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Text-fig. 9. Scatter diagram of m1 length vs SDQ for M. savini and Arvicola from different geographical provenances and ages. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 9. Scatter diagram of m1 length vs SDQ for M. savini and Arvicola from different geographical provenances and ages.
Text-fig. 7. Diagram showing the variation of the size (L) vs Time slices in m1s of M. savini and Arvicola from different geographical provenances. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 7. Diagram showing the variation of the size (L) vs Time slices in m1s of M. savini and Arvicola from different geographical provenances.
Text-fig. 8. Scatter diagram of SDQ vs A/L M. savini and Arvicola from different geographical provenances and ages. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 8. Scatter diagram of SDQ vs A/L M. savini and Arvicola from different geographical provenances and ages.
Text-fig. 6. Diagram showing the variation of the enamel pattern (index SDQ) vs Time slices in m1s of M. savini and Arvicola from different geographical provenances. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 6. Diagram showing the variation of the enamel pattern (index SDQ) vs Time slices in m1s of M. savini and Arvicola from different geographical provenances.
Text-fig. 5. Diagram showing the variation of Anteroconid length (index A/L) vs Time slices in m1s of M. savini and Arvicola from different geographical provenances. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 5. Diagram showing the variation of Anteroconid length (index A/L) vs Time slices in m1s of M. savini and Arvicola from different geographical provenances.
Text-fig. 1. SDQ vs stratigraphic time in samples of Mimomys savini and Arvicola from various Italian and German localities (in brackets: sample size), showing a parallel trend starting from ca. 200 ka. From Maul et al. (1998b: fig. 4), modified. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 1. SDQ vs stratigraphic time in samples of Mimomys savini and Arvicola from various Italian and German localities (in brackets: sample size), showing a parallel trend starting from ca. 200 ka. From Maul et al. (1998b: fig. 4), modified.
Text-fig. 4. Location Map of the examined water vole localities. From Masini et al. (2007), modified. 1: Madrid, surroundings, 2: Graz, 3: Eisfeld, 4: Langen, 5: Delta Po, 6: Rovigo, 7: Ferrara, 8: Calabria, 9: Caverna degli Orsi, 10: Arma delle Manie, 11: Riparo Mochi, 12: Grotta di Castelcivita, 13: Grotta della Serratura, 14: Grotta del Romito, 15: Scario Grotta Grande, 16: Grotta di Cucigliana, 17: Upper Valdarno Campitello, 18: Riparo di Visogliano, 19: Isernia La Pineta, 20: Baume Gigny, 21: Baume Moula Guercy, 22: Grotte de L'Eglise, 23: Grotte-Abri Suard, 24: Grotte d'Artenac, 25: Pié Lombard, 26: Abri Vaufrey, 27: Grotte du Lazaret, 28: Abri Gaudry, 29: Pisede, 30: Euerwanger Bühl, 31: Kemathenhöhle, 32: Krockstein (Rübeland 1), 33: Burgtonna, 34: Parkhöhle (Weimar), 35: Stuttgart- Untertürkheim, 36: Taubach, 37: Ehringsdorf, 38: Plaidter-Hummerich, 39: Mosbach, 40: Petersbuch 1, 41: Bilzingsleben, 42: Miesenheim 1, 43: Voigtstedt, 44: Untermassfeld. See Table 1 for symbol explanations. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 4. Location Map of the examined water vole localities. From Masini et al. (2007), modified. 1: Madrid, surroundings, 2: Graz, 3: Eisfeld, 4: Langen, 5: Delta Po, 6: Rovigo, 7: Ferrara, 8: Calabria, 9: Caverna degli Orsi, 10: Arma delle Manie, 11: Riparo Mochi, 12: Grotta di Castelcivita, 13: Grotta della Serratura, 14: Grotta del Romito, 15: Scario Grotta Grande, 16: Grotta di Cucigliana, 17: Upper Valdarno Campitello, 18: Riparo di Visogliano, 19: Isernia La Pineta, 20: Baume Gigny, 21: Baume Moula Guercy, 22: Grotte de L'Eglise, 23: Grotte-Abri Suard, 24: Grotte d'Artenac, 25: Pié Lombard, 26: Abri Vaufrey, 27: Grotte du Lazaret, 28: Abri Gaudry, 29: Pisede, 30: Euerwanger Bühl, 31: Kemathenhöhle, 32: Krockstein (Rübeland 1), 33: Burgtonna, 34: Parkhöhle (Weimar), 35: Stuttgart- Untertürkheim, 36: Taubach, 37: Ehringsdorf, 38: Plaidter-Hummerich, 39: Mosbach, 40: Petersbuch 1, 41: Bilzingsleben, 42: Miesenheim 1, 43: Voigtstedt, 44: Untermassfeld. See Table 1 for symbol explanations.
