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8,068 results for “Transcriptome analysis”
Data from: Transcriptome analysis reveals the mechanism underlying rapid changes in the early phase brain of bi-directional sex change in Trimma okinawae
<p>Teleost fish exhibit remarkable sexual plasticity and display divergent developmental systems including hermaphroditism. One of the more fascinating model systems of sexual plasticity is socially controlled sex change, which is often observed in coral reef fish. The Okinawa rubble goby, <em>Trimma okinawae</em>, is a bi-directional sex change fish that can rapidly change its sex in both directions depending on social circumstances. Although behavioral and neuro-endocrinal sex change occurs within an hour and is believed to trigger gonadal changes, the underlying mechanisms remain poorly understood. In this study, we conducted a de novo transcriptome analysis of the <em>T. okinawae</em> brain and identified genes that were differentially expressed between the sexes and genes that were immediately controlled by social stimulation causing a sex change. We found that a larger number of genes are regulated during the male-to-female transition compared with a change from female to male. Several genes showed concordant expression shifts regardless of the sex change direction. Furthermore, some were associated with histone modification in nerve cells and regulated in the same direction. Overall, we identified genes that regulate the rapid behavioral and neuroendocrinal control of sex change and provide insight into the mechanism of sexual plasticity in teleost fish.</p>
Comprehensive Re-annotation and Transcriptome Analysis Provide Insights into Pepper Development and Ascorbic Acid Biosynthesis
<p>This archive contains high-quality gene annotation file termed v2a of the pepper reference genome CA59 and gene expression file in pepper development in the pepper "Comprehensive Re-annotation and Transcriptome Analysis Provide Insights into Pepper Development and Ascorbic Acid Biosynthesis"</p>
Data-driven transcriptomics analysis identifies PCSK9 as a novel key regulator in liver aging. (Histology Images)
<p>These are the histology images on "Data-driven transcriptomics analysis identifies PCSK9 as a novel key regulator in liver aging."</p>
Dataset for the transcriptome analysis of hippocampal subfields identifies gene expression profiles associated with long-term active place avoidance memory
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Data from: Transcriptomic analysis of skin pigmentation variation in the Virginia opossum (Didelphis virginiana).
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Data from: Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
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Transcriptome analysis of Drosophila suzukii reveals molecular mechanisms conferring pyrethroid and spinosad resistance
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Data from: Transcriptome analysis of predator- and prey-induced phenotypic plasticity in the Hokkaido salamander (Hynobius retardatus)
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Spatial transcriptomic analysis of human dorsoal root ganglia neurons
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Transcriptome-wide alternative mRNA splicing analysis reveals post-transcriptional regulation of neuronal differentiation
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Transcriptomic analysis of skeletal muscle regeneration across mouse lifespan identifies altered stem cell states
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Data from: Comparative transcriptomic analysis of the evolution and development of flower size in Saltugilia (Polemoniaceae)
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Data from: Enhanced competitive advantage of invasive plants by growth-defense trade-off: Evidence from phytohormone metabolism and transcriptomic analysis
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Effects of acute exposure to polystyrene nanoplastics on the channel catfish larvae: Insights from energy metabolism and transcriptomic analysis
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Phylogenomic analysis of brachyuran crabs using transcriptome data reveals possible sources of conflicting phylogenetic relationships within the group
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Chromosome-Level genome assembly and transcriptome analysis of the ural owl, Strix uralensis Pallas, 1771
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Transcriptomic and metabolomic analysis identifies potential targets of HADHA lactylation in LPS-treated H9c2 cells
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Transcriptomic analysis of UBQLN2-ALS Drosophila
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Data from: Phylogenomic analysis of target enrichment and transcriptome data uncovers rapid radiation and extensive hybridization in slipper orchid genus Cypripedium L.
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Transcriptome analysis of invasive Gypsophila paniculata (baby's breath) populations from Michigan and Washington, USA.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.