tenuiphantestenuis was included in three treatments, all published in Biodiversity Data Journal.
Figure 9b. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 9b. - Dashboard charts summarizing content from one article (Kronestedt and Marusik 2011) (Suppl. materials 13, 14).Figure 9a.Data from all treatments in Kronestedt and Marusik (2011).Figure 9b.Data from one treatment, Pardosazyuzini in Kronestedt and Marusik (2011). <br> Data from one treatment, Pardosazyuzini in Kronestedt and Marusik (2011).
Figure 9a. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 9a. - Dashboard charts summarizing content from one article (Kronestedt and Marusik 2011) (Suppl. materials 13, 14).Figure 9a.Data from all treatments in Kronestedt and Marusik (2011).Figure 9b.Data from one treatment, Pardosazyuzini in Kronestedt and Marusik (2011). <br> Data from all treatments in Kronestedt and Marusik (2011).
Supplementary material 10: Institutional collection dashboard: specimens from the collection of the California Academy of Sciences (CAS) from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Dashboard charts showing only specimens from the collection of the California Academy of Sciences. This page shows data from species-rank treatments. When viewed using a browser (such as Google Chrome) with an internet connection, this page sends a series of queries to Plazi and integrates the results with the Google Charts API to produce 37 interactive dashboard charts.
Figure 7. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 7. - Dashboard charts summarizing content from species-rank treatments published in open access articles in Zootaxa and Biodiversity Data Journal containing treatments on spiders, filtered to show only specimens collected in Russia (Suppl. material 11). Russia was the country associated with the largest number of specimens in this body of literature. All content shown here is from treatments published in Zootaxa; no specimens collected in Russia were cited in Biodiversity Data Journal treatments on spiders.
Figure 5b. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 5b. - Dashboard charts summarizing content from 37 open access articles published in Zootaxa and five articles published in Biodiversity Data Journal containing treatments on spiders (Suppl. materials 8, 9). These charts illustrate interoperability of data from XML-based publishing and subsequently marked up legacy literature.Figure 5a.All treatments regardless of taxonomic rank.Figure 5b.Species-rank treatments. <br> Species-rank treatments.
Figure 6. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 6. - Dashboard charts summarizing content from species-rank treatments published in open access articles in Zootaxa and Biodiversity Data Journal containing treatments on spiders, filtered to show only specimens from the collection of the California Academy of Sciences (Suppl. material 10). CAS was the institution associated with the largest number of specimens in this body of literature. All content shown here is from treatments published in Zootaxa; no CAS specimens were cited in Biodiversity Data Journal treatments on spiders.
Figure 8. from: Integrating and visualizing primary data from prospective and legacy taxonomic literature - Biodiversity Data Journal 3: e5063 (12 May 2015) https://doi.org/10.3897/BDJ.3.e5063
Figure 8. - Dashboard charts summarizing content from species-rank treatments published in open access articles in Zootaxa and Biodiversity Data Journal containing treatments on spiders, filtered to show only specimens collected by Y. M. Marusik (Suppl. material 12). Marusik was the collector associated with the largest number of specimens in this body of literature. Note that this count excludes specimens that Marusik collected collaboratively with others (see Discussion: Tracking Individuals). All content shown here is from articles published in Zootaxa; no specimens collected by Marusik were cited in Biodiversity Data Journal treatments on spiders.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.