Text-fig. 3. Scheme of measurement of the first molar of Mimomys and Arvicola adopted in the present work. L – maximal length, A – anteroconid length. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 3. Scheme of measurement of the first molar of Mimomys and Arvicola adopted in the present work. L – maximal length, A – anteroconid length.
Text-fig. 2. Phylogeography based on mitochondrial phylogeny showing several evolutionary lineages of Arvicola and the separation of the Italian lineage of Arvicola, currently A. italicus (lineage A1), from European and Euro-Asiatic groups. From Wust-Saucy (1998: fig. 27), modified. in Independent Water Vole (Mimomys Savini, Arvicola: Rodentia, Mammalia) Lineages In Italy And Central Europe
Text-fig. 2. Phylogeography based on mitochondrial phylogeny showing several evolutionary lineages of Arvicola and the separation of the Italian lineage of Arvicola, currently A. italicus (lineage A1), from European and Euro-Asiatic groups. From Wust-Saucy (1998: fig. 27), modified.
Dataset accompanying 'Diverse stem-chondrichthyan oral structures and evidence for an independently acquired acanthodid dentition'
<p>This dataset accompanies the manuscript 'Diverse stem-chondrichthyan oral structures and evidence for an independently acquired acanthodid dentition' and comprises the following items: </p> <p>- Acanthodes_NHMUK_PV_P.8065 PLY files</p> <p>- Acanthodes_NHMUK_PV_P.8065 raw data (TIFF stack)</p> <p>- Acanthodes_NHMUK_PV_P.8065 Mimics file</p> <p>- Acanthodopsis_NHMUK_PV_P.10383 PLY files</p> <p>- Acanthodopsis_NHMUK_PV_P.10383 TIFF stack</p> <p>- Acanthodopsis_NHMUK_PV_P.10383 Mimics file </p> <p>- Atopacanthus_NHMUK_PV_P.10978 PLY files</p> <p>- Atopacanthus_NHMUK_PV_P.10978 raw data (TIFF stack)</p> <p>- Atopacanthus_NHMUK_PV_P.10978 Mimics file</p> <p>- Ischnacanthus_NHMUK_PV_P.40124 PLY files</p> <p>- Ischnacanthus_NHMUK_PV_P.40124 raw data (TIFF stack)</p> <p>- Ischnacanthus_NHMUK_PV_P.40124 Mimics file</p> <p>- Taemasacanthus_erroli_NHMUK_PV_P33706 PLY files</p> <p>- Taemasacanthus_erroli_NHMUK_PV_P33706 raw data (VOL file)</p> <p>- Taemasacanthus_erolli_NHMUK_PV_P33706 Mimics file</p>
Data set accompanying the paper "Effective cell membrane tension is independent of polyacrylamide substrate stiffness"
<p>This data set contains the data presented in the publication "Effective cell membrane tension is independent of polyacrylamide substrate stiffness". It consists of optical tweezers data and traction force microscopy data of 3T3 fibroblasts and Xenopus retinal ganglion cells on several different substrates.</p>
Datasets and Model for "Age-Independent Oceanic Plate Thickness and Asthenosphere Melting from SS Precursor Imaging"
<p>The Earth’s asthenosphere is a mechanically weak layer characterized by low seismic velocity and high attenuation. The nature of this layer has been strongly debated. In this study, we process twelve years of seismic data recorded at the global seismological network (GSN) stations to investigate SS waves reflected at the upper and lower boundaries of this layer in global oceanic regions. We observe strong reflections from both the top and the bottom of the asthenosphere, dispersive across all major oceans. The average depths of the two discontinuities are 120 km and 255 km, respectively. The SS waves reflected at the lithosphere and asthenosphere boundary are characterized by anomalously large amplitudes, which require ∼12.5% reduction in seismic velocity across the interface. This large velocity drop can not be explained by a thermal cooling model but indicates 1.5%-2% localized melt in the oceanic asthenosphere. The depths of the two discontinuities show large variations, indicating that the asthenosphere is far from a homogeneous layer but likely associated with strong and heterogeneous small-scale convections in the oceanic mantle. The average depths of the two boundaries are largely constant across different age bands. In contrast to the half space cooling model, this observation supports the existence of a constant-thickness plate in oceanic regions with a complex and heterogeneous origin. This repository contains four datasets and one reference earth model from this study.</p>
