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104
datasets available to search
ShareScore release 0.9.0
Dataset results
104 results for “functional annotation”
Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 2]
GEO Series GSE129417. Bos taurus. 6 samples. Type: Methylation profiling by high throughput sequencing.
Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (RNA-Seq)
GEO Series GSE158412. Gallus gallus; Bos taurus; Sus scrofa. 48 samples. Type: Expression profiling by high throughput sequencing.
Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (ATAC-Seq)
GEO Series GSE158414. Bos taurus; Sus scrofa. 31 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (H3K4me1 ChIP-Seq)
GEO Series GSE158427. Sus scrofa; Gallus gallus; Bos taurus. 48 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deep sequencing and functional annotation reveal miRNAs implicated in the cell senescence phenotype
GEO Series GSE27404. Homo sapiens. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Rapid functional annotation of native enhancers in embryonic stem cells with a Neisseria meningitidis CRISPR-Cas9 system (ATAC-Seq)
GEO Series GSE64058. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ICE-A: A chromatin interaction-based tool for improved annotation of distal cis-regulatory elements reveals novel regulatory functions of lineage-restricted transcription factors in lymphocytic develo
GEO Series GSE279957. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Manual curation for improved genome annotation of the functionally extinct northern white rhinoceros (Ceratotherium simum cottoni)
GEO Series GSE300824. Ceratotherium simum simum. 8 samples. Type: Expression profiling by high throughput sequencing.
Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 3]
GEO Series GSE129418. Bos taurus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cisplatin-induced decrease of mRNA length reveals functional and translated intronic-polyadenylation isoforms in the annotated 5’-untranslated region of genes [total RNA-seq]
GEO Series GSE180854. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Cisplatin-induced decrease of mRNA length reveals functional and translated intronic-polyadenylation isoforms in the annotated 5’-untranslated region of genes [ISO-seq]
GEO Series GSE180918. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Functional annotation hypothetical proteins: a world to be explored in drug development in Trypanosomatids - Oligomeric AlphaFold Models
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Rapid functional annotation of native enhancers in embryonic stem cells with a Neisseria meningitidis CRISPR-Cas9 system
GEO Series GSE64059. Mus musculus. 17 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
Functional annotation of transcriptional factors transactivation domains
GEO Series GSE114387. Drosophila melanogaster. 8 samples. Type: Other.
Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 4]
GEO Series GSE129419. Bos taurus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Toward a functional annotation of the human genome using artificial transcription factors
GEO Series GSE677. Homo sapiens. 132 samples. Type: Expression profiling by array.
Excavation of biomarker candidates for the diagnosis of Talaromyces marneffei infection via genome-wide prediction and functional annotation of secreted proteins
GEO Series GSE266975. Talaromyces marneffei. 3 samples. Type: Expression profiling by high throughput sequencing.
De novo transcriptome assembly and functional annotation for Y-organs of the blue crab (Callinectes sapidus), and analysis of differentially expressed genes during pre-molt
GEO Series GSE154560. Callinectes sapidus. 4 samples. Type: Expression profiling by high throughput sequencing.
Precision CRISPR annotation of the functional enhancer landscape in primary human T cells
GEO Series GSE310188. Homo sapiens. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Gene expression and functional annotation of choroid plexus epithelium failure in Alzheimer disease
GEO Series GSE61196. Homo sapiens. 21 samples. Type: Expression profiling by array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.