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Host-parasite interactions between a copepod (Pharodes tortugensis) and small reef-associated gobies (Coryphopterus) in the British Virgin Islands
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Virgin Islands National Park: Coral Reef: Population Dynamics: Scleractinian corals
These data are evidence of the the long-term dynamics of shallow coral reefs along the south coast of St. John from as early as 1989. These data come from the long term site at 9 m depth known as Yawzi Point. These data are representative of the Video Transects (VT) starting in 1989 (see Edmunds and Wirman 1991, MEPS 78: 201-204). All images analyzed using 200 randoms dots placed at random on their surface and the substratum beneath each dot annotated (~371,800 decisions by Nov 2017). Hurricanes Irma and Maria struck in September 2017. Because of this, sampling was completed in July and November of 2017. Data are available upon request for 1989 (raw data lost), 1992, 1993, and 1994. These images were analyzed with a coarser resolution that is not consistent with the current format.
Heron Island reef metabolism
<p>Data file of Heron Island reef metabolism collected between 2015-2016.</p>
FIGURE 1. Helmutneris vadum n in Helmutneris vadum, a new species of Lumbrineridae (Annelida) from Lizard Island, Great Barrier Reef, Australia
FIGURE 1. Helmutneris vadum n. sp. A. Holotype AM W.43952, general view; B. the same, anterior part, ventral view; C. the same, dorsal view; D. Paratype W.46032, maxillary apparatus, dorsal view; E. W.40849, maxilla II, dorsal view; F, the same, maxillae III and IV, dorsal view; G. W.46042, mandibles. Abbreviations: MI—maxilla I, MII—maxilla II, MIII—maxilla III, MIV—maxilla IV, al—attachment lamella, C—maxillary carriers.
FIGURE 2. Helmutneris vadum n in Helmutneris vadum, a new species of Lumbrineridae (Annelida) from Lizard Island, Great Barrier Reef, Australia
FIGURE 2. Helmutneris vadum n. sp. Paratype W.46035. A. Anterior part, ventral view; B. Parapodium 1; C. Parapodia 14– 15; D. Parapodia 31–32; E. Simple multidentate hooded hook, parapodium 12; F. Simple multidentate hooded hook, parapodium 17. G. The same, enlarged. Abbreviations: psl—postchaetal lobe.
Data from: Detailed food web networks of three Greater Antillean coral reef systems: the Cayman Islands, Cuba, and Jamaica
Food webs represent one of the most complex aspects of community biotic interactions. Complex food webs are represented as networks of interspecific interactions, where nodes represent species or groups of species, and links are predator-prey interactions. This paper presents reconstructions of coral reef food webs in three Greater Antillean regions of the Caribbean: the Cayman Islands, Cuba, and Jamaica. Though not taxonomically comprehensive, each food web nevertheless comprises producers and consumers, single-celled and multicellular organisms, and species foraging on reefs and adjacent seagrass beds. Species are grouped into trophic guilds if their prey and predator links are indistinguishable. The data list guilds, taxonomic composition, prey guilds/species, and predators. Primary producer and invertebrate richness are regionally uniform, but vertebrate richness varies on the basis of more detailed occurrence data. Each region comprises 169 primary producers, 513 protistan and invertebrate consumer species, and 159, 178, and 170 vertebrate species in the Cayman Islands, Cuba, and Jamaica, respectively. Caribbean coral reefs are among the world's most endangered by anthropogenic activities. The datasets presented here will facilitate comparisons of historical and regional variation, the assessment of impacts of species loss and invasion, and the application of food webs to ecosystem analyses.