Data for: Frond orientations with independent current indicators demonstrate the reclining rheotropic mode of life of several Ediacaran rangeomorph taxa
<p>Fossils from the deep-sea Ediacaran biotas of Newfoundland are among the oldest architecturally complex soft-bodied macroorganisms on Earth. Most organisms in the Mistaken Point-type biotas of Avalonia — particularly the fractal-branching frondose Rangeomorpha — have been traditionally interpreted as living erect within the water column during life. However, due to the scarcity of documented physical sedimentological proxies associated with fossiliferous beds, Ediacaran paleocurrents have been inferred in some instances from the preferential orientation of fronds. This calls into question the relationship between frond orientation and paleocurrents. In this study, we present an integrated approach from a newly described fossiliferous surface (the "Melrose Surface" in the Fermeuse Formation at Melrose, on the southern portion of the Catalina Dome in the Discovery UNESCO Global Geopark) combining: (1) physical sedimentological evidence for paleocurrent direction in the form of climbing ripple cross lamination, and (2) a series of statistical analyses based on modified polythetic and monothetic clustering techniques reflecting the circular nature of the recorded orientation of <em>Fractofusus</em> <em>misrai</em> specimens. This study demonstrates the reclining rheotropic mode of life of the Ediacaran rangeomorph taxon <em>Fractofusus</em> <em>misrai</em> and presents preliminary inferences suggesting a similar mode of life for <em>Bradgatia</em> sp. and <em>Pectinifrons</em> <em>abyssalis</em> based on qualitative evidence. These results advocate for the consideration of an alternative conceptual hypothesis for the position of life of Ediacaran organisms in which they are interpreted as having lived reclined on the seafloor, in the position that they are preserved.</p>
A Model-Independent Determination of Red Noise in Pulsar Timing Arrivals
<p>Data files for Reyes & Bernido, submitted, 2023, A Model-Independent Determination of Red Noise in Pulsar Timing Arrivals. </p> <p>In this work, we analyze the pulsar timing data from the North American Nanohertz Observatory for Gravitational Waves (NANOGrav; Arzoumanian et al 2018). For 23 pulsars with 820 MHz data, we show that an evaluation of the mean square deviation (MSD) and probability distribution (PDF) of timing residuals can provide a straightforward way of determining the presence of red noise. The model-free method presented could complement the normally more sophisticated model-dependent way of determining red noise in timing residuals.</p> <p>Data available here:</p> <p>- ts.zip - uniform time-series of timing residuals for the 23 pulsars</p> <p>- msd.zip - mean square deviation vs. lag time for the 23 pulsars</p> <p>- pdf.zip - probability distributions for lag times equal to 30, 150, 300, 900, and 1200 days for the 23 pulsars</p>
Increased water temperature and turbidity act independently to alter social behaviour in guppies (Poecilia reticulata)
<p>Changes in environmental conditions can shift the costs and benefits of aggregation or interfere with the sensory perception of near neighbours. This affects group cohesion with potential impacts on the benefits of collective behaviour such as reduced predation risk. Organisms are rarely exposed to one stressor in isolation, yet there are only a few studies exploring the interactions between multiple stressors and their effects on social behaviour. Here we tested the effects of increased water temperature and turbidity on refuge use and three measures of aggregation in guppies (<em>Poecilia</em> <em>reticulata</em>), increasing temperature and turbidity in isolation or in combination. When stressors were elevated in isolation, the distribution of fish within the arena as measured by the index of dispersion became