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123
datasets available to search
ShareScore release 0.9.0
Dataset results
123 results for “hydroxymethylation”
5-hydroxymethylation highlights the heterogeneity in keratinization and cell junctions in head and neck cancers
GEO Series GSE144034. Homo sapiens. 72 samples. Type: Methylation profiling by high throughput sequencing.
Investigation of the changes induce by inhibiting mitochondrial respiration on DNA methylation and hydroxymethylation in periosteal cells
GEO Series GSE198222. Mus musculus. 12 samples. Type: Methylation profiling by array.
DNA methylation and hydroxymethylation profiles were compared between mouse PGCLCs isolated from 6-day culture embryoid bodies, their precursor cells (ESCs, iPSCs, and EpiLCs), and E12.5 in vivo mouse
GEO Series GSE81175. Mus musculus. 43 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide mapping of DNA hydroxymethylation in osteoarthritic chondrocytes [expression]
GEO Series GSE64394. Homo sapiens. 7 samples. Type: Expression profiling by array.
Dynamic hydroxymethylation of DNA marks differentiation-driven enhancers
GEO Series GSE27436. Mus musculus. 19 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
DNA hydroxymethylation profiling of purple sea urchin (Strongylocentrotus purpuratus), european lancelet (Branchiostoma lanceolatum) and zebrafish (Danio rerio) using hMeDIP-seq
GEO Series GSE188332. Danio rerio; Strongylocentrotus purpuratus; Branchiostoma lanceolatum. 8 samples. Type: Methylation profiling by high throughput sequencing.
DNA methylation and hydroxymethylation characterize the identity of D1 and D2 striatal projection neurons
GEO Series GSE186572. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
DNA hydroxymethylation analysis for target regions in human smooth muscle cells.
GEO Series GSE163246. Homo sapiens. 8 samples. Type: Methylation profiling by high throughput sequencing.
Hydroxymethyl DNA-IP of genomic DNA for many different normal human tissues
GEO Series GSE33219. Homo sapiens. 14 samples. Type: Methylation profiling by genome tiling array.
Clonorchis sinensis infection alters the methylation and hydroxymethylation of hepatocellular carcinoma
GEO Series GSE284332. Homo sapiens. 16 samples. Type: Methylation profiling by high throughput sequencing.
Altered Hydroxymethylation is seen at regulatory regions in pancreatic cancer and regulates oncogenic pathways [MeDIP-seq]
GEO Series GSE97014. Homo sapiens. 2 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide analysis of DNA hydroxymethylation and methylation during epstein-barr virus infection.
GEO Series GSE84897. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Altered Ten Eleven Translocation Methylcytosine Dioxygenase Expression and DNA Hydroxymethylation in a Mouse Model of Prostate Cancer [hMeDIP-seq]
GEO Series GSE279076. Mus musculus. 4 samples. Type: Methylation profiling by high throughput sequencing.
Roles of DNA hydroxymethylation versus DNA formylation and carboxylation in neural stem cells [EM-seq]
GEO Series GSE287655. Mus musculus. 3 samples. Type: Methylation profiling by high throughput sequencing.
Obesity and dyslipidemia are associated with partially reversible modifications to DNA hydroxymethylation of apoptosis- and senescence-related genes in swine adipose-derived mesenchymal stem/stromal c
GEO Series GSE216953. Sus scrofa; Homo sapiens. 19 samples. Type: Methylation profiling by high throughput sequencing.
Methylation and Hydroxymethylation profile of zebrafish tet2 mutant
GEO Series GSE136761. Danio rerio. 12 samples. Type: Methylation profiling by high throughput sequencing.
Roles of DNA hydroxymethylation versus DNA formylation and carboxylation in neural stem cells
GEO Series GSE287657. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Tet-mediated DNA hydroxymethylation regulates retinal neurogenesis in zebrafish via cell-extrinsic signaling pathways
GEO Series GSE80134. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome wide DNA methylation and Hydroxymethylation of F1 mouse lung prenatally exposed to house dust mite
GEO Series GSE169355. Mus musculus. 8 samples. Type: Methylation profiling by high throughput sequencing.
Gene body DNA hydroxymethylation restricts magnitude of transcriptional changes during aging [hMeDIP]
GEO Series GSE221121. Mus musculus. 48 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.