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124
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Dataset results
124 results for “methanol”
RNA-seq data of Methylorubrum extorquens AM1 wild-type and methanol-adapted strains [RNA-seq]
GEO Series GSE297705. Methylorubrum extorquens. 24 samples. Type: Expression profiling by high throughput sequencing.
Methanol fixed feeder layers altered the pluripotency and metabolism of bovine pluripotent stem cells
GEO Series GSE199731. Bos taurus. 6 samples. Type: Expression profiling by high throughput sequencing.
Effect of performing SLAM-seq chemistry in methanol fixed cells versus standard tube processing on quantification bias in nucleotide conversion RNA-seq data
GEO Series GSE253370. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Mouse brain tissue after methanol and normal saline treatment
GEO Series GSE58303. Mus musculus. 8 samples. Type: Expression profiling by array.
Contrasting in vitro and in vivo methanol oxidation activities of lanthanide-dependent alcohol dehydrogenases XoxF1 and ExaF from Methylobacterium extorquens AM1
GEO Series GSE125593. Methylorubrum extorquens AM1. 5 samples. Type: Expression profiling by high throughput sequencing.
Methanol and Methylamine Utilization Pathways in Methyloversatilis universalis FAM5: Genome Wide Gene Expression and Mutagenesis Studies
GEO Series GSE63822. Methyloversatilis universalis FAM5. 4 samples. Type: Expression profiling by high throughput sequencing.
Identification of two mutations increasing the methanol tolerance of Corynebacterium glutamicum
GEO Series GSE71590. Corynebacterium glutamicum; Corynebacterium glutamicum ATCC 13032. 7 samples. Type: Expression profiling by array.
Figure 3 from: Warsi W, Jaswir I, Ahmed QU, Mahfudh N, bin Mohd. Nawi MS, Rohman A, Khatib A (2024) Morphological, teratogenic and behavioral evaluations of Gelidium spinosum methanol extract on zebrafish embryos. Pharmacia 71: 1-10. https://doi.org/10.3897/pharmacia.71.e109918
Figure 3 The effect of various dosages of GsME on zebrafish embryos heart rate
Figure 1 from: Warsi W, Jaswir I, Ahmed QU, Mahfudh N, bin Mohd. Nawi MS, Rohman A, Khatib A (2024) Morphological, teratogenic and behavioral evaluations of Gelidium spinosum methanol extract on zebrafish embryos. Pharmacia 71: 1-10. https://doi.org/10.3897/pharmacia.71.e109918
Figure 1 Effect of GsME on mortality rate (%) at 1, 2, 3 and 4 dpf, n = 20.
Figure 5 from: Warsi W, Jaswir I, Ahmed QU, Mahfudh N, bin Mohd. Nawi MS, Rohman A, Khatib A (2024) Morphological, teratogenic and behavioral evaluations of Gelidium spinosum methanol extract on zebrafish embryos. Pharmacia 71: 1-10. https://doi.org/10.3897/pharmacia.71.e109918
Figure 5 GC-MS analysis of phytoconstituents in GsME.
Red Cell Distribution Width as a Predictor of Mortality in Acute Methanol Poisoning
ClinicalTrials.gov study NCT04064801. IPD Sharing: NO. Countries: 1. Publications: 0.
Erythropoietin in Methanol Associated Optic Neuropathy: A Phase-2 Clinical Trial (EPO-MAON Study)
ClinicalTrials.gov study NCT02376881. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
The Use of Isocapnic Hyperventilation (iHV) for Treatment of Methanol Poisoned Patients
ClinicalTrials.gov study NCT06173817. IPD Sharing: YES. Countries: 1. Publications: 0.
A Study on Bedside Formate Assay as a Diagnostic Tool in Methanol Poisoning
ClinicalTrials.gov study NCT06881641. IPD Sharing: UNDECIDED. Countries: 2. Publications: 0.