more aggregated at higher temperatures but less aggregated when turbidity was increased. Another measure of cohesion at the global scale, the mean inter-individual distance, also indicated that fish were less aggregated in turbid water. This is likely due to turbidity acting as a visual constraint, as there was no evidence of a change in risk perception as refuge use was not affected by turbidity. Fish decreased refuge use and were closer to their nearest neighbour at higher temperatures. However, nearest-neighbour distance was not affected by turbidity, suggesting that local-scale interactions can be robust to the moderate increase in turbidity used here (5 NTU) compared to other studies which show a decline in shoal cohesion at higher turbidity (>100 NTU). We did not observe any significant interaction terms between the two stressors, indicating no synergistic or antagonistic effects. Our study suggests that the effects of environmental stressors on social behaviour may be unpredictable and dependent on the metric used to measure cohesion, highlighting the need for mechanistic studies to link behaviour to the physiology and sensory effects of environmental stressors.</p>
Soil organic carbon models need independent time-series validation for reliable prediction
<p>Supplementary Data 1 to the paper: Soil organic carbon models need independent time-series validation for reliable prediction</p> <p>By: Le Noë, J., Manzoni, S., Abramoff, R.Z., Bölscher, T., Bruni, E., Cardinael, R., Ciais, P., Chenu, C., Clivot, H., Derrien, D., Ferchaud, F., Garnier, P., Goll, D., Lashermes, G., Martin, M.P., Rasse, D., Rees, F., Sainte-Marie, J., Salmon, E., Schiedung, M., Schimel, J., Wieder, W.R., Abiven, S., Barré, P., Cécillon, L., Guenet, B.</p>
Phylogenomics illuminates the phylogeny of flower weevils (Curculioninae) and reveals ten independent origins of brood-site pollination mutualism in true weevils
<p><strong>Phylogenomics illuminates the phylogeny of flower weevils (Curculioninae) and reveals ten independent origins of brood-site pollination mutualism in true weevils (142 /150 characters)</strong></p> <p>Haran J.<sup>1*</sup>, Li X.<sup>2,3,4*</sup>, Allio R.<sup>5*</sup>, Shin S.<sup>3,4,6</sup>, Benoit L.<sup>1</sup>, Oberprieler R.G.<sup>7</sup>, Farrell B.D.<sup>8</sup>, Brown S.D.J.<sup>9</sup>, Leschen R.A.B.<sup>10</sup>, Kergoat G.J.<sup>5</sup> & McKenna D.D.<sup>3,4</sup></p> <p>* Equal contribution</p> <p> </p> <p><strong>Affiliations</strong></p> <p><sup>1</sup> CBGP, CIRAD, INRAE, IRD, Institut Agro, Univ. Montpellier, Montpellier, France. ORCID: 0000-0001-9458-3785 (JH); 0000-0003-3740-5346 (LB)</p> <p><sup>2</sup> Department of Entomology, College of Plant Protection, China Agricultural University, Beijing 100193, China. ORCID: 0000-0002-0622-2064 (XL)</p> <p><sup>3</sup> Department of Biological Sciences, University of Memphis, Memphis, TN 38152 ORCID: 0000-0002-7823-8727 (DDM)</p> <p><sup>4</sup> Center for Biodiversity Research, University of Memphis, Memphis, TN 38152</p> <p><sup>5</sup> CBGP, INRAE, IRD, CIRAD, Institut Agro, Univ. Montpellier, Montpellier, France. ORCID: 000-0003-3885-5410 (RA); 0000-0002-8284-6215 (GJK)</p> <p><sup>6</sup> School of Biological Sciences, Seoul National University, Seoul 08826, Republic of Korea.</p> <p>ORCID: 0000-0002-4258-8661 (SS)</p> <p><sup>7</sup> CSIRO, Australian National Insect Collection, GPO Box 1700, Canberra, ACT 2601, Australia. ORCID: 0000-0002-1837-580X (RGO)</p> <p><sup>8</sup> Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA. ORCID: 0000-0002-6843-0539 (BDF)</p> <p><sup>9</sup> Bio-Protection Research Centre, P.O. Box 85084, Lincoln University, Lincoln 7647, New Zealand. Current address: The New Zealand Institute for Plant and Food Research, Mount Albert Research Centre, Private Bag 92169, Auckland 1142, New Zealand. ORCID: 0000-0001-7112-421X (SDJB)</p> <p><sup>10</sup> Manaaki Whenua - Landcare Research, PB 92170, Auckland, New Zealand. ORCID: 0000-0001-8549-8933 (RABL)</p> <p> </p> <p><strong>Abstract</strong></p> <p>Weevils are an