Data from: Spatial patterns of self-recruitment of a coral reef fish in relation to island-scale retention mechanisms
Oceanographic features influence the transport and delivery of marine larvae, and physical retention mechanisms, such as eddies, can enhance self-recruitment (i.e. the return of larvae to their natal population). Knowledge of exact locations of hatching (origin) and settlement (arrival) of larvae of reef animals provides a means to compare observed patterns of self-recruitment 'connectivity' with those expected from water circulation patterns. Using parentage inference based on multiple sampling years in Moorea, French Polynesia, we describe spatial and temporal variation in self-recruitment of the anemonefish Amphiprion chrysopterus, evaluate the consistency of net dispersal distances of self-recruits against the null expectation of passive particle dispersal and test the hypothesis that larvae originating in certain reef habitats (lagoons and passes) would be retained and thus more likely to self-recruit than those originating on the outer (fore) reef. Estimates of known self-recruitment were consistent across the sampling years (~25–27% of sampled recruits). For most (88%) of these self-recruits, the net distance between hatching and settlement locations was within the maximum dispersal distance expected for a neutrally buoyant passive particle based on the longest duration of the larval dispersive phase and the average direction and speed of current flow around Moorea. Furthermore, a parent of a given body size on the outer (fore) reef of Moorea was less likely to produce self-recruits than those in passes. Our findings show that even a simple dispersal model based on net average flow and direction of alongshore currents can provide insight into landscape-scale retention patterns of reef fishes.
FIGURE 31 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 31. Cumella sancristobalensis sp. nov. Holotype male. A, body, lateral view; B, carapace, dorsal view; C, antenna 1; D, maxilliped 3; E, pereopod 1; F, pereopod 2; G, pereopod 3; H, pereopod 4; I, pereopod 5; J, uropod. Scale bars: A, B, 0.5 mm; C–J, 0.1 mm.
FIGURE 27 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 27. Cumella banarescui sp. nov. Holotype male. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B–I, 0.1 mm.
FIGURE 28 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 28. Cumella curvicauda sp. nov. Holotype subadult male. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B–I, 0.1 mm.
FIGURE 30 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 30. Cumella baraschi sp. nov. Holotype subadult male. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B–I, 0.1 mm.
FIGURE 19 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 19. Cumella reticulata sp. nov. Holotype subadult female. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: Scale bars: A, 0.5 mm; B–I, 0.1 mm.
FIGURE 22 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 22. Cumella enriquensis sp. nov. Holotype subadult female. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B–I, 0.1 mm.
FIGURE 26 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 26. Cumella nastasescui sp. nov. Holotype subadult male. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B–I, 0.1 mm.
FIGURE 11 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 11. Cumella amiti sp. nov. Paratype subadult male. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B–I, 0.1 mm.
FIGURE 12 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 12. Cumella tuberculata sp. nov. Holotype female. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B–H, 0.1 mm; I, 0.2 mm.
FIGURE 9 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 9. Cumella hexadentata sp. nov. Holotype subadult female. A, body, lateral view; B, carapace, dorsal view; C, antenna 1; D, maxilliped 3; E, pereopod 1; F, pereopod 2; G, pereopod 3; H, pereopod 4; I, pereopod 5; J, uropod. Scale bars: A, B, 0.5 mm; C–J, 0.1 mm.
FIGURE 18 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 18. Cumella maxipropa sp. nov. Holotype subadult female. A, body, lateral view; B, antenna 1; C, antenna 1, flagelli, magnified; D, maxilliped 3; E, pereopod 1; F, pereopod 2; G, pereopod 3; H, pereopod 4; I, pereopod 5; J, uropod. Scale bars: A, 0.5 mm; C, D, 0.05 mm; B, E–J, 0.1 mm.
FIGURE 21 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 21. Cumella longirostrum sp. nov. Holotype subadult female. A, body, lateral view; B, antenna 1; C, maxilliped 3; D, pereopod 1; E, pereopod 2; F, pereopod 3; G, pereopod 4; H, pereopod 5; I, uropod. Scale bars: A, 0.5 mm; B, 0.05 mm; C–I, 0.1 mm.
FIGURE 25 in New species and new records of Cumacea (Crustacea: Peracarida: Cumacea) from mesophotic reefs of Puerto Rico and U. S. Virgin Islands, Caribbean Sea
FIGURE 25. Cumella ruxandrae sp. nov. Holotype subadult male. A, maxilliped 3; B, pereopod 1; C, pereopod 2; D, pereopod 3; E, pereopod 4; F, pereopod 5; G, uropod. Scale bars: A, 0.1 mm; B–G, 0.1 mm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
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