Pichia angusta cells glucose- vs methanol-grown
GEO Series GSE19036. Ogataea polymorpha NCYC 495 leu1.1. 8 samples. Type: Expression profiling by array.
Effect of methanol fixation on single-cell RNA sequencing data
GEO Series GSE150993. Homo sapiens. 346 samples. Type: Expression profiling by high throughput sequencing.
TES/Aura L2 Methanol Nadir V008
TL2MTLN_8 is the Tropospheric Emission Spectrometer (TES)/Aura Level 2 Methanol Nadir Version 8 data product. TES was an instrument aboard NASA's Aura satellite and was launched from California on July 15, 2004. Data collection for TES is complete. TES Level 2 data contain retrieved species (or temperature) profiles at the observation targets and the estimated errors. The geolocation, quality, and other data (e.g., surface characteristics for nadir observations) were also provided. L2 modeled spectra were evaluated using radiative transfer modeling algorithms. The process, referred to as retrieval, compared observed spectra to the modeled spectra and iteratively updated the atmospheric parameters. L2 standard product files included information for one molecular species (or temperature) for an entire global survey or special observation run. A global survey consisted of a maximum of 16 consecutive orbits.Nadir observations, which point directly to the surface of the Earth, are different from limb observations, which are pointed at various off-nadir angles into the atmosphere. Nadir and limb observations were added to separate L2 files, and a single ancillary file was composed of data that are common to both nadir and limb files. A Nadir sequence within the TES Global Survey was a fixed number of observations within an orbit for a Global Survey. Prior to April 24, 2005, it consisted of two low resolution scans over the same ground locations. After April 24, 2005, Global Survey data consisted of three low resolution scans. The Nadir standard product consists of four files, where each file is composed of the Global Survey Nadir observations from one of four focal planes for a single orbit, i.e. 72 orbit sequences. The Global Survey Nadir observations only used a single set of filter mix. A Global Survey consisted of observations along 16 consecutive orbits at the start of a two day cycle, over which 3,200 retrievals were performed. Each observation was the input for retrievals of species Volume Mixing Ratios (VMRs), temperature profiles, surface temperature, and other data parameters with associated pressure levels, precision, total error, vertical resolution, total column density, and other diagnostic quantities. Each TES Level 2 standard product reported information in a swath format conforming to the HDF-EOS Aura File Format Guidelines. Each Swath object was bounded by the number of observations in a global survey and a predefined set of pressure levels, representing slices through the atmosphere. Each standard product could have had a variable number of observations depending upon the Global Survey configuration and whether averaging was employed. Also, missing or bad retrievals were not reported. Further, observations were occasionally scheduled on non-global survey days. In general they were measurements made for validation purposes or with highly focused science objectives. Those non-global survey measurements were referred to as “special observations.”A Limb sequence within the TES Global Survey was three high-resolution scans over the same limb locations. The Limb standard product consists of four files, where each file is composed of the Global Survey Limb observations from one of four focal planes for a single orbit, i.e. 72 orbit sequences. The Global Survey Limb observations used a repeating sequence of filter wheel positions. Special Observations could only be scheduled during the 9 or 10 orbit gaps in the Global Surveys, and were conducted in any of three basic modes: stare, transect, step-and-stare. The mode used depended on the science requirement. Each limb observation Limb 1, Limb 2 and Limb 3, were processed independently. Thus, each limb standard product consisted of three sets where each set consisted of 1,152 observations. For TES, the swath object represented one of these sets. Thus, each limb standard product consisted of three swath objects, one for each observation, Limb 1, Limb 2, and Limb 3. The organization of data within the Swath object was based on a superset of the Upper Atmosphere Research Satellite (UARS) pressure levels used to report concentrations of trace atmospheric gases. The reporting grid was the same pressure grid used for modeling. There were 67 reporting levels from 1211.53 hPa, which allowed for very high surface pressure conditions, to 0.1 hPa, about 65 km. In addition, the products reported values directly at the surface when possible or at the observed cloud top level. Thus in the Standard Product files, each observation could potentially contain estimates for the concentration of a particular molecule at 67 different pressure levels within the atmosphere. However, for most retrieved profiles, the highest pressure levels were not observed due to a surface at lower pressure or cloud obscuration. For pressure levels corresponding to altitudes below the cloud top or surface, where measurements were not possible, a fill value was applied. To minimize the duplicatio