unusually species-rich group of phytophagous insects, for which there is increasing evidence of frequent involvement in brood-site pollination. This study examines phylogenetic patterns in the emergence of brood-site pollination mutualism among one of the most speciose beetle groups, the flower weevils (subfamily Curculioninae). We analyzed a novel phylogenomic dataset consisting of 214 nuclear loci for 202 weevil species, with a sampling that mainly includes flower weevils as well as representatives of all major lineages of true weevils (Curculionidae). Our phylogenomic analyses establish a uniquely comprehensive phylogenetic framework for Curculioninae and provide new insights into the relationships among lineages of true weevils. Based on this phylogeny, statistical reconstruction of ancestral character states revealed at least ten independent origins of brood-site pollination in higher weevils through transitions from ancestral associations with reproductive structures in the larval stage. Broadly, our results illuminate the unexpected frequency with which true weevils — typically specialized phytophages and hence antagonists of plants — have evolved mutualistic interactions of ecological significance that are key to both weevil and plant evolutionary fitness and thus a component of their deeply intertwined macroevolutionary success.</p> <p> </p> <p><strong><em>Figures </em></strong></p> <p><strong>Figure 1 (part I).</strong> Maximum-likelihood tree resulting from analyses of 214 nuclear protein-coding genes (focus on the CEGH clade and outgroups). Support at node refers to SH-aLRT values ≥ 80% and uBV ≥ 95% (**). Single * refer to SH-aLRT values ≥ 80% only. Clades with black branches and highlighted in blue are classified in Curculioninae sensu Caldara et al. (2014). Taxa displayed on the left: 1 - Hypsomus sp. (Styphlini); 2 - Myllorhinus sp. (Storeini s. lat.); 3 - Encosmia sp. (Storeini s. lat.).</p> <p><strong>Figure 1 (part II).</strong> Maximum-likelihood tree resulting from analyses of 214 nuclear protein-coding genes (focus on the CCCMS clade). Node support values refer to SH-aLRT values ≥ 80% and uBV ≥ 95% (**). Single * refer to SH-aLRT values ≥ 80% only. Clades with black branches and highlighted in blue are classified in Curculioninae sensu Caldara et al., (2014). Clades highlighted in darker blue contain genera engaged in brood-site pollination mutualism and the corresponding genera are highlighted in orange (higher taxonomic rank when specific genera are not included in the tree). Other lineages of the CCCMS clade are in bold font. Taxa displayed on the right: 1 - Tychius sp. (Tychiini); 2 - Anthonomus sp. (Athonomini); 3 - Tachyerges sp. (Rhamphini); 4 - Derelomus sp. (Derelomini); 5 - Cionus sp. (Cionini); 6 - Daeneus sp. (Ochyromerini); 7 - Meriphus sp. (Eugnomini); 8 - Archarius sp. (Curculionini); 9 - Dorytomus sp. (Ellescini); 10 - Cleopomiarus sp. (Mecinini).</p> <p><strong>Figure 2.</strong> Results of the ASE analysis of larval tissue specialization carried out on the CCCMS clade, with an ER model and using a continuous-time reversible Markov model with 1000 simulations. In addition, red arrows are used to underline the independent origins of brood-site mutualism inferred in another ASE analysis (see Fig. S4). Two clades including brood-site pollinator genera that were not sampled in our study are also highlighted using red rectangles.</p> <p> </p> <p><strong><em>Additional files</em></strong></p> <p><strong>Figure S1</strong>. Full ML tree with support values.</p> <p><strong>Figure S2</strong>. Support for ML analyses.</p> <p><strong>Figure S3</strong>. Results of the ASE analysis of the evolution of the tissue specialization by weevil larvae in the CCCMS clade, with an ER model and using a continuous time-reversible Markov model with 1000 simulations. </p> <p><strong>Figure S4</strong>. Results of the ASE analysis on the evolution of brood-site pollination in the CCCMS clade, with an ER model and using a continuous time-reversible Markov model with 1000 simulations.