Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
183
datasets available to search
ShareScore release 0.9.0
Dataset results
183 results for “infection dynamics”
Data from: Health trajectories reveal the dynamic contributions of host genetic resistance and tolerance to infection outcome
Open the record for dataset details and reuse information.
Reactivation of latent infections with migration shapes population-level disease dynamics
Open the record for dataset details and reuse information.
Leapfrog dynamics in phage-bacteria coevolution revealed by joint analysis of cross-infection phenotypes and whole genome sequencing
Open the record for dataset details and reuse information.
Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with Pseudomonas syringae pv. tomato DC3000.
GEO Series GSE56094. Arabidopsis thaliana. 156 samples. Type: Expression profiling by array.
Chromatin accessibility dynamics of Chlamydia-infected epithelial cells
GEO Series GSE132448. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Vagal TRPV1+ sensory neurons regulate myeloid cell dynamics and protect against influenza virus infection
GEO Series GSE296065. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Linking cell dynamics with coexpression networks to characterize key events in chronic virus infections
GEO Series GSE123134. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Novel JAZ co-operativity and unexpected JA dynamics underpin Arabidopsis defence responses to Pseudomonas syringae infection
GEO Series GSE72461. Arabidopsis thaliana. 10 samples. Type: Expression profiling by high throughput sequencing.
Single Nucleus Multiomic Profiling Reveals Age-Dynamic Regulation of Host Genes Associated with SARS-CoV-2 Infection
GEO Series GSE161383. Homo sapiens. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Competitive Inhibition and Mutualistic Growth in Polymicrobial Infections: Deciphering Staphylococcus aureus – Acinetobacter baumannii Interaction Dynamics
GEO Series GSE250252. Acinetobacter baumannii A118; Staphylococcus aureus subsp. aureus USA300. 16 samples. Type: Expression profiling by high throughput sequencing.
The within-host dynamics of infection in trans-generationally primed beetles
GEO Series GSE95387. Tribolium castaneum. 48 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide DNA methylation analysis reveals dynamic changes in metabolic and immune-regulatory pathways during uncontrolled SIV infection
GEO Series GSE143708. Macaca mulatta; Homo sapiens; Chlorocebus sabaeus. 77 samples. Type: Methylation profiling by genome tiling array.
Revealing parallel host-pathogen transcriptional dynamics using sorted subpopulations and single, Candida albicans infected macrophages
GEO Series GSE111731. Candida albicans; Mus musculus. 306 samples. Type: Expression profiling by high throughput sequencing.
RNA Atlas of Bacterial Human Pathogens Uncovers Stress Dynamics Linked to Bacterial Infections
GEO Series GSE152295. Campylobacter jejuni; Francisella tularensis; Acinetobacter baumannii; Neisseria gonorrhoeae; Escherichia coli; Shigella flexneri; Aggregatibacter actinomycetemcomitans; Haemophilus influenzae; Staphylococcus aureus subsp. aureus MRSA252; Staphylococcus aureus subsp. aureus MSSA476; Helicobacter pylori; Enterococcus faecalis; Neisseria meningitidis; Staphylococcus epidermidis; Streptococcus pyogenes; Listeria monocytogenes; Salmonella enterica; Achromobacter xylosoxidans; Borreliella burgdorferi; Pseudomonas aeruginosa; Legionella pneumophila; Klebsiella pneumoniae; Yersinia pseudotuberculosis; Vibrio cholerae; Streptococcus suis; Streptococcus agalactiae; Streptococcus pneumoniae; Mycobacterium tuberculosis; Burkholderia pseudomallei. 1122 samples. Type: Expression profiling by high throughput sequencing.
Persistent Activation and Refractoriness of the Hepatic Interferon System in HBV-HDV Infection Determines Viral Dynamics and Therapeutic Response
GEO Series GSE205567. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Dynamics and Characterization of Small RNAs of Virus and Host Origin from Wheat Streak Mosaic Virus- and/or Triticum Mosaic Virus-infected Susceptible and Temperature-Sensitive Resistant Wheat Cultiva
GEO Series GSE54026. Triticum aestivum. 16 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Multiomics analysis unveils key biomarkers during dynamic progress of IAV infection in mice
GEO Series GSE292329. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing.
Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection
GEO Series GSE286452. Mus musculus. 12 samples. Type: Other.
Lung structural cell dynamics are altered by influenza virus infection experience leading to rapid immune protection following viral re-challenge
GEO Series GSE278132. Mus musculus. 35 samples. Type: Expression profiling by high throughput sequencing.
Temporal Dynamics of HCMV Gene Expression in Lytic and Latent Infections
GEO Series GSE193467. Human betaherpesvirus 5; Homo sapiens. 92 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.