TES/Aura L2 Methanol Nadir Special Observation V008
TL2MTLNS_8 is the Tropospheric Emission Spectrometer (TES)/Aura Level 2 Methanol Nadir Special Observation Version 8 data product. TES was an instrument aboard NASA's Aura satellite and was launched from California on July 15, 2004. Data collection for TES is complete. TES Level 2 data contains retrieved species (or temperature) profiles at the observation targets and the estimated errors. The geolocation, quality, and other data (e.g., surface characteristics for nadir observations) were also provided. L2 modeled spectra were evaluated using radiative transfer modeling algorithms. The process, referred to as retrieval, compared observed spectra to the modeled spectra and iteratively updated the atmospheric parameters. L2 standard product files included information for one molecular species (or temperature) for an entire global survey or special observation run. A global survey consisted of a maximum of 16 consecutive orbits.A nadir sequence within the TES Global Survey was a fixed number of observations within an orbit for a Global Survey. Prior to April 24, 2005, it consisted of two low resolution scans over the same ground locations. After April 24, 2005, Global Survey data consisted of three low resolution scans. The Nadir standard product consisted of four files, where each file was composed of the Global Survey Nadir observations from one of four focal planes for a single orbit, i.e. 72 orbit sequences. The Global Survey Nadir observations only used a single set of filter mix. A Global Survey consisted of observations along 16 consecutive orbits at the start of a two day cycle, over which 3,200 retrievals were performed. Each observation was the input for retrievals of species volume mixing ratios (VMRs), temperature profiles, surface temperature and other data parameters with associated pressure levels, precision, total error, vertical resolution, total column density, and other diagnostic quantities. Each TES Level 2 standard product reported information in a swath format conforming to the HDF-EOS Aura File Format Guidelines. Each Swath object was bounded by the number of observations in a global survey and a predefined set of pressure levels representing slices through the atmosphere. Each standard product could have had a variable number of observations depending upon the Global Survey configuration and whether averaging is employed. Also, missing or bad retrievals were not reported. The organization of data within the Swath object was based on a superset of the Upper Atmosphere Research Satellite (UARS) pressure levels that was used to report concentrations of trace atmospheric gases. The reporting grid was the same pressure grid used for modeling. There were 67 reporting levels from 1211.53 hPa, which allowed for very high surface pressure conditions, to 0.1 hPa, about 65 km. In addition, the products reported values directly at the surface when possible or at the observed cloud top level. Thus in the Standard Product files each observation could have potentially contained estimates for the concentration of a particular molecule at 67 different pressure levels within the atmosphere. However, for most retrieved profiles, the highest pressure levels were not observed due to a surface at lower pressure or cloud obscuration. For pressure levels corresponding to altitudes below the cloud top or surface, where measurements were not possible, a fill value was applied.To minimize the duplication of information between the individual species standard products, data fields common to each species (such as spacecraft coordinates, emissivity, and other data fields) have been collected into a separate standard product, termed the TES L2 Ancillary Data product (ESDT short name: TL2ANC). Users of this product should also obtain the Ancillary Data product.
C1 metabolism in Corynebacterium glutamicum: an endogenous pathway for oxidation of methanol to carbon dioxide
GEO Series GSE49936. Corynebacterium glutamicum ATCC 13032. 5 samples. Type: Expression profiling by array.
Systems-level analysis provides insights on methanol-based production of l-glutamate and its decarboxylation product γ-aminobutyric acid by Bacillus methanolicus
GEO Series GSE277855. Bacillus methanolicus. 12 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.