</p> <p> </p> <p><strong><em>Zenodo supplementary files</em></strong></p> <p><strong>AHE_pipeline.txt </strong>shows the detailed step-by-step script used to generate the phylogeny obtained in this study from raw sequencing data.</p> <p><strong>ASE Analyses.zip</strong> contains the script and the associated raw results of the ASE analyses.</p> <p><strong>Cole_tcas_probes.fasta</strong> contains the Coleopteran probes used.</p> <p><strong>IBA results.zip</strong> contains IBA results.</p> <p><strong>IQ-TREE files.zip</strong> contains input and output files of the IQ-TREE analysis.</p> <p><strong>Scripts.zip</strong> contains the scripts associated with the file AHE_pipeline.txt.</p> <p> </p>
Photonic amorphous I-WP networks create angle-independent colors in Sternotomis virescens longhorn beetles
<p>Datasets supporting the manuscript "Photonic amorphous I-WP-like networks create angle-independent colors in <em>Sternotomis virescens</em> longhorn beetles" (DOI: 10.1002/adfm.202302720).</p> <p>Datasets are named according to the corresponding figures and contain raw data, with data related to each panel located in sub-folders named according to the panel. Further information about the data is found in README files for the entire dataset and each folder.</p>
Spatiotemporally independent heavy precipitation events for the state of Hesse (Germany)
<p>This data set contains a collection of spatiotemporally independent convective precipitation objects for the German state of Hessen. The data set was generated on the basis of the <em>RADKLIM‑YW Version 2017.002 (</em>https://doi.org/10.5676/DWD/RADKLIM_YW_V2017.002) radar precipitation data of the German Weather Service (DWD). It is grouped into precipitation duration stages of 15, 30, 45, 60, 75 and 90 minutes as well as a spatial aggregation of 9 and 25 grid cells. This results in 12 separate event lists. </p>
Within and between population comparisons suggest independently acting selection maintaining parallel clines in Scots pine (Pinus sylvestris)
<p>Parallel clines in traits related to adaptation in a species can be due to independent selection on a pair of traits, or due to selection in one trait resulting in a parallel cline in a correlated trait. To distinguish between the mechanisms giving rise to parallel adaptive population divergence of multiple traits along an environmental gradient we need to study variation, correlations, and selective forces within individual populations along the gradient. In many tree species, budset timing forms a latitudinal cline, and parallel clinal variation is also found in other seedling traits, such as first year height and fall frost injury. In this study, we set up a common garden experiment with open pollinated progeny from natural populations of Scots pine (<em>Pinus sylvestris</em>), with one large sample from single population (500 families) and smaller samples from across a latitudinal gradient. Budset timing, first year height and induced fall frost injury were first measured in a greenhouse. The seedlings were then planted in the field, where survival and height were measured at the age of nine years as fitness proxies. We compared between and within population variation and genetic correlations of these three seedling traits, and estimated selection gradients at the family level in our main population, taking into account the potential effects of seed weight. Between population genetic correlations between seedling traits were high (0.76-0.95). Within population genetic correlations in the main population were lower (0.14-0.35), as in other populations (0.10-0.39). Within population, extensive adaptive variation persists in the seedling traits, in line with rather weak selection gradients, yet maintaining the clines. Although our sampling does not cover the whole cline equally, the results suggest that the individual clines in these traits are maintained by largely independently acting selection, which results in fewer constraints in adaptation under changing climate.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.