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92 results for “Spatial differentiation”

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geo20/100

Dissection of the 4D chromatin structure of the alpha-globin locus through in vivo erythroid differentiation with extreme spatial and temporal resolution [ATAC-seq]

GEO Series GSE137114. Mus musculus. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenApr 2020View details →
geo20/100

Spatial differentiation of gene expression in Aspergillus niger colonies grown for sugar beet pulp utilization

GEO Series GSE66641. Aspergillus niger; Aspergillus niger CBS 513.88. 10 samples. Type: Expression profiling by array.

openGEO-OpenMar 2016View details →
geo20/100

Dissection of the 4D chromatin structure of the alpha-globin locus through in vivo erythroid differentiation with extreme spatial and temporal resolution [Tiled-C]

GEO Series GSE137199. Mus musculus. 63 samples. Type: Other.

openGEO-OpenApr 2020View details →
geo16/100

Differential expression analysis in single cell and spatial RNASeq without model assumptions

GEO Series GSE299816. Mus musculus. 1 samples. Type: Other.

openGEO-OpenOct 2025View details →
geo16/100

Spatial characterization of sex differential regulations in kidney across lifespan

GEO Series GSE252772. Mus musculus. 88 samples. Type: Other.

openGEO-OpenJan 2025View details →
geo16/100

Spatial transcriptomics of bladder cancer with squamous differentiation

GEO Series GSE299573. Homo sapiens. 1 samples. Type: Other.

openGEO-OpenNov 2025View details →
geo16/100

Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics]

GEO Series GSE313918. Homo sapiens. 246 samples. Type: Other.

openGEO-OpenDec 2025View details →
geo16/100

A long-term high fat diet induces differential gene expression changes in spatially distinct adipose tissues.

GEO Series GSE269663. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2024View details →
geo16/100

Spatial Transcriptomics of Colorectal Carcinoma Sample with Different Level of Differentiation

GEO Series GSE284061. Homo sapiens. 1 samples. Type: Other.

openGEO-OpenDec 2024View details →
geo16/100

A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation

GEO Series GSE303070. Homo sapiens. 352 samples. Type: Other.

openGEO-OpenDec 2025View details →
geo16/100

Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris

GEO Series GSE301280. Homo sapiens. 24 samples. Type: Other.

openGEO-OpenDec 2025View details →
geo12/100

Differential microvascular endothelial cell responses in the retina in diabetes compared to the heart and kidneys, a spatial transcriptomic analysis.

GEO Series GSE263128. Mus musculus. 24 samples. Type: Other.

openGEO-OpenSep 2024View